Genomic map of Gordonia phage GMA2 (KR063281)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KR063281
Definition
Gordonia phage GMA2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
103424
Host Name
Gordonia malaquae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
126
%GC
53.37
Number of singletons
78
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKJ72547.1 KR063281_p9 structural protein phrog_776 portal protein head and packaging 1 6225 7979
AKJ72584.1 KR063281_p46 hypothetical protein singleton unknown function unknown function -1 47109 47861
AKJ72618.1 KR063281_p80 hypothetical protein singleton unknown function unknown function -1 78728 79051
AKJ72559.1 KR063281_p21 methyltransferase phrog_6608 methyltransferase other 1 19657 20244
AKJ72587.1 KR063281_p49 WhiB family protein phrog_472 WhiB transcriptional factor transcription regulation -1 50611 51057
AKJ72600.1 KR063281_p62 hypothetical protein phrog_1218 exonuclease DNA, RNA and nucleotide metabolism -1 64418 65413
AKJ72653.1 KR063281_p115 hypothetical protein singleton unknown function unknown function -1 97985 98689
AKJ72605.1 KR063281_p67 hypothetical protein phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism -1 70132 70752
AKJ72591.1 KR063281_p53 hypothetical protein singleton unknown function unknown function -1 53525 54511
AKJ72556.1 KR063281_p18 hypothetical protein singleton unknown function unknown function 1 17722 18366
AKJ72540.1 KR063281_p1 terminase phrog_2 terminase large subunit head and packaging 1 138 1817
AKJ72646.1 KR063281_p108 hypothetical protein singleton unknown function unknown function -1 94208 94429
AKJ72575.1 KR063281_p37 lysin singleton unknown function unknown function 1 40766 41137
AKJ72598.1 KR063281_p60 hypothetical protein phrog_2300 unknown function unknown function -1 62877 63482
AKJ72627.1 KR063281_p89 hypothetical protein singleton unknown function unknown function -1 81781 81942
AKJ72620.1 KR063281_p82 hypothetical protein singleton unknown function unknown function -1 79524 79829
AKJ72643.1 KR063281_p105 hypothetical protein singleton unknown function unknown function -1 92784 93677
AKJ72610.1 KR063281_p72 hypothetical protein phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 73712 74554
AKJ72557.1 KR063281_p19 hypothetical protein phrog_783 head-tail adaptor connector 1 18455 19078
AKJ72635.1 KR063281_p97 hypothetical protein singleton unknown function unknown function -1 88763 88972
AKJ72629.1 KR063281_p91 hypothetical protein singleton unknown function unknown function -1 82725 83294
AKJ72656.1 KR063281_p118 hypothetical protein singleton unknown function unknown function -1 99358 99921
AKJ72645.1 KR063281_p107 hypothetical protein phrog_780 unknown function unknown function -1 93939 94211
AKJ72619.1 KR063281_p81 hypothetical protein singleton unknown function unknown function -1 79048 79308
AKJ72662.1 KR063281_p124 hypothetical protein singleton unknown function unknown function -1 102069 102752
AKJ72579.1 KR063281_p41 hypothetical protein phrog_2344 unknown function unknown function 1 42741 43205
AKJ72663.1 KR063281_p125 hypothetical protein singleton unknown function unknown function -1 102784 103044
AKJ72542.1 KR063281_p4 hypothetical protein singleton unknown function unknown function 1 3971 4774
AKJ72566.1 KR063281_p28 tape measure protein phrog_4197 tail length tape measure protein tail 1 23414 30640
AKJ72599.1 KR063281_p61 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 63565 64314
AKJ72637.1 KR063281_p99 hypothetical protein phrog_12580 unknown function unknown function -1 89680 90450
AKJ72652.1 KR063281_p114 hypothetical protein singleton unknown function unknown function -1 97531 97956
AKJ72574.1 KR063281_p36 lysin phrog_12609 endolysin lysis 1 40019 40747
AKJ72641.1 KR063281_p103 hypothetical protein singleton unknown function unknown function -1 92154 92477
AKJ72570.1 KR063281_p32 hypothetical protein phrog_346 minor tail protein tail 1 33886 36579
AKJ72608.1 KR063281_p70 hypothetical protein phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 72861 73346
AKJ72567.1 KR063281_p29 hypothetical protein phrog_106 minor tail protein tail 1 30651 31595
AKJ72581.1 KR063281_p43 hypothetical protein singleton unknown function unknown function -1 43696 44082
AKJ72571.1 KR063281_p33 hypothetical protein phrog_32311 unknown function unknown function 1 36581 38293
