| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KP793135 |
Definition |
Lactococcus phage 936 group phage Phi.16, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
PVOG |
Length |
31561 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
57 |
%GC |
34.83 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALM64828.1 | KP793135_p41 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 23956 | 24171 |
| ALM64819.1 | KP793135_p32 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 20430 | 20615 |
| ALM64815.1 | KP793135_p28 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 19474 | 19743 |
| ALM64813.1 | KP793135_p26 | hypothetical protein | phrog_5087 | unknown function | unknown function | -1 | 18919 | 19176 |
| ALM64838.1 | KP793135_p51 | hypothetical protein | phrog_5487 | unknown function | unknown function | -1 | 28205 | 28369 |
| ALM64844.1 | KP793135_p57 | middle expressed protein 5 | phrog_6252 | unknown function | unknown function | 1 | 31366 | 31497 |
| ALM64792.1 | KP793135_p5 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 3631 | 3915 |
| ALM64809.1 | KP793135_p22 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16775 | 17581 |
| ALM64804.1 | KP793135_p17 | strucural protein 6 | phrog_1421 | virion structural protein | head and packaging | 1 | 10389 | 10901 |
| ALM64832.1 | KP793135_p45 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 25689 | 25862 |
| ALM64810.1 | KP793135_p23 | holin | phrog_1379 | unknown function | unknown function | 1 | 17595 | 17948 |
| ALM64811.1 | KP793135_p24 | lysin | phrog_670 | endolysin | lysis | 1 | 17945 | 18667 |
| ALM64806.1 | KP793135_p19 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 13900 | 15375 |
| ALM64789.1 | KP793135_p2 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 761 | 1573 |
| ALM64840.1 | KP793135_p53 | middle expressed protein 1 | phrog_1952 | unknown function | unknown function | 1 | 29674 | 29802 |
| ALM64805.1 | KP793135_p18 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10901 | 13900 |
| ALM64829.1 | KP793135_p42 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24184 | 24543 |
| ALM64796.1 | KP793135_p9 | strucural protein 1 | phrog_1428 | head-tail connector protein | connector | 1 | 6776 | 7039 |
| ALM64808.1 | KP793135_p21 | strucural protein 7 | phrog_1434 | unknown function | unknown function | 1 | 16492 | 16785 |
| ALM64831.1 | KP793135_p44 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 25098 | 25598 |
| ALM64807.1 | KP793135_p20 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 15375 | 16502 |
| ALM64836.1 | KP793135_p49 | DNA polymerase | phrog_1284 | unknown function | unknown function | -1 | 26892 | 27911 |
| ALM64812.1 | KP793135_p25 | hypothetical protein | phrog_3775 | transglycosylase | other | -1 | 18713 | 18877 |
| ALM64842.1 | KP793135_p55 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29935 | 30417 |
| ALM64820.1 | KP793135_p33 | hypothetical protein | phrog_2530 | unknown function | unknown function | -1 | 20608 | 20799 |
| ALM64825.1 | KP793135_p38 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 22189 | 23130 |
| ALM64816.1 | KP793135_p29 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 19740 | 19913 |
| ALM64817.1 | KP793135_p30 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 19916 | 20263 |
| ALM64798.1 | KP793135_p11 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 7350 | 7847 |
| ALM64837.1 | KP793135_p50 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 27936 | 28163 |
| ALM64833.1 | KP793135_p46 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25909 | 26199 |
| ALM64843.1 | KP793135_p56 | middle expressed protein 4 | phrog_1652 | unknown function | unknown function | 1 | 30575 | 30742 |
| ALM64830.1 | KP793135_p43 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24547 | 25113 |
| ALM64795.1 | KP793135_p8 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 5574 | 6755 |
| ALM64800.1 | KP793135_p13 | strucural protein 4 | phrog_1440 | virion structural protein | head and packaging | 1 | 8166 | 8531 |
| ALM64839.1 | KP793135_p52 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 29355 | 29543 |
| ALM64827.1 | KP793135_p40 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 23450 | 23959 |
| ALM64801.1 | KP793135_p15 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8544 | 9449 |
| ALM64797.1 | KP793135_p10 | strucural protein 2 | phrog_1429 | virion structural protein | head and packaging | 1 | 7039 | 7353 |
| ALM64841.1 | KP793135_p54 | middle expressed protein 2 | phrog_1436 | unknown function | unknown function | 1 | 29807 | 29938 |
| ALM64802.1 | KP793135_p14 | major tail protein extension | phrog_3791 | major tail protein | tail | 1 | 8544 | 10074 |
| ALM64799.1 | KP793135_p12 | strucural protein 3 | phrog_1484 | virion structural protein | head and packaging | 1 | 7837 | 8175 |
| ALM64818.1 | KP793135_p31 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 20263 | 20430 |
| ALM64824.1 | KP793135_p37 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 22012 | 22131 |
| ALM64803.1 | KP793135_p16 | strucural protein 5 | phrog_1420 | virion structural protein | head and packaging | 1 | 10094 | 10369 |
| ALM64788.1 | KP793135_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 240 | 764 |
| ALM64826.1 | KP793135_p39 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 23123 | 23371 |
| ALM64793.1 | KP793135_p6 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3946 | 5064 |
| ALM64791.1 | KP793135_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2019 | 3641 |
| ALM64822.1 | KP793135_p35 | hypothetical protein | phrog_3530 | unknown function | unknown function | -1 | 21274 | 21735 |
| ALM64790.1 | KP793135_p3 | methylase | phrog_111 | DNA methyltransferase | other | 1 | 1585 | 2007 |
| ALM64821.1 | KP793135_p34 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 20841 | 21098 |
| ALM64814.1 | KP793135_p27 | hypothetical protein | phrog_5152 | unknown function | unknown function | -1 | 19205 | 19453 |
| ALM64794.1 | KP793135_p7 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 5045 | 5581 |
| ALM64823.1 | KP793135_p36 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 21707 | 22012 |
| ALM64835.1 | KP793135_p48 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 26642 | 26899 |
| ALM64834.1 | KP793135_p47 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 26196 | 26585 |