Genomic map of Lactococcus phage 936 group phage Phi.16 (KP793135)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP793135
Definition
Lactococcus phage 936 group phage Phi.16, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
PVOG
Length
31561
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
34.83
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALM64828.1 KP793135_p41 hypothetical protein phrog_1295 unknown function unknown function -1 23956 24171
ALM64819.1 KP793135_p32 hypothetical protein phrog_1820 unknown function unknown function -1 20430 20615
ALM64815.1 KP793135_p28 hypothetical protein phrog_1430 unknown function unknown function -1 19474 19743
ALM64813.1 KP793135_p26 hypothetical protein phrog_5087 unknown function unknown function -1 18919 19176
ALM64838.1 KP793135_p51 hypothetical protein phrog_5487 unknown function unknown function -1 28205 28369
ALM64844.1 KP793135_p57 middle expressed protein 5 phrog_6252 unknown function unknown function 1 31366 31497
ALM64792.1 KP793135_p5 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 3631 3915
ALM64809.1 KP793135_p22 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16775 17581
ALM64804.1 KP793135_p17 strucural protein 6 phrog_1421 virion structural protein head and packaging 1 10389 10901
ALM64832.1 KP793135_p45 hypothetical protein phrog_1449 unknown function unknown function -1 25689 25862
ALM64810.1 KP793135_p23 holin phrog_1379 unknown function unknown function 1 17595 17948
ALM64811.1 KP793135_p24 lysin phrog_670 endolysin lysis 1 17945 18667
ALM64806.1 KP793135_p19 distal tail protein phrog_1424 tail protein tail 1 13900 15375
ALM64789.1 KP793135_p2 DNA methylase phrog_67 DNA methyltransferase other 1 761 1573
ALM64840.1 KP793135_p53 middle expressed protein 1 phrog_1952 unknown function unknown function 1 29674 29802
ALM64805.1 KP793135_p18 tape measure protein phrog_58 tail length tape measure protein tail 1 10901 13900
ALM64829.1 KP793135_p42 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24184 24543
ALM64796.1 KP793135_p9 strucural protein 1 phrog_1428 head-tail connector protein connector 1 6776 7039
ALM64808.1 KP793135_p21 strucural protein 7 phrog_1434 unknown function unknown function 1 16492 16785
ALM64831.1 KP793135_p44 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25098 25598
ALM64807.1 KP793135_p20 tail associated lysin phrog_1432 tail associated lysin tail 1 15375 16502
ALM64836.1 KP793135_p49 DNA polymerase phrog_1284 unknown function unknown function -1 26892 27911
ALM64812.1 KP793135_p25 hypothetical protein phrog_3775 transglycosylase other -1 18713 18877
ALM64842.1 KP793135_p55 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29935 30417
ALM64820.1 KP793135_p33 hypothetical protein phrog_2530 unknown function unknown function -1 20608 20799
ALM64825.1 KP793135_p38 hypothetical protein phrog_56 DNA methyltransferase other -1 22189 23130
ALM64816.1 KP793135_p29 hypothetical protein phrog_3389 unknown function unknown function -1 19740 19913
ALM64817.1 KP793135_p30 hypothetical protein phrog_1415 unknown function unknown function -1 19916 20263
ALM64798.1 KP793135_p11 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7350 7847
ALM64837.1 KP793135_p50 hypothetical protein phrog_2541 unknown function unknown function -1 27936 28163
ALM64833.1 KP793135_p46 hypothetical protein phrog_1632 unknown function unknown function -1 25909 26199
ALM64843.1 KP793135_p56 middle expressed protein 4 phrog_1652 unknown function unknown function 1 30575 30742
ALM64830.1 KP793135_p43 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24547 25113
ALM64795.1 KP793135_p8 major capsid protein phrog_1393 minor head protein head and packaging 1 5574 6755
ALM64800.1 KP793135_p13 strucural protein 4 phrog_1440 virion structural protein head and packaging 1 8166 8531
ALM64839.1 KP793135_p52 hypothetical protein phrog_1656 unknown function unknown function -1 29355 29543
ALM64827.1 KP793135_p40 hypothetical protein phrog_1317 unknown function unknown function -1 23450 23959
ALM64801.1 KP793135_p15 major tail protein phrog_1433 major tail protein tail 1 8544 9449
ALM64797.1 KP793135_p10 strucural protein 2 phrog_1429 virion structural protein head and packaging 1 7039 7353
ALM64841.1 KP793135_p54 middle expressed protein 2 phrog_1436 unknown function unknown function 1 29807 29938
ALM64802.1 KP793135_p14 major tail protein extension phrog_3791 major tail protein tail 1 8544 10074
ALM64799.1 KP793135_p12 strucural protein 3 phrog_1484 virion structural protein head and packaging 1 7837 8175
ALM64818.1 KP793135_p31 hypothetical protein phrog_1441 unknown function unknown function -1 20263 20430
ALM64824.1 KP793135_p37 hypothetical protein phrog_1508 unknown function unknown function -1 22012 22131
ALM64803.1 KP793135_p16 strucural protein 5 phrog_1420 virion structural protein head and packaging 1 10094 10369
ALM64788.1 KP793135_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 240 764
ALM64826.1 KP793135_p39 hypothetical protein phrog_1825 DNA methyltransferase other -1 23123 23371
ALM64793.1 KP793135_p6 portal protein phrog_12 portal protein head and packaging 1 3946 5064
ALM64791.1 KP793135_p4 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2019 3641
ALM64822.1 KP793135_p35 hypothetical protein phrog_3530 unknown function unknown function -1 21274 21735
ALM64790.1 KP793135_p3 methylase phrog_111 DNA methyltransferase other 1 1585 2007
ALM64821.1 KP793135_p34 hypothetical protein phrog_1509 unknown function unknown function -1 20841 21098
ALM64814.1 KP793135_p27 hypothetical protein phrog_5152 unknown function unknown function -1 19205 19453
ALM64794.1 KP793135_p7 protease phrog_80 head maturation protease head and packaging 1 5045 5581
ALM64823.1 KP793135_p36 hypothetical protein phrog_1225 unknown function unknown function -1 21707 22012
ALM64835.1 KP793135_p48 hypothetical protein phrog_1405 unknown function unknown function -1 26642 26899
ALM64834.1 KP793135_p47 hypothetical protein phrog_2228 unknown function unknown function -1 26196 26585