AKJ72551.1 KR063281_p13 hypothetical protein singleton unknown function unknown function 1 13226 14263
AKJ72624.1 KR063281_p86 hypothetical protein singleton unknown function unknown function -1 80749 81003
AKJ72607.1 KR063281_p69 hypothetical protein singleton unknown function unknown function -1 71187 72845
AKJ72657.1 KR063281_p119 hypothetical protein singleton unknown function unknown function -1 99959 100168
AKJ72544.1 KR063281_p6 hypothetical protein singleton unknown function unknown function 1 5078 5734
AKJ72616.1 KR063281_p78 hypothetical protein singleton unknown function unknown function -1 77510 78064
AKJ72590.1 KR063281_p52 dUTPase singleton unknown function unknown function -1 52827 53375
AKJ72609.1 KR063281_p71 hypothetical protein phrog_4125 unknown function unknown function -1 73339 73629
AKJ72604.1 KR063281_p66 hypothetical protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 68344 70128
AKJ72626.1 KR063281_p88 hypothetical protein phrog_7880 unknown function unknown function -1 81347 81784
AKJ72558.1 KR063281_p20 hypothetical protein singleton unknown function unknown function 1 19143 19571
AKJ72658.1 KR063281_p120 hypothetical protein singleton unknown function unknown function -1 100181 100528
AKJ72563.1 KR063281_p25 major tail protein phrog_5 tail completion or Neck1 protein connector 1 22256 22675
AKJ72650.1 KR063281_p112 hypothetical protein phrog_22100 unknown function unknown function -1 95579 97174
AKJ72603.1 KR063281_p65 hypothetical protein singleton unknown function unknown function -1 67844 68347
AKJ72589.1 KR063281_p51 methylase phrog_116 DNA methyltransferase other -1 51538 52830
AKJ72596.1 KR063281_p58 hypothetical protein singleton unknown function unknown function -1 60616 60747
AKJ72578.1 KR063281_p40 hypothetical protein phrog_2272 unknown function unknown function 1 42184 42681
AKJ72623.1 KR063281_p85 hypothetical protein singleton unknown function unknown function -1 80348 80551
AKJ72642.1 KR063281_p104 hypothetical protein singleton unknown function unknown function -1 92474 92803
AKJ72560.1 KR063281_p22 hypothetical protein phrog_1721 galactosyl transferase moron, auxiliary metabolic gene and host takeover 1 20237 20953
AKJ72601.1 KR063281_p63 hypothetical protein singleton unknown function unknown function -1 65506 65715
AKJ72548.1 KR063281_p10 structural protein phrog_2659 RNA ligase DNA, RNA and nucleotide metabolism 1 7981 10632
AKJ72631.1 KR063281_p93 DNA primase singleton unknown function unknown function -1 83562 84947
AKJ72541.1 KR063281_p3 hypothetical protein singleton unknown function unknown function 1 3580 3978
AKJ72664.1 KR063281_p126 hypothetical protein singleton unknown function unknown function -1 103105 103344
AKJ72553.1 KR063281_p15 hypothetical protein singleton unknown function unknown function 1 15052 15183
AKJ72614.1 KR063281_p76 hypothetical protein phrog_102 endolysin lysis -1 76664 77386
AKJ72546.1 KR063281_p8 hypothetical protein singleton unknown function unknown function 1 5906 6217
AKJ72564.1 KR063281_p26 tail assembly protein singleton unknown function unknown function 1 22675 23118
AKJ72577.1 KR063281_p39 holin phrog_565 holin lysis 1 41812 42174
AKJ72612.1 KR063281_p74 hypothetical protein singleton unknown function unknown function -1 75371 75958
AKJ72648.1 KR063281_p110 hypothetical protein phrog_12293 unknown function unknown function -1 94967 95407
AKJ72565.1 KR063281_p27 tail assembly protein singleton unknown function unknown function 1 23100 23402
AKJ72654.1 KR063281_p116 hypothetical protein singleton unknown function unknown function -1 98704 98919
AKJ72568.1 KR063281_p30 hypothetical protein phrog_110 minor tail protein tail 1 31614 33245
AKJ72594.1 KR063281_p56 hypothetical protein singleton unknown function unknown function -1 56092 57162
AKJ72632.1 KR063281_p94 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism -1 85005 87089
AKJ72655.1 KR063281_p117 hypothetical protein singleton unknown function unknown function -1 98912 99322
AKJ72638.1 KR063281_p100 hypothetical protein singleton unknown function unknown function -1 91125 91364
AKJ72634.1 KR063281_p96 hypothetical protein singleton unknown function unknown function -1 87394 87714
AKJ72644.1 KR063281_p106 hypothetical protein singleton unknown function unknown function -1 93680 93946
AKJ72602.1 KR063281_p64 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 65812 67776
AKJ72550.1 KR063281_p12 hypothetical protein singleton unknown function unknown function 1 12206 13207
