Genomic map of Staphylococcus phage Stau2 (KP881332)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP881332
Definition
Staphylococcus phage Stau2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Twortvirinae; Silviavirus; Staphylococcus virus Stau2.
DB of origin
PVOG
Length
133798
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
177
%GC
29.97
Number of singletons
0
Number of paralogs
7

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKA61356.1 KP881332_p105 structural protein phrog_1104 virion structural protein head and packaging 1 95208 95669
AKA61314.1 KP881332_p63 cytosine specific DNA methyltransferase phrog_67 DNA methyltransferase other 1 61199 61918
AKA61381.1 KP881332_p130 hypothetical protein phrog_18429 unknown function unknown function 1 107086 107424
AKA61357.1 KP881332_p106 transposase domain containing protein phrog_1303 DNA binding protein DNA, RNA and nucleotide metabolism 1 95725 96168
AKA61370.1 KP881332_p119 hypothetical protein phrog_13842 unknown function unknown function 1 101926 102207
AKA61360.1 KP881332_p109 hypothetical protein phrog_3157 unknown function unknown function 1 97389 97640
AKA61327.1 KP881332_p76 homing endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 72587 73069
AKA61415.1 KP881332_p164 hypothetical protein phrog_2642 unknown function unknown function -1 127167 127625
AKA61302.1 KP881332_p51 structural protein phrog_1394 virion structural protein head and packaging 1 47620 48159
AKA61371.1 KP881332_p120 pentapeptide repeat-containing protein phrog_923 unknown function unknown function 1 102176 102907
AKA61363.1 KP881332_p112 hypothetical protein phrog_3143 unknown function unknown function 1 98568 98882
AKA61366.1 KP881332_p115 pentapeptide repeat protein phrog_923 unknown function unknown function 1 99626 100438
AKA61393.1 KP881332_p142 hypothetical protein phrog_8830 unknown function unknown function 1 112873 113217
AKA61269.1 KP881332_p18 membrane protein phrog_3937 unknown function unknown function 1 10967 11326
AKA61359.1 KP881332_p108 membrane protein phrog_2863 unknown function unknown function 1 96850 97248
AKA61332.1 KP881332_p81 integration host factor phrog_379 DNA binding protein DNA, RNA and nucleotide metabolism 1 75510 75821
AKA61383.1 KP881332_p132 hypothetical protein phrog_13773 unknown function unknown function 1 107882 108160
AKA61374.1 KP881332_p123 homing endonuclease phrog_9084 homing endonuclease DNA, RNA and nucleotide metabolism 1 103895 104440
AKA61273.1 KP881332_p22 portal protein phrog_11117 portal protein head and packaging 1 14621 15325
AKA61328.1 KP881332_p77 ribonucleotide-diphosphate reductase subunit alpha phrog_3844 NrdA-like aerobic NDP reductase large subunit moron, auxiliary metabolic gene and host takeover 1 73123 74049
AKA61292.1 KP881332_p41 tail lysin phrog_10341 endolysin lysis 1 33990 34859
AKA61266.1 KP881332_p15 hypothetical protein phrog_1917 virion structural protein head and packaging 1 8664 9464
AKA61355.1 KP881332_p104 hypothetical protein phrog_1007 unknown function unknown function 1 94459 95190
AKA61324.1 KP881332_p73 resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 68583 69191
AKA61257.1 KP881332_p6 membrane protein phrog_3395 membrane protein moron, auxiliary metabolic gene and host takeover 1 3377 3763
AKA61267.1 KP881332_p16 hypothetical protein phrog_1116 unknown function unknown function 1 9617 10096
AKA61256.1 KP881332_p5 hypothetical protein phrog_4526 unknown function unknown function -1 2970 3233
AKA61424.1 KP881332_p173 transcriptional regulator phrog_3 transcriptional repressor transcription regulation -1 130893 131108
AKA61349.1 KP881332_p98 DNA repair exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 89791 91044
AKA61396.1 KP881332_p145 hypothetical protein phrog_2884 unknown function unknown function -1 114421 114660
AKA61416.1 KP881332_p165 MbpB phrog_33985 unknown function unknown function -1 127586 127798
