Genomic map of Lactococcus phage 936 group phage PhiS0139 (KP793134)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793134
Definition
Lactococcus phage 936 group phage PhiS0139, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
30116
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
35.19
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM64784.1 KP793134_p50 middle expressed protein 1 phrog_1952 unknown function unknown function 1 28583 28711
ALM64755.1 KP793134_p21 lysin phrog_670 endolysin lysis 1 16707 17447
ALM64747.1 KP793134_p13 strucural protein 5 phrog_1420 virion structural protein head and packaging 1 9688 9963
ALM64760.1 KP793134_p26 hypothetical protein phrog_1820 unknown function unknown function -1 18500 18676
ALM64745.1 KP793134_p11 neck passage structure phrog_2370 neck passage structure connector 1 7020 8975
ALM64769.1 KP793134_p35 hypothetical protein phrog_1825 DNA methyltransferase other -1 22274 22519
ALM64786.1 KP793134_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28844 29326
ALM64780.1 KP793134_p46 hypothetical protein phrog_2541 unknown function unknown function -1 26771 26992
ALM64763.1 KP793134_p29 hypothetical protein phrog_6037 unknown function unknown function -1 19242 19439
ALM64768.1 KP793134_p34 methylase phrog_56 DNA methyltransferase other -1 21382 22281
ALM64744.1 KP793134_p10 strucural protein 4 phrog_1440 virion structural protein head and packaging 1 6598 6963
ALM64766.1 KP793134_p32 hypothetical protein phrog_1083 unknown function unknown function -1 19957 20313
ALM64774.1 KP793134_p40 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24374 24874
ALM64751.1 KP793134_p17 tail associated lysin phrog_1432 tail associated lysin tail 1 14141 15268
ALM64740.1 KP793134_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4490 5671
ALM64742.1 KP793134_p8 strucural protein 2 phrog_1429 virion structural protein head and packaging 1 5955 6269
ALM64761.1 KP793134_p27 hypothetical protein phrog_2530 unknown function unknown function -1 18678 18869
ALM64782.1 KP793134_p48 hypothetical protein phrog_2413 unknown function unknown function -1 27735 27854
ALM64764.1 KP793134_p30 hypothetical protein phrog_1225 unknown function unknown function -1 19518 19826
ALM64776.1 KP793134_p42 hypothetical protein phrog_1632 unknown function unknown function -1 25081 25371
ALM64749.1 KP793134_p15 tape measure protein phrog_58 tail length tape measure protein tail 1 10495 13245
ALM64736.1 KP793134_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 935 2557
ALM64783.1 KP793134_p49 hypothetical protein phrog_1656 unknown function unknown function -1 28264 28452
ALM64750.1 KP793134_p16 distal tail protein phrog_1424 tail protein tail 1 13245 14141
ALM64785.1 KP793134_p51 middle expressed protein 2 phrog_1436 unknown function unknown function 1 28716 28847
ALM64737.1 KP793134_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2547 2831
ALM64767.1 KP793134_p33 hypothetical protein phrog_36652 unknown function unknown function -1 20336 20881
ALM64778.1 KP793134_p44 hypothetical protein phrog_3604 unknown function unknown function -1 25653 25835
ALM64759.1 KP793134_p25 hypothetical protein phrog_1441 unknown function unknown function -1 18333 18500
ALM64762.1 KP793134_p28 hypothetical protein phrog_1509 unknown function unknown function -1 18911 19168
ALM64757.1 KP793134_p23 hypothetical protein phrog_8962 unknown function unknown function -1 17810 17911
ALM64748.1 KP793134_p14 strucural protein 6 phrog_1421 virion structural protein head and packaging 1 9983 10495
ALM64735.1 KP793134_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
ALM64787.1 KP793134_p53 middle expressed protein 4 phrog_1652 unknown function unknown function 1 29326 29493
ALM64775.1 KP793134_p41 hypothetical protein phrog_1449 unknown function unknown function -1 24861 25127
ALM64753.1 KP793134_p19 receptor binding protein phrog_1630 receptor binding tail protein tail 1 15541 16335
ALM64771.1 KP793134_p37 hypothetical protein phrog_1295 unknown function unknown function -1 23219 23434
ALM64738.1 KP793134_p4 protease phrog_12 portal protein head and packaging 1 2844 3980
ALM64746.1 KP793134_p12 major tail protein phrog_1433 major tail protein tail 1 8998 9660
ALM64758.1 KP793134_p24 hypothetical protein phrog_1415 unknown function unknown function -1 17986 18333
ALM64770.1 KP793134_p36 hypothetical protein phrog_1317 unknown function unknown function -1 22713 23222
ALM64781.1 KP793134_p47 hypothetical protein phrog_4505 unknown function unknown function -1 27050 27235
ALM64779.1 KP793134_p45 hypothetical protein phrog_1284 unknown function unknown function -1 25828 26778
ALM64773.1 KP793134_p39 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23811 24377
ALM64741.1 KP793134_p7 strucural protein 1 phrog_1428 head-tail connector protein connector 1 5692 5955
ALM64765.1 KP793134_p31 hypothetical protein phrog_1508 unknown function unknown function -1 19827 19946
ALM64739.1 KP793134_p5 portal protein phrog_80 head maturation protease head and packaging 1 3961 4497
ALM64772.1 KP793134_p38 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23447 23806
ALM64743.1 KP793134_p9 strucural protein 3 phrog_1484 virion structural protein head and packaging 1 6266 6607
ALM64777.1 KP793134_p43 hypothetical protein phrog_1405 unknown function unknown function -1 25424 25681
ALM64754.1 KP793134_p20 holin phrog_1379 unknown function unknown function 1 16357 16710
ALM64752.1 KP793134_p18 strucural protein 7 phrog_1434 unknown function unknown function 1 15258 15551
ALM64756.1 KP793134_p22 hypothetical protein phrog_1430 unknown function unknown function -1 17553 17813