AKJ72649.1 KR063281_p111 hypothetical protein singleton unknown function unknown function -1 95493 95606
AKJ72588.1 KR063281_p50 hypothetical protein singleton unknown function unknown function -1 51091 51465
AKJ72582.1 KR063281_p44 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 44075 44773
AKJ72554.1 KR063281_p16 structural protein phrog_777 major head protein head and packaging 1 15295 16959
AKJ72597.1 KR063281_p59 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism -1 60935 62569
AKJ72613.1 KR063281_p75 hypothetical protein singleton unknown function unknown function -1 76020 76604
AKJ72562.1 KR063281_p24 hypothetical protein singleton unknown function unknown function 1 21753 22253
AKJ72555.1 KR063281_p17 hypothetical protein phrog_779 unknown function unknown function 1 17011 17706
AKJ72561.1 KR063281_p23 hypothetical protein phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 21038 21652
AKJ72595.1 KR063281_p57 hypothetical protein singleton unknown function unknown function -1 57205 57738
AKJ72572.1 KR063281_p34 hypothetical protein singleton unknown function unknown function 1 38290 39237
AKJ72585.1 KR063281_p47 hypothetical protein phrog_1371 unknown function unknown function -1 47995 48456
AKJ72576.1 KR063281_p38 lysin phrog_16701 peptidase other 1 41134 41802
AKJ72628.1 KR063281_p90 hypothetical protein singleton unknown function unknown function -1 82002 82721
AKJ72647.1 KR063281_p109 hypothetical protein singleton unknown function unknown function -1 94426 94866
AKJ72552.1 KR063281_p14 hypothetical protein singleton unknown function unknown function 1 14328 15059
AKJ72621.1 KR063281_p83 hypothetical protein singleton unknown function unknown function -1 79814 80008
AKJ72639.1 KR063281_p101 hypothetical protein singleton unknown function unknown function -1 91583 91927
AKJ72651.1 KR063281_p113 hypothetical protein singleton unknown function unknown function -1 97225 97428
AKJ72586.1 KR063281_p48 ATPase family protein phrog_16448 ATPase other -1 48474 50507
AKJ72633.1 KR063281_p95 hypothetical protein singleton unknown function unknown function -1 87170 87367
AKJ72617.1 KR063281_p79 hypothetical protein phrog_547 phosphoesterase other -1 78057 78731
AKJ72615.1 KR063281_p77 hypothetical protein singleton unknown function unknown function -1 77394 77513
AKJ72573.1 KR063281_p35 peptidase phrog_6007 endolysin lysis 1 39327 40022
AKJ72569.1 KR063281_p31 hypothetical protein singleton unknown function unknown function 1 33254 33889
AKJ72611.1 KR063281_p73 hypothetical protein phrog_761 thymidylate kinase other -1 74572 75363
AKJ72640.1 KR063281_p102 hypothetical protein singleton unknown function unknown function -1 91934 92176
AKJ72583.1 KR063281_p45 hypothetical protein singleton unknown function unknown function -1 44898 47093
AKJ72592.1 KR063281_p54 hypothetical protein singleton unknown function unknown function -1 54513 55700
AKJ72606.1 KR063281_p68 hypothetical protein singleton unknown function unknown function -1 70884 71072
AKJ72636.1 KR063281_p98 hypothetical protein singleton unknown function unknown function -1 89408 89671
AKJ72660.1 KR063281_p122 hypothetical protein phrog_2233 unknown function unknown function -1 100931 101578
AKJ72543.1 KR063281_p5 hypothetical protein singleton unknown function unknown function 1 4814 5041
AKJ72630.1 KR063281_p92 hypothetical protein singleton unknown function unknown function -1 83392 83565
AKJ72622.1 KR063281_p84 hypothetical protein phrog_419 unknown function unknown function -1 80010 80351
AKJ72625.1 KR063281_p87 hypothetical protein singleton unknown function unknown function -1 81000 81263
AKJ72539.1 KR063281_p2 hypothetical protein singleton unknown function unknown function 1 1862 3583
AKJ72659.1 KR063281_p121 hypothetical protein singleton unknown function unknown function -1 100688 100930
AKJ72545.1 KR063281_p7 hypothetical protein singleton unknown function unknown function 1 5731 5916
AKJ72593.1 KR063281_p55 hypothetical protein singleton unknown function unknown function -1 55700 56095
AKJ72661.1 KR063281_p123 hypothetical protein singleton unknown function unknown function -1 101652 102011
AKJ72549.1 KR063281_p11 hypothetical protein singleton unknown function unknown function 1 10696 12123
AKJ72580.1 KR063281_p42 hypothetical protein phrog_19565 membrane protein moron, auxiliary metabolic gene and host takeover 1 43216 43593