| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793132 |
Definition |
Lactococcus phage 936 group phage PhiM1127, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
32682 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
59 |
%GC |
34.78 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM64648.1 | KP793132_p22 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 17057 | 17863 |
| ALM64654.1 | KP793132_p28 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 19757 | 20026 |
| ALM64633.1 | KP793132_p7 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4701 | 5837 |
| ALM64641.1 | KP793132_p14 | major tail protein extension | phrog_3791 | major tail protein | tail | 1 | 8823 | 10353 |
| ALM64677.1 | KP793132_p51 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 28002 | 28952 |
| ALM64666.1 | KP793132_p40 | DNA methylase | phrog_2882 | DNA methyltransferase | other | -1 | 23723 | 24439 |
| ALM64640.1 | KP793132_p15 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8823 | 9728 |
| ALM64674.1 | KP793132_p48 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 27022 | 27312 |
| ALM64676.1 | KP793132_p50 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 27752 | 28009 |
| ALM64672.1 | KP793132_p46 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 26154 | 26708 |
| ALM64629.1 | KP793132_p3 | HNH endonuclease | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 1713 | 2237 |
| ALM64644.1 | KP793132_p18 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11180 | 14179 |
| ALM64670.1 | KP793132_p44 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 25566 | 25781 |
| ALM64647.1 | KP793132_p21 | strucural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 16774 | 17067 |
| ALM64669.1 | KP793132_p43 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 25060 | 25569 |
| ALM64657.1 | KP793132_p31 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 20546 | 20713 |
| ALM64650.1 | KP793132_p24 | lysin | phrog_670 | endolysin | lysis | 1 | 18227 | 18949 |
| ALM64679.1 | KP793132_p53 | hypothetical protein | phrog_4505 | unknown function | unknown function | -1 | 29273 | 29473 |
| ALM64634.1 | KP793132_p8 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 5818 | 6354 |
| ALM64639.1 | KP793132_p13 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 8445 | 8810 |
| ALM64638.1 | KP793132_p12 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 8116 | 8454 |
| ALM64673.1 | KP793132_p47 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 26802 | 27173 |
| ALM64652.1 | KP793132_p26 | hypothetical protein | phrog_5087 | unknown function | unknown function | -1 | 19201 | 19458 |
| ALM64665.1 | KP793132_p39 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 23478 | 23726 |
| ALM64643.1 | KP793132_p17 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 10668 | 11180 |
| ALM64627.1 | KP793132_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 250 | 774 |
| ALM64646.1 | KP793132_p20 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 15657 | 16784 |
| ALM64685.1 | KP793132_p59 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 31791 | 31958 |
| ALM64664.1 | KP793132_p38 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 22472 | 23485 |
| ALM64628.1 | KP793132_p2 | cytosine MTase | phrog_67 | DNA methyltransferase | other | 1 | 771 | 1619 |
| ALM64635.1 | KP793132_p9 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 6347 | 7528 |
| ALM64661.1 | KP793132_p35 | hypothetical protein | phrog_3530 | unknown function | unknown function | -1 | 21557 | 21988 |
| ALM64631.1 | KP793132_p5 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2792 | 4414 |
| ALM64642.1 | KP793132_p16 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 10373 | 10648 |
| ALM64645.1 | KP793132_p19 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 14179 | 15657 |
| ALM64630.1 | KP793132_p4 | DNA methylase | phrog_111 | DNA methyltransferase | other | 1 | 2373 | 2780 |
| ALM64658.1 | KP793132_p32 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 20713 | 20898 |
| ALM64649.1 | KP793132_p23 | holin | phrog_1379 | unknown function | unknown function | 1 | 17877 | 18230 |
| ALM64651.1 | KP793132_p25 | hypothetical protein | phrog_16598 | unknown function | unknown function | -1 | 18995 | 19111 |
| ALM64667.1 | KP793132_p41 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 24474 | 24788 |
| ALM64671.1 | KP793132_p45 | hypothetical protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25794 | 26150 |
| ALM64659.1 | KP793132_p33 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 20891 | 21082 |
| ALM64668.1 | KP793132_p42 | hypothetical protein | phrog_11716 | unknown function | unknown function | -1 | 24788 | 24976 |
| ALM64660.1 | KP793132_p34 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 21124 | 21381 |
| ALM64682.1 | KP793132_p56 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 30889 | 31017 |
| ALM64653.1 | KP793132_p27 | hypothetical protein | phrog_5152 | unknown function | unknown function | -1 | 19488 | 19736 |
| ALM64663.1 | KP793132_p37 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 22295 | 22414 |
| ALM64675.1 | KP793132_p49 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 27309 | 27695 |
| ALM64637.1 | KP793132_p11 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 7812 | 8126 |
| ALM64662.1 | KP793132_p36 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 21990 | 22295 |
| ALM64683.1 | KP793132_p57 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 31022 | 31153 |
| ALM64656.1 | KP793132_p30 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 20199 | 20546 |
| ALM64632.1 | KP793132_p6 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 4404 | 4688 |
| ALM64655.1 | KP793132_p29 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 20023 | 20196 |
| ALM64681.1 | KP793132_p55 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 30570 | 30758 |
| ALM64684.1 | KP793132_p58 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 31150 | 31629 |
| ALM64678.1 | KP793132_p52 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 29045 | 29272 |
| ALM64680.1 | KP793132_p54 | hypothetical protein | phrog_7915 | unknown function | unknown function | -1 | 29515 | 30207 |
| ALM64636.1 | KP793132_p10 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 7549 | 7812 |