Genomic map of Lactococcus phage 936 group phage Phi40 (KP793127)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793127
Definition
Lactococcus phage 936 group phage Phi40, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
31631
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
34.87
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM64386.1 KP793127_p44 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25199 25699
ALM64343.1 KP793127_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 260 784
ALM64394.1 KP793127_p52 hypothetical protein phrog_1656 unknown function unknown function -1 29425 29613
ALM64353.1 KP793127_p11 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7450 7947
ALM64362.1 KP793127_p20 tail associated lysin phrog_1432 tail associated lysin tail 1 15475 16602
ALM64380.1 KP793127_p38 hypothetical protein phrog_56 DNA methyltransferase other -1 22290 23231
ALM64357.1 KP793127_p14 major tail protein extension phrog_3791 major tail protein tail 1 8644 10174
ALM64387.1 KP793127_p45 hypothetical protein phrog_1449 unknown function unknown function -1 25790 25963
ALM64389.1 KP793127_p47 hypothetical protein phrog_2228 unknown function unknown function -1 26297 26683
ALM64395.1 KP793127_p53 middle expressed protein 1 phrog_1952 unknown function unknown function 1 29744 29872
ALM64352.1 KP793127_p10 strucural protein 2 phrog_1429 virion structural protein head and packaging 1 7139 7453
ALM64348.1 KP793127_p6 portal protein phrog_12 portal protein head and packaging 1 4046 5164
ALM64344.1 KP793127_p2 DNA methylase phrog_67 DNA methyltransferase other 1 781 1629
ALM64385.1 KP793127_p43 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24648 25214
ALM64368.1 KP793127_p26 hypothetical protein phrog_5087 unknown function unknown function -1 19019 19276
ALM64346.1 KP793127_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2119 3741
ALM64371.1 KP793127_p29 hypothetical protein phrog_3389 unknown function unknown function -1 19840 20013
ALM64376.1 KP793127_p34 hypothetical protein phrog_1509 unknown function unknown function -1 20941 21198
ALM64393.1 KP793127_p51 hypothetical protein singleton unknown function unknown function -1 28303 28563
ALM64382.1 KP793127_p40 hypothetical protein phrog_1317 unknown function unknown function -1 23551 24060
ALM64384.1 KP793127_p42 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24285 24644
ALM64383.1 KP793127_p41 hypothetical protein phrog_1295 unknown function unknown function -1 24057 24272
ALM64388.1 KP793127_p46 hypothetical protein phrog_1632 unknown function unknown function -1 26010 26300
ALM64377.1 KP793127_p35 hypothetical protein phrog_3530 unknown function unknown function -1 21374 21835
ALM64392.1 KP793127_p50 hypothetical protein phrog_2541 unknown function unknown function -1 28034 28261
ALM64399.1 KP793127_p57 middle expressed protein 5 phrog_6252 unknown function unknown function 1 31436 31567
ALM64372.1 KP793127_p30 hypothetical protein phrog_1415 unknown function unknown function -1 20016 20363
ALM64378.1 KP793127_p36 hypothetical protein phrog_1225 unknown function unknown function -1 21807 22112
ALM64373.1 KP793127_p31 hypothetical protein phrog_1441 unknown function unknown function -1 20363 20530
ALM64354.1 KP793127_p12 strucural protein 3 phrog_1484 virion structural protein head and packaging 1 7937 8275
ALM64356.1 KP793127_p15 major tail protein phrog_1433 major tail protein tail 1 8644 9549
ALM64355.1 KP793127_p13 strucural protein 4 phrog_1440 virion structural protein head and packaging 1 8266 8631
ALM64366.1 KP793127_p24 lysin phrog_670 endolysin lysis 1 18045 18767
ALM64350.1 KP793127_p8 major capsid protein phrog_1393 minor head protein head and packaging 1 5674 6855
ALM64396.1 KP793127_p54 middle expressed protein 2 phrog_1436 unknown function unknown function 1 29877 30008
ALM64347.1 KP793127_p5 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 3731 4015
ALM64349.1 KP793127_p7 protease phrog_80 head maturation protease head and packaging 1 5145 5681
ALM64361.1 KP793127_p19 distal tail protein phrog_1424 tail protein tail 1 14000 15475
ALM64391.1 KP793127_p49 hypothetical protein phrog_1284 unknown function unknown function -1 26990 28009
ALM64359.1 KP793127_p17 strucural protein 6 phrog_1421 virion structural protein head and packaging 1 10489 11001
ALM64360.1 KP793127_p18 tape measure protein phrog_58 tail length tape measure protein tail 1 11001 14000
ALM64370.1 KP793127_p28 hypothetical protein phrog_1430 unknown function unknown function -1 19574 19843
ALM64358.1 KP793127_p16 strucural protein 5 phrog_1420 virion structural protein head and packaging 1 10194 10469
ALM64345.1 KP793127_p3 DNA N-6-adenine-methyltransferase phrog_111 DNA methyltransferase other 1 1685 2107
ALM64397.1 KP793127_p55 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 30005 30487
ALM64367.1 KP793127_p25 hypothetical protein phrog_3775 transglycosylase other -1 18813 18977
ALM64363.1 KP793127_p21 strucural protein 7 phrog_1434 unknown function unknown function 1 16592 16885
ALM64364.1 KP793127_p22 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16875 17681
ALM64398.1 KP793127_p56 middle expressed protein 4 phrog_1652 unknown function unknown function 1 30645 30812
ALM64375.1 KP793127_p33 hypothetical protein phrog_2530 unknown function unknown function -1 20708 20899
ALM64369.1 KP793127_p27 hypothetical protein phrog_5152 unknown function unknown function -1 19305 19553
ALM64374.1 KP793127_p32 hypothetical protein phrog_1820 unknown function unknown function -1 20530 20715
ALM64381.1 KP793127_p39 hypothetical protein phrog_1825 DNA methyltransferase other -1 23224 23472
ALM64351.1 KP793127_p9 strucural protein 1 phrog_1428 head-tail connector protein connector 1 6876 7139
ALM64379.1 KP793127_p37 hypothetical protein phrog_1508 unknown function unknown function -1 22113 22232
ALM64365.1 KP793127_p23 holin phrog_1379 unknown function unknown function 1 17695 18048
ALM64390.1 KP793127_p48 hypothetical protein phrog_1405 unknown function unknown function -1 26740 26997