Genomic map of Burkholderia phage vB_BceM_AP3 (KP966108)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KP966108
Definition
Burkholderia phage vB_BceM_AP3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Kisquinquevirus; Burkholderia virus AP3.
DB of origin
NUCCORE
Length
36499
Host Name
Burkholderia cenocepacia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
64.4
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKA61147.1 KP966108_p26 hypothetical protein phrog_8746 tail fiber assembly protein tail 1 17371 17781
AKA61166.1 KP966108_p45 hypothetical protein phrog_7715 unknown function unknown function 1 30023 30217
AKA61161.1 KP966108_p40 hypothetical protein phrog_3431 Arc-like repressor transcription regulation 1 28720 28956
AKA61167.1 KP966108_p46 hypothetical protein singleton unknown function unknown function 1 30222 30677
AKA61165.1 KP966108_p44 hypothetical protein phrog_6236 unknown function unknown function 1 29785 29979
AKA61154.1 KP966108_p33 P2 GpE family protein phrog_6416 tail protein tail 1 21472 21591
AKA61164.1 KP966108_p43 hypothetical protein phrog_7831 unknown function unknown function 1 29586 29780
AKA61138.1 KP966108_p16 i-spanin phrog_4952 signal peptide motif other 1 10051 10542
AKA61136.1 KP966108_p14 holin phrog_217 holin lysis 1 8941 9261
AKA61153.1 KP966108_p32 tail protein phrog_103 tail protein tail 1 21155 21472
AKA61152.1 KP966108_p31 major tail tube protein phrog_55 head closure connector 1 20619 21128
AKA61129.1 KP966108_p7 capsid scaffolding protein phrog_73 head scaffolding protein head and packaging 1 4957 5775
AKA61158.1 KP966108_p37 glycosyl transferase phrog_2835 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 26494 27246
AKA61148.1 KP966108_p27 hypothetical protein phrog_5084 unknown function unknown function 1 17898 18236
AKA61162.1 KP966108_p41 DNA binding protein phrog_20051 DNA binding protein DNA, RNA and nucleotide metabolism 1 28960 29238
AKA61174.1 KP966108_p2 cytotoxic translational repressor of toxin-antitoxin stability system phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover -1 575 829
AKA61160.1 KP966108_p39 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 28178 28636
AKA61163.1 KP966108_p42 transcriptional regulator phrog_603 transcriptional regulator transcription regulation 1 29250 29498
AKA61159.1 KP966108_p38 alpha/beta hydrolase phrog_6521 membrane protein moron, auxiliary metabolic gene and host takeover -1 27368 28123
AKA61133.1 KP966108_p11 hypothetical protein singleton unknown function unknown function 1 8101 8355
AKA61171.1 KP966108_p50 baseplate J family protein singleton unknown function unknown function 1 34080 34691
AKA61128.1 KP966108_p6 terminase ATPase subunit phrog_2 terminase large subunit head and packaging -1 3047 4813
AKA61155.1 KP966108_p34 hypothetical protein phrog_28 tail length tape measure protein tail 1 21588 24839
AKA61151.1 KP966108_p30 tail sheath protein phrog_23 tail sheath tail 1 19417 20589
AKA61169.1 KP966108_p48 hypothetical protein phrog_5898 unknown function unknown function 1 31040 31288
AKA61127.1 KP966108_p5 portal vertex protein phrog_68 portal protein head and packaging -1 1995 3047
AKA61157.1 KP966108_p36 late control geneD protein phrog_52 tail protein tail 1 25278 26432
AKA61149.1 KP966108_p28 hypothetical protein phrog_6417 translational regulator other 1 18396 18578
AKA61175.1 KP966108_p3 hypothetical protein singleton unknown function unknown function -1 878 1168
AKA61168.1 KP966108_p47 hypothetical protein phrog_7408 unknown function unknown function 1 30681 31043
AKA61170.1 KP966108_p49 hypothetical protein phrog_5629 DNA primase DNA, RNA and nucleotide metabolism 1 31291 34083
AKA61141.1 KP966108_p20 hypothetical protein singleton unknown function unknown function 1 11498 12061
AKA61173.1 KP966108_p1 DNA-binding protein phrog_7241 transcriptional regulator transcription regulation -1 265 591
AKA61139.1 KP966108_p18 tail completion protein phrog_65 tail terminator connector 1 10539 10949
AKA61130.1 KP966108_p8 major capsid protein phrog_70 major head protein head and packaging 1 5812 6831
AKA61131.1 KP966108_p9 small terminase subunit phrog_74 terminase small subunit head and packaging 1 6828 7514
AKA61146.1 KP966108_p25 tail fiber protein phrog_17623 tail collar fiber protein tail 1 14017 17358
AKA61135.1 KP966108_p13 antiholin phrog_198 holin lysis 1 8567 8941
AKA61132.1 KP966108_p10 head completion protein phrog_71 head-tail adaptor Ad1 connector 1 7619 8101
AKA61137.1 KP966108_p15 endolysin phrog_1224 endolysin head and packaging 1 9254 10054
AKA61144.1 KP966108_p23 baseplate assembly protein phrog_6 baseplate wedge subunit tail 1 12562 13467
AKA61176.1 KP966108_p4 hypothetical protein phrog_1599 unknown function unknown function 1 1254 1967
AKA61156.1 KP966108_p35 P2 GpU family protein phrog_76 tail protein tail 1 24853 25281
AKA61172.1 KP966108_p51 integrase phrog_1 integrase integration and excision 1 34972 36048
AKA61150.1 KP966108_p29 DNA methylase N-4 phrog_67 DNA methyltransferase other 1 18556 19305
AKA61142.1 KP966108_p21 basteplate assembly protein phrog_11 baseplate spike tail 1 11556 12203
AOT28179.1 KP966108_p17 o-spanin phrog_31473 unknown function unknown function 1 10301 10495
AKA61145.1 KP966108_p24 tail protein phrog_48 tail protein tail 1 13460 14011
AKA61134.1 KP966108_p12 tail protein phrog_46 baseplate hub tail 1 8352 8564
AKA61140.1 KP966108_p19 virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector 1 10949 11398
AKA61143.1 KP966108_p22 baseplate assembly protein phrog_43 baseplate wedge subunit tail 1 12200 12565