AKA61397.1 KP881332_p146 sensor protein phrog_98 unknown function unknown function -1 114657 115010
AKA61305.1 KP881332_p54 structural protein phrog_2665 virion structural protein head and packaging 1 51837 53762
AKA61285.1 KP881332_p34 major tail sheath protein phrog_279 tail sheath tail 1 25481 27241
AKA61306.1 KP881332_p55 hypothetical protein phrog_2671 tail fiber protein tail 1 53780 54136
AKA61417.1 KP881332_p166 hypothetical protein phrog_1817 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 127782 128411
AKA61380.1 KP881332_p129 hypothetical protein phrog_16583 unknown function unknown function 1 106613 106951
AKA61421.1 KP881332_p170 ribonuclease H phrog_25616 Rnase H DNA, RNA and nucleotide metabolism -1 129849 130067
AKA61368.1 KP881332_p117 hypothetical protein phrog_3453 unknown function unknown function 1 100996 101220
AKA61311.1 KP881332_p60 helicase/primase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 59169 60617
AKA61392.1 KP881332_p141 hypothetical protein phrog_3549 unknown function unknown function 1 112508 112768
AKA61379.1 KP881332_p128 hypothetical protein phrog_16557 unknown function unknown function 1 106420 106599
AKA61335.1 KP881332_p84 HTH homing endonuclease phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 80173 80889
AKA61340.1 KP881332_p89 endonuclease phrog_4645 endonuclease DNA, RNA and nucleotide metabolism 1 84138 85109
AKA61375.1 KP881332_p124 nuclease phrog_13453 nuclease DNA, RNA and nucleotide metabolism 1 105480 105713
AKA61361.1 KP881332_p110 hypothetical protein phrog_13266 unknown function unknown function 1 97650 97913
AKA61373.1 KP881332_p122 hypothetical protein phrog_19178 unknown function unknown function 1 103420 103797
AKA61347.1 KP881332_p96 hypothetical protein phrog_2673 unknown function unknown function 1 88774 89028
AKA61281.1 KP881332_p30 capsid protein phrog_1004 virion structural protein head and packaging 1 22902 23777
AKA61411.1 KP881332_p160 hypothetical protein phrog_2966 unknown function unknown function -1 124463 124624
AKA61418.1 KP881332_p167 phosphatase phrog_21952 RNA ligase DNA, RNA and nucleotide metabolism -1 128413 128772
AKA61261.1 KP881332_p10 hypothetical protein phrog_38778 unknown function unknown function 1 4950 5123
AKA61422.1 KP881332_p171 hypothetical protein phrog_2706 unknown function unknown function -1 130060 130248
AKA61259.1 KP881332_p8 hypothetical protein phrog_1063 terminase small subunit head and packaging 1 4019 4432
AKA61344.1 KP881332_p93 structural protein phrog_1240 Ig domain containing protein other 1 87282 87914
AKA61319.1 KP881332_p68 exonuclease phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 64186 66120
AKA61296.1 KP881332_p45 glycerophosphoryl diester phosphodiesterase phrog_2204 glycerophosphoryl diester phosphodiesterase other 1 39116 41572
AKA61315.1 KP881332_p64 hypothetical protein phrog_9725 unknown function unknown function 1 61887 62135
AKA61338.1 KP881332_p87 hypothetical protein phrog_2672 unknown function unknown function 1 82347 83522
AKA61426.1 KP881332_p175 amidase phrog_12367 endolysin lysis -1 131445 132203
AKA61300.1 KP881332_p49 tail protein phrog_6 baseplate wedge subunit tail 1 43775 44821
AKA61345.1 KP881332_p94 major tail protein phrog_341 major tail protein tail 1 87936 88448
AKA61353.1 KP881332_p102 hypothetical protein phrog_2356 unknown function unknown function 1 92726 93232
AKA61385.1 KP881332_p134 hypothetical protein phrog_12518 unknown function unknown function 1 109378 109779
AKA61406.1 KP881332_p155 nuclease phrog_452 endonuclease DNA, RNA and nucleotide metabolism -1 119041 119406
AKA61398.1 KP881332_p147 YpoX protein I phrog_98 unknown function unknown function -1 115007 115396
AKA61264.1 KP881332_p13 group I intron protein phrog_559 HNH endonuclease DNA, RNA and nucleotide metabolism 1 6831 7772
