| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793133 |
Definition |
Lactococcus phage 936 group phage PhiLj, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
28983 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
35.13 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM64716.1 | KP793133_p31 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 20273 | 21169 |
| ALM64693.1 | KP793133_p8 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 5816 | 6130 |
| ALM64701.1 | KP793133_p16 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13365 | 14261 |
| ALM64711.1 | KP793133_p26 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 18785 | 18976 |
| ALM64718.1 | KP793133_p33 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 21451 | 21753 |
| ALM64706.1 | KP793133_p21 | lysin | phrog_670 | endolysin | lysis | 1 | 16839 | 17537 |
| ALM64697.1 | KP793133_p12 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8863 | 9768 |
| ALM64722.1 | KP793133_p37 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 22939 | 23505 |
| ALM64726.1 | KP793133_p41 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 24459 | 25409 |
| ALM64700.1 | KP793133_p15 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10615 | 13365 |
| ALM64728.1 | KP793133_p43 | hypothetical protein | phrog_4505 | unknown function | unknown function | -1 | 25877 | 26077 |
| ALM64703.1 | KP793133_p18 | strucural protein 9 | phrog_1434 | unknown function | unknown function | 1 | 15378 | 15665 |
| ALM64691.1 | KP793133_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4351 | 5532 |
| ALM64731.1 | KP793133_p46 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 27601 | 27729 |
| ALM64734.1 | KP793133_p49 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 28344 | 28511 |
| ALM64717.1 | KP793133_p32 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21162 | 21413 |
| ALM64714.1 | KP793133_p29 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 19843 | 19962 |
| ALM64690.1 | KP793133_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3822 | 4358 |
| ALM64712.1 | KP793133_p27 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19018 | 19269 |
| ALM64708.1 | KP793133_p23 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 17905 | 18078 |
| ALM64688.1 | KP793133_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2408 | 2692 |
| ALM64733.1 | KP793133_p48 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27862 | 28344 |
| ALM64692.1 | KP793133_p7 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5553 | 5816 |
| ALM64709.1 | KP793133_p24 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18081 | 18428 |
| ALM64695.1 | KP793133_p10 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6459 | 6824 |
| ALM64719.1 | KP793133_p34 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 21838 | 22350 |
| ALM64689.1 | KP793133_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2705 | 3841 |
| ALM64686.1 | KP793133_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 271 | 795 |
| ALM64699.1 | KP793133_p14 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 10103 | 10615 |
| ALM64725.1 | KP793133_p40 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 24284 | 24466 |
| ALM64704.1 | KP793133_p19 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15662 | 16468 |
| ALM64707.1 | KP793133_p22 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17639 | 17908 |
| ALM64727.1 | KP793133_p42 | hypothetical protein | phrog_18661 | unknown function | unknown function | -1 | 25453 | 25866 |
| ALM64724.1 | KP793133_p39 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 24049 | 24312 |
| ALM64732.1 | KP793133_p47 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 27734 | 27865 |
| ALM64723.1 | KP793133_p38 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 23492 | 23899 |
| ALM64702.1 | KP793133_p17 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14261 | 15388 |
| ALM64720.1 | KP793133_p35 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 22347 | 22562 |
| ALM64696.1 | KP793133_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6881 | 8839 |
| ALM64730.1 | KP793133_p45 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26973 | 27464 |
| ALM64687.1 | KP793133_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 796 | 2418 |
| ALM64698.1 | KP793133_p13 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 9808 | 10083 |
| ALM64705.1 | KP793133_p20 | holin | phrog_1379 | unknown function | unknown function | 1 | 16489 | 16842 |
| ALM64710.1 | KP793133_p25 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18428 | 18661 |
| ALM64713.1 | KP793133_p28 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19352 | 19843 |
| ALM64729.1 | KP793133_p44 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 26112 | 26282 |
| ALM64715.1 | KP793133_p30 | hypothetical protein | phrog_19708 | unknown function | unknown function | -1 | 19959 | 20153 |
| ALM64721.1 | KP793133_p36 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 22575 | 22934 |
| ALM64694.1 | KP793133_p9 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6127 | 6468 |