Genomic map of Lactococcus phage 936 group phage PhiLj (KP793133)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793133
Definition
Lactococcus phage 936 group phage PhiLj, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
28983
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
35.13
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM64716.1 KP793133_p31 hypothetical protein phrog_56 DNA methyltransferase other -1 20273 21169
ALM64693.1 KP793133_p8 strucural protein 2 phrog_1429 virion structural protein head and packaging 1 5816 6130
ALM64701.1 KP793133_p16 distal tail protein phrog_1424 tail protein tail 1 13365 14261
ALM64711.1 KP793133_p26 hypothetical protein phrog_2530 unknown function unknown function -1 18785 18976
ALM64718.1 KP793133_p33 hypothetical protein phrog_1919 unknown function unknown function -1 21451 21753
ALM64706.1 KP793133_p21 lysin phrog_670 endolysin lysis 1 16839 17537
ALM64697.1 KP793133_p12 major tail protein phrog_1433 major tail protein tail 1 8863 9768
ALM64722.1 KP793133_p37 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 22939 23505
ALM64726.1 KP793133_p41 DNA polymerase phrog_1284 unknown function unknown function -1 24459 25409
ALM64700.1 KP793133_p15 tape measure protein phrog_58 tail length tape measure protein tail 1 10615 13365
ALM64728.1 KP793133_p43 hypothetical protein phrog_4505 unknown function unknown function -1 25877 26077
ALM64703.1 KP793133_p18 strucural protein 9 phrog_1434 unknown function unknown function 1 15378 15665
ALM64691.1 KP793133_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4351 5532
ALM64731.1 KP793133_p46 middle expressed protein 1 phrog_1952 unknown function unknown function 1 27601 27729
ALM64734.1 KP793133_p49 middle expressed protein 4 phrog_1652 unknown function unknown function 1 28344 28511
ALM64717.1 KP793133_p32 hypothetical protein phrog_1825 DNA methyltransferase other -1 21162 21413
ALM64714.1 KP793133_p29 hypothetical protein phrog_1508 unknown function unknown function -1 19843 19962
ALM64690.1 KP793133_p5 protease phrog_80 head maturation protease head and packaging 1 3822 4358
ALM64712.1 KP793133_p27 hypothetical protein phrog_1509 unknown function unknown function -1 19018 19269
ALM64708.1 KP793133_p23 hypothetical protein phrog_3389 unknown function unknown function -1 17905 18078
ALM64688.1 KP793133_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2408 2692
ALM64733.1 KP793133_p48 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27862 28344
ALM64692.1 KP793133_p7 strucural protein 1 phrog_1428 head-tail connector protein connector 1 5553 5816
ALM64709.1 KP793133_p24 hypothetical protein phrog_1415 unknown function unknown function -1 18081 18428
ALM64695.1 KP793133_p10 strucural protein 4 phrog_1440 virion structural protein head and packaging 1 6459 6824
ALM64719.1 KP793133_p34 hypothetical protein phrog_1317 unknown function unknown function -1 21838 22350
ALM64689.1 KP793133_p4 portal protein phrog_12 portal protein head and packaging 1 2705 3841
ALM64686.1 KP793133_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 271 795
ALM64699.1 KP793133_p14 strucural protein 6 phrog_1421 virion structural protein head and packaging 1 10103 10615
ALM64725.1 KP793133_p40 hypothetical protein phrog_3604 unknown function unknown function -1 24284 24466
ALM64704.1 KP793133_p19 receptor binding protein phrog_1630 receptor binding tail protein tail 1 15662 16468
ALM64707.1 KP793133_p22 hypothetical protein phrog_1430 unknown function unknown function -1 17639 17908
ALM64727.1 KP793133_p42 hypothetical protein phrog_18661 unknown function unknown function -1 25453 25866
ALM64724.1 KP793133_p39 hypothetical protein phrog_1405 unknown function unknown function -1 24049 24312
ALM64732.1 KP793133_p47 middle expressed protein 2 phrog_1436 unknown function unknown function 1 27734 27865
ALM64723.1 KP793133_p38 hypothetical protein phrog_1449 unknown function unknown function -1 23492 23899
ALM64702.1 KP793133_p17 tail associated lysin phrog_1432 tail associated lysin tail 1 14261 15388
ALM64720.1 KP793133_p35 hypothetical protein phrog_1295 unknown function unknown function -1 22347 22562
ALM64696.1 KP793133_p11 neck passage structure phrog_2370 neck passage structure connector 1 6881 8839
ALM64730.1 KP793133_p45 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26973 27464
ALM64687.1 KP793133_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 796 2418
ALM64698.1 KP793133_p13 strucural protein 5 phrog_1420 virion structural protein head and packaging 1 9808 10083
ALM64705.1 KP793133_p20 holin phrog_1379 unknown function unknown function 1 16489 16842
ALM64710.1 KP793133_p25 hypothetical protein phrog_1441 unknown function unknown function -1 18428 18661
ALM64713.1 KP793133_p28 hypothetical protein phrog_1225 unknown function unknown function -1 19352 19843
ALM64729.1 KP793133_p44 hypothetical protein phrog_5487 unknown function unknown function -1 26112 26282
ALM64715.1 KP793133_p30 hypothetical protein phrog_19708 unknown function unknown function -1 19959 20153
ALM64721.1 KP793133_p36 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22575 22934
ALM64694.1 KP793133_p9 strucural protein 3 phrog_1484 virion structural protein head and packaging 1 6127 6468