AKA61280.1 KP881332_p29 transposase phrog_506 transposase integration and excision 1 21402 22610
AKA61423.1 KP881332_p172 hypothetical protein phrog_2896 unknown function unknown function -1 130262 130909
AKA61265.1 KP881332_p14 terminase large subunit phrog_675 terminase large subunit head and packaging 1 7866 8648
AKA61351.1 KP881332_p100 hypothetical protein phrog_1080 unknown function unknown function 1 91455 91991
AKA61271.1 KP881332_p20 portal protein phrog_15361 portal protein head and packaging 1 11702 12583
AKA61263.1 KP881332_p12 terminase large subunit phrog_12876 terminase large subunit head and packaging 1 5624 6271
AKA61258.1 KP881332_p7 hypothetical protein phrog_1321 unknown function unknown function 1 3741 4022
AKA61278.1 KP881332_p27 hypothetical protein phrog_1205 unknown function unknown function 1 19973 20206
AKA61401.1 KP881332_p150 hypothetical protein phrog_2948 unknown function unknown function -1 115994 116542
AKA61428.1 KP881332_p177 holTW phrog_962 holin lysis -1 133134 133634
AKA61321.1 KP881332_p70 primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 66711 67787
AKA61405.1 KP881332_p154 ArpR DNA-binding protein phrog_14652 DNA binding protein DNA, RNA and nucleotide metabolism -1 117867 118652
AKA61272.1 KP881332_p21 transposase phrog_506 transposase integration and excision 1 13078 14331
AKA61395.1 KP881332_p144 hypothetical protein phrog_9042 unknown function unknown function -1 114058 114405
AKA61352.1 KP881332_p101 hypothetical protein phrog_984 unknown function unknown function 1 91984 92745
AKA61419.1 KP881332_p168 hypothetical protein phrog_2995 unknown function unknown function -1 128894 129544
AKA61318.1 KP881332_p67 hypothetical protein phrog_2773 unknown function unknown function 1 63927 64193
AKA61410.1 KP881332_p159 hypothetical protein phrog_3048 unknown function unknown function -1 124278 124463
AKA61390.1 KP881332_p139 hypothetical protein phrog_14210 unknown function unknown function 1 111761 112051
AKA61304.1 KP881332_p53 hypothetical protein phrog_1074 unknown function unknown function 1 51689 51859
AKA61325.1 KP881332_p74 ribonucleoside-diphosphate reductase R2/beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 69206 70543
AKA61293.1 KP881332_p42 tail lysin phrog_8949 unknown function unknown function 1 34918 35742
AKA61376.1 KP881332_p125 TreB phrog_3204 unknown function unknown function 1 105716 105901
AKA61317.1 KP881332_p66 exonuclease phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 62894 63925
AKA61283.1 KP881332_p32 hypothetical protein phrog_1000 unknown function unknown function 1 24416 25252
AKA61254.1 KP881332_p3 hypothetical protein phrog_937 hemolysin other -1 2261 2593
AKA61420.1 KP881332_p169 membrane protein phrog_3093 unknown function unknown function -1 129510 129773
AKA61310.1 KP881332_p59 Rep protein phrog_1098 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 57599 59185
AKA61303.1 KP881332_p52 adsorption associated tail protein phrog_877 unknown function unknown function 1 48179 51637
AKA61403.1 KP881332_p152 hydrolase domain protein phrog_4178 major tail protein tail -1 117237 117629
AKA61365.1 KP881332_p114 hypothetical protein phrog_13381 unknown function unknown function 1 99265 99759
AKA61323.1 KP881332_p72 hypothetical protein phrog_1095 unknown function unknown function 1 68156 68593
AKA61364.1 KP881332_p113 hypothetical protein phrog_13794 unknown function unknown function 1 98864 99130
AKA61336.1 KP881332_p85 DNA polymerase phrog_5995 DNA polymerase DNA, RNA and nucleotide metabolism 1 81113 81769
AKA61274.1 KP881332_p23 hypothetical protein phrog_4538 unknown function unknown function 1 15356 16618
AKA61262.1 KP881332_p11 hypothetical protein phrog_22897 unknown function unknown function 1 5333 5569
AKA61316.1 KP881332_p65 adenine-specific methyltransferase phrog_67 DNA methyltransferase other 1 62135 62824
