| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793128 |
Definition |
Lactococcus phage 936 group phage PhiM.16, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
31869 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
34.95 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM64424.1 | KP793128_p25 | hypothetical protein | phrog_5152 | unknown function | unknown function | -1 | 20141 | 20389 |
| ALM64420.1 | KP793128_p21 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 17717 | 18523 |
| ALM64405.1 | KP793128_p6 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3938 | 5074 |
| ALM64402.1 | KP793128_p3 | DNA methylase | phrog_111 | DNA methyltransferase | other | 1 | 1595 | 2017 |
| ALM64452.1 | KP793128_p53 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 30330 | 30809 |
| ALM64438.1 | KP793128_p39 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 24537 | 25046 |
| ALM64415.1 | KP793128_p16 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 11331 | 11843 |
| ALM64450.1 | KP793128_p51 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 30069 | 30197 |
| ALM64432.1 | KP793128_p33 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 21925 | 22182 |
| ALM64422.1 | KP793128_p23 | lysin | phrog_670 | endolysin | lysis | 1 | 18887 | 19603 |
| ALM64429.1 | KP793128_p30 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 21347 | 21514 |
| ALM64427.1 | KP793128_p28 | hypothetical protein | phrog_8962 | unknown function | unknown function | -1 | 20827 | 20925 |
| ALM64407.1 | KP793128_p8 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 5584 | 6765 |
| ALM64440.1 | KP793128_p41 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25271 | 25630 |
| ALM64435.1 | KP793128_p36 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 23096 | 23215 |
| ALM64433.1 | KP793128_p34 | hypothetical protein | phrog_3530 | unknown function | unknown function | -1 | 22358 | 22789 |
| ALM64431.1 | KP793128_p32 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 21692 | 21883 |
| ALM64408.1 | KP793128_p9 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 6786 | 7049 |
| ALM64411.1 | KP793128_p12 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 7682 | 8047 |
| ALM64437.1 | KP793128_p38 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 24207 | 24458 |
| ALM64412.1 | KP793128_p13 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 8104 | 10068 |
| ALM64418.1 | KP793128_p19 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 16317 | 17444 |
| ALM64403.1 | KP793128_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2029 | 3651 |
| ALM64414.1 | KP793128_p15 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 11036 | 11311 |
| ALM64421.1 | KP793128_p22 | holin | phrog_1379 | unknown function | unknown function | 1 | 18537 | 18890 |
| ALM64453.1 | KP793128_p54 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 30971 | 31138 |
| ALM64410.1 | KP793128_p11 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 7353 | 7691 |
| ALM64423.1 | KP793128_p24 | hypothetical protein | phrog_5087 | unknown function | unknown function | -1 | 19855 | 20112 |
| ALM64401.1 | KP793128_p2 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 771 | 1583 |
| ALM64436.1 | KP793128_p37 | DNA methylase | phrog_56 | DNA methyltransferase | other | -1 | 23273 | 24214 |
| ALM64416.1 | KP793128_p17 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11843 | 14842 |
| ALM64413.1 | KP793128_p14 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 10092 | 10997 |
| ALM64419.1 | KP793128_p20 | strucural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 17434 | 17727 |
| ALM64449.1 | KP793128_p50 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 29750 | 29938 |
| ALM64417.1 | KP793128_p18 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 14842 | 16317 |
| ALM64428.1 | KP793128_p29 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 21000 | 21347 |
| ALM64400.1 | KP793128_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 250 | 774 |
| ALM64425.1 | KP793128_p26 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 20410 | 20676 |
| ALM64443.1 | KP793128_p44 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 26500 | 26790 |
| ALM64434.1 | KP793128_p35 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 22791 | 23096 |
| ALM64441.1 | KP793128_p42 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 25632 | 26186 |
| ALM64451.1 | KP793128_p52 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 30202 | 30333 |
| ALM64409.1 | KP793128_p10 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 7049 | 7363 |
| ALM64404.1 | KP793128_p5 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 3641 | 3925 |
| ALM64439.1 | KP793128_p40 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 25043 | 25258 |
| ALM64448.1 | KP793128_p49 | hypothetical protein | phrog_7549 | unknown function | unknown function | -1 | 28798 | 29022 |
| ALM64430.1 | KP793128_p31 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 21514 | 21699 |
| ALM64426.1 | KP793128_p27 | hypothetical protein | phrog_10611 | unknown function | unknown function | -1 | 20677 | 20826 |
| ALM64444.1 | KP793128_p45 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 26787 | 27173 |
| ALM64446.1 | KP793128_p47 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 27480 | 28430 |
| ALM64445.1 | KP793128_p46 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 27230 | 27487 |
| ALM64406.1 | KP793128_p7 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 5055 | 5591 |
| ALM64447.1 | KP793128_p48 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 28524 | 28751 |
| ALM64442.1 | KP793128_p43 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 26280 | 26546 |