| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793134 |
Definition |
Lactococcus phage 936 group phage PhiS0139, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
30116 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
35.19 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM64784.1 | KP793134_p50 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 28583 | 28711 |
| ALM64755.1 | KP793134_p21 | lysin | phrog_670 | endolysin | lysis | 1 | 16707 | 17447 |
| ALM64747.1 | KP793134_p13 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 9688 | 9963 |
| ALM64760.1 | KP793134_p26 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 18500 | 18676 |
| ALM64745.1 | KP793134_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 7020 | 8975 |
| ALM64769.1 | KP793134_p35 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 22274 | 22519 |
| ALM64786.1 | KP793134_p52 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28844 | 29326 |
| ALM64780.1 | KP793134_p46 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 26771 | 26992 |
| ALM64763.1 | KP793134_p29 | hypothetical protein | phrog_6037 | unknown function | unknown function | -1 | 19242 | 19439 |
| ALM64768.1 | KP793134_p34 | methylase | phrog_56 | DNA methyltransferase | other | -1 | 21382 | 22281 |
| ALM64744.1 | KP793134_p10 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 6598 | 6963 |
| ALM64766.1 | KP793134_p32 | hypothetical protein | phrog_1083 | unknown function | unknown function | -1 | 19957 | 20313 |
| ALM64774.1 | KP793134_p40 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24374 | 24874 |
| ALM64751.1 | KP793134_p17 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14141 | 15268 |
| ALM64740.1 | KP793134_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4490 | 5671 |
| ALM64742.1 | KP793134_p8 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 5955 | 6269 |
| ALM64761.1 | KP793134_p27 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 18678 | 18869 |
| ALM64782.1 | KP793134_p48 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 27735 | 27854 |
| ALM64764.1 | KP793134_p30 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19518 | 19826 |
| ALM64776.1 | KP793134_p42 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25081 | 25371 |
| ALM64749.1 | KP793134_p15 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10495 | 13245 |
| ALM64736.1 | KP793134_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 935 | 2557 |
| ALM64783.1 | KP793134_p49 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 28264 | 28452 |
| ALM64750.1 | KP793134_p16 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13245 | 14141 |
| ALM64785.1 | KP793134_p51 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 28716 | 28847 |
| ALM64737.1 | KP793134_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2547 | 2831 |
| ALM64767.1 | KP793134_p33 | hypothetical protein | phrog_36652 | unknown function | unknown function | -1 | 20336 | 20881 |
| ALM64778.1 | KP793134_p44 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 25653 | 25835 |
| ALM64759.1 | KP793134_p25 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 18333 | 18500 |
| ALM64762.1 | KP793134_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 18911 | 19168 |
| ALM64757.1 | KP793134_p23 | hypothetical protein | phrog_8962 | unknown function | unknown function | -1 | 17810 | 17911 |
| ALM64748.1 | KP793134_p14 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 9983 | 10495 |
| ALM64735.1 | KP793134_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 252 | 776 |
| ALM64787.1 | KP793134_p53 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 29326 | 29493 |
| ALM64775.1 | KP793134_p41 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 24861 | 25127 |
| ALM64753.1 | KP793134_p19 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15541 | 16335 |
| ALM64771.1 | KP793134_p37 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 23219 | 23434 |
| ALM64738.1 | KP793134_p4 | protease | phrog_12 | portal protein | head and packaging | 1 | 2844 | 3980 |
| ALM64746.1 | KP793134_p12 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8998 | 9660 |
| ALM64758.1 | KP793134_p24 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 17986 | 18333 |
| ALM64770.1 | KP793134_p36 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 22713 | 23222 |
| ALM64781.1 | KP793134_p47 | hypothetical protein | phrog_4505 | unknown function | unknown function | -1 | 27050 | 27235 |
| ALM64779.1 | KP793134_p45 | hypothetical protein | phrog_1284 | unknown function | unknown function | -1 | 25828 | 26778 |
| ALM64773.1 | KP793134_p39 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 23811 | 24377 |
| ALM64741.1 | KP793134_p7 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 5692 | 5955 |
| ALM64765.1 | KP793134_p31 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 19827 | 19946 |
| ALM64739.1 | KP793134_p5 | portal protein | phrog_80 | head maturation protease | head and packaging | 1 | 3961 | 4497 |
| ALM64772.1 | KP793134_p38 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23447 | 23806 |
| ALM64743.1 | KP793134_p9 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 6266 | 6607 |
| ALM64777.1 | KP793134_p43 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25424 | 25681 |
| ALM64754.1 | KP793134_p20 | holin | phrog_1379 | unknown function | unknown function | 1 | 16357 | 16710 |
| ALM64752.1 | KP793134_p18 | strucural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 15258 | 15551 |
| ALM64756.1 | KP793134_p22 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 17553 | 17813 |