AKA61284.1 KP881332_p33 hypothetical protein phrog_1151 unknown function unknown function 1 25252 25458
AKA61253.1 KP881332_p2 hypothetical protein phrog_1215 unknown function unknown function -1 2035 2250
AKA61299.1 KP881332_p48 baseplate protein phrog_975 baseplate protein tail 1 43056 43760
AKA61312.1 KP881332_p61 hypothetical protein phrog_11461 unknown function unknown function 1 60617 60874
AKA61382.1 KP881332_p131 hypothetical protein phrog_9163 unknown function unknown function 1 107424 107732
AKA61294.1 KP881332_p43 tail lysin phrog_1015 tail protein with lysin activity tail 1 35794 38226
AKA61320.1 KP881332_p69 hypothetical protein phrog_1070 anti-sigma factor moron, auxiliary metabolic gene and host takeover 1 66104 66697
AKA61409.1 KP881332_p158 hypothetical protein phrog_2708 nucleotide kinase other -1 123743 124159
AKA61339.1 KP881332_p88 recombinase A phrog_8290 RecA or Sak4, length ? other 1 83585 83809
AKA61341.1 KP881332_p90 recombination protein phrog_97 UvsX-like recombinase other 1 85257 86183
AKA61342.1 KP881332_p91 hypothetical protein phrog_1089 unknown function unknown function 1 86176 86529
AKA61377.1 KP881332_p126 hypothetical protein phrog_6981 unknown function unknown function 1 105967 106206
AKA61308.1 KP881332_p57 DNA helicase phrog_14619 DNA helicase DNA, RNA and nucleotide metabolism 1 55594 56049
AKA61288.1 KP881332_p37 hypothetical protein phrog_2754 virion structural protein head and packaging 1 29112 29420
AKA61350.1 KP881332_p99 hypothetical protein phrog_2892 unknown function unknown function 1 91056 91385
AKA61322.1 KP881332_p71 hypothetical protein phrog_1291 unknown function unknown function 1 67800 68156
AKA61384.1 KP881332_p133 hypothetical protein phrog_1709 unknown function unknown function 1 108287 108568
AKA61389.1 KP881332_p138 hypothetical protein phrog_17700 unknown function unknown function 1 111244 111396
AKA61348.1 KP881332_p97 hypothetical protein phrog_2721 unknown function unknown function 1 89028 89798
AKA61358.1 KP881332_p107 hypothetical protein phrog_2726 unknown function unknown function 1 96179 96814
AKA61386.1 KP881332_p135 hypothetical protein phrog_2601 unknown function unknown function 1 110391 110705
AKA61295.1 KP881332_p44 tail lysin phrog_2677 tail protein with lysin activity tail 1 38232 39125
AKA61329.1 KP881332_p78 hypothetical protein phrog_2797 unknown function unknown function 1 74062 74388
AKA61400.1 KP881332_p149 hypothetical protein phrog_467 unknown function unknown function -1 115584 115991
AKA61307.1 KP881332_p56 hypothetical protein phrog_2691 tail fiber protein tail 1 54142 55506
AKA61309.1 KP881332_p58 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 56276 57589
AKA61413.1 KP881332_p162 hypothetical protein phrog_2811 virion structural protein head and packaging -1 126742 127005
AKA61297.1 KP881332_p46 structural protein phrog_1011 virion structural protein head and packaging 1 41684 42535
AKA61326.1 KP881332_p75 ribonucleotide-diphosphate reductase subunit alpha phrog_12229 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 70559 72292
AKA61367.1 KP881332_p116 hypothetical protein phrog_11752 unknown function unknown function 1 100457 101008
AKA61378.1 KP881332_p127 hypothetical protein phrog_17940 unknown function unknown function 1 106207 106407
AKA61313.1 KP881332_p62 hypothetical protein phrog_12198 unknown function unknown function 1 60944 61189
AKA61394.1 KP881332_p143 hypothetical protein phrog_419 unknown function unknown function -1 113859 114137
AKA61404.1 KP881332_p153 hypothetical protein phrog_12286 unknown function unknown function -1 117650 117874
AKA61407.1 KP881332_p156 hypothetical protein phrog_19864 unknown function unknown function -1 119422 123228
AKA61279.1 KP881332_p28 hypothetical protein phrog_772 tail fiber protein tail 1 20216 20965
AKA61333.1 KP881332_p82 transposase phrog_506 transposase integration and excision 1 76113 77219
AKA61330.1 KP881332_p79 thioredoxin-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 74360 74692
AKA61331.1 KP881332_p80 hypothetical protein phrog_1054 unknown function unknown function 1 74899 75501
AKA61408.1 KP881332_p157 hypothetical protein phrog_2861 unknown function unknown function -1 123433 123768
AKA61402.1 KP881332_p151 hypothetical protein phrog_2981 unknown function unknown function -1 116660 117220
AKA61282.1 KP881332_p31 hypothetical protein phrog_1127 unknown function unknown function 1 23777 24397
AKA61388.1 KP881332_p137 hypothetical protein phrog_10311 unknown function unknown function 1 110917 111168
AKA61354.1 KP881332_p103 hypothetical protein phrog_1113 unknown function unknown function 1 93232 94086
AKA61290.1 KP881332_p39 tail morphogenetic protein phrog_1316 RNA polymerase beta subunit DNA, RNA and nucleotide metabolism 1 30029 30487
AKA61275.1 KP881332_p24 prohead protease phrog_1028 head maturation protease head and packaging 1 16684 17445
AKA61301.1 KP881332_p50 structural protein phrog_2386 virion structural protein head and packaging 1 44832 47534
AKA61289.1 KP881332_p38 hypothetical protein phrog_1038 tail assembly chaperone tail 1 29509 29937
AKA61343.1 KP881332_p92 sigma factor phrog_1025 RNA polymerase sigma factor transcription regulation 1 86414 87175
AKA61414.1 KP881332_p163 LysM domain-containing protein phrog_1274 lysM motif protein lysis -1 127019 127192
AKA61427.1 KP881332_p176 N-acetylmuramoyl-L-alanine amidase phrog_833 endolysin lysis -1 132217 133134
AKA61286.1 KP881332_p35 capsid protein phrog_985 virion structural protein head and packaging 1 27304 27642
AKA61268.1 KP881332_p17 hypothetical protein phrog_3094 unknown function unknown function 1 10139 10906
AKA61260.1 KP881332_p9 terminase large subunit phrog_5340 terminase large subunit head and packaging 1 4449 4646
AKA61298.1 KP881332_p47 structural protein phrog_1073 unknown function unknown function 1 42535 43056
AKA61287.1 KP881332_p36 hypothetical protein phrog_1905 unknown function unknown function 1 28606 29055
AKA61362.1 KP881332_p111 hypothetical protein phrog_2988 unknown function unknown function 1 98202 98504
AKA61252.1 KP881332_p1 hypothetical protein phrog_1257 ribosome associated inhibitor A; zinc finger domain moron, auxiliary metabolic gene and host takeover -1 906 1121
AKA61337.1 KP881332_p86 hypothetical protein phrog_1069 unknown function unknown function 1 81794 82276
AKA61372.1 KP881332_p121 hypothetical protein phrog_13526 unknown function unknown function 1 103048 103398
AKA61425.1 KP881332_p174 hypothetical protein phrog_2770 unknown function unknown function -1 131122 131343
AKA61291.1 KP881332_p40 tail lysin phrog_1047 tail associated lysin tail 1 30547 33534
AKA61391.1 KP881332_p140 hypothetical protein phrog_8830 unknown function unknown function 1 112189 112530
AKA61369.1 KP881332_p118 pentapeptide repeat-containing protein phrog_923 unknown function unknown function 1 101220 101939
AKA61334.1 KP881332_p83 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 77477 80002
AKA61412.1 KP881332_p161 hypothetical protein phrog_3200 unknown function unknown function -1 124624 126663
AKA61255.1 KP881332_p4 membrane protein phrog_1481 unknown function unknown function -1 2600 2932
AKA61270.1 KP881332_p19 portal protein phrog_1108 portal protein head and packaging 1 11323 11697
AKA61276.1 KP881332_p25 hypothetical protein phrog_1133 unknown function unknown function 1 17459 18394
AKA61387.1 KP881332_p136 hypothetical protein phrog_15099 unknown function unknown function 1 110775 110933
AKA61346.1 KP881332_p95 tail morphogenetic protein phrog_1696 major tail protein tail 1 88465 88677
AKA61277.1 KP881332_p26 major capsid protein phrog_752 major head protein head and packaging 1 18478 19869
AKA61399.1 KP881332_p148 hypothetical protein phrog_2532 unknown function unknown function -1 115393 115611