Genomic map of Mycobacterium phage Corofin (KR080205)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KR080205
Definition
Mycobacterium phage Corofin, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus; unclassified Pipefishvirus.
DB of origin
PVOG
Length
68685
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
103
%GC
67.51
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKG94845.1 KR080205_p46 lysin A phrog_700 endolysin lysis 1 40293 41558
AKG94823.1 KR080205_p24 hypothetical protein phrog_810 unknown function unknown function 1 18501 19022
AKG94867.1 KR080205_p68 hypothetical protein phrog_1016 unknown function unknown function 1 57277 57564
AKG94862.1 KR080205_p63 hypothetical protein phrog_6735 unknown function unknown function -1 55032 55151
AKG94835.1 KR080205_p36 minor tail protein phrog_282 unknown function unknown function 1 34302 34955
AKG94810.1 KR080205_p11 portal phrog_776 portal protein head and packaging 1 6339 8243
AKG94826.1 KR080205_p27 hypothetical protein phrog_1118 tail assembly chaperone tail 1 19801 20394
AKG94868.1 KR080205_p69 hypothetical protein phrog_6404 unknown function unknown function 1 57561 57791
AKG94859.1 KR080205_p60 hypothetical protein phrog_6936 unknown function unknown function -1 53979 54116
AKG94856.1 KR080205_p57 hypothetical protein phrog_6342 unknown function unknown function -1 51120 51893
AKG94874.1 KR080205_p75 hypothetical protein phrog_6511 unknown function unknown function 1 59416 59568
AKG94897.1 KR080205_p98 hypothetical protein phrog_2972 unknown function unknown function -1 67047 67283
AKG94896.1 KR080205_p97 hypothetical protein phrog_1221 unknown function unknown function -1 65861 66919
AKG94880.1 KR080205_p81 hypothetical protein phrog_4461 unknown function unknown function -1 61279 61377
AKG94802.1 KR080205_p3 hypothetical protein phrog_6307 unknown function unknown function 1 851 1072
AKG94817.1 KR080205_p18 hypothetical protein phrog_2272 unknown function unknown function 1 15028 15489
AKG94881.1 KR080205_p82 hypothetical protein phrog_6304 unknown function unknown function -1 61374 61538
AKG94806.1 KR080205_p7 hypothetical protein phrog_6317 unknown function unknown function -1 4612 4863
AKG94843.1 KR080205_p44 HTH DNA binding domain protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 39050 39535
AKG94861.1 KR080205_p62 hypothetical protein phrog_993 unknown function unknown function -1 54556 55032
AKG94860.1 KR080205_p61 hypothetical protein phrog_3025 unknown function unknown function -1 54113 54559
AKG94812.1 KR080205_p13 hypothetical protein phrog_2069 unknown function unknown function 1 10665 10871
AKG94834.1 KR080205_p35 minor tail protein phrog_948 unknown function unknown function 1 33866 34291
AKG94857.1 KR080205_p58 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 51890 53707
AKG94831.1 KR080205_p32 minor tail protein phrog_356 minor tail protein tail 1 30865 32247
AKG94855.1 KR080205_p56 RecA phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 48483 51086
AKG94853.1 KR080205_p54 hypothetical protein phrog_3892 unknown function unknown function -1 47641 47970
AKG94850.1 KR080205_p51 hypothetical protein phrog_780 unknown function unknown function -1 45168 45437
AKG94805.1 KR080205_p6 terminase large subunit phrog_38 terminase large subunit head and packaging 1 2714 4471
AKG94836.1 KR080205_p37 minor tail protein phrog_282 unknown function unknown function 1 34952 35551
AKG94807.1 KR080205_p8 RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 4860 5438
AKG94884.1 KR080205_p85 hypothetical protein phrog_4392 unknown function unknown function -1 61853 62209
AKG94814.1 KR080205_p15 hypothetical protein phrog_779 unknown function unknown function 1 13165 13974
AKG94808.1 KR080205_p9 hypothetical protein phrog_6276 unknown function unknown function -1 5573 5869
AKG94899.1 KR080205_p100 hypothetical protein phrog_5733 unknown function unknown function 1 67645 67890
AKG94889.1 KR080205_p90 hypothetical protein phrog_5355 unknown function unknown function -1 63310 63465
AKG94818.1 KR080205_p19 hypothetical protein phrog_2344 unknown function unknown function 1 15486 15965
AKG94824.1 KR080205_p25 hypothetical protein phrog_901 unknown function unknown function 1 19033 19404
AKG94837.1 KR080205_p38 minor tail protein phrog_3329 unknown function unknown function 1 35548 36897
AKG94876.1 KR080205_p77 hypothetical protein phrog_928 unknown function unknown function 1 59896 60423
AKG94877.1 KR080205_p78 hypothetical protein phrog_4974 unknown function unknown function -1 60436 60624
AKG94885.1 KR080205_p86 hypothetical protein phrog_7541 unknown function unknown function -1 62206 62538
AKG94848.1 KR080205_p49 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 43287 44900
AKG94893.1 KR080205_p94 hypothetical protein phrog_6114 unknown function unknown function -1 64558 64737
AKG94888.1 KR080205_p89 RNase phrog_2089 unknown function unknown function -1 63101 63313
AKG94822.1 KR080205_p23 hypothetical protein phrog_783 head-tail adaptor connector 1 17764 18504
AKG94863.1 KR080205_p64 hypothetical protein phrog_6656 unknown function unknown function -1 55188 55418
AKG94803.1 KR080205_p4 PAPS reductase phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 1069 2151
AKG94838.1 KR080205_p39 hypothetical protein phrog_915 unknown function unknown function 1 36920 37288
AKG94847.1 KR080205_p48 hypothetical protein phrog_870 unknown function unknown function -1 42693 43238
AKG94872.1 KR080205_p73 hypothetical protein phrog_4885 unknown function unknown function 1 58964 59221
AKG94829.1 KR080205_p30 minor tail protein phrog_837 minor tail protein tail 1 27598 28641
AKG94825.1 KR080205_p26 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 19388 19801
AKG94894.1 KR080205_p95 hypothetical protein phrog_6469 unknown function unknown function -1 64734 65201
AKG94819.1 KR080205_p20 hypothetical protein phrog_2525 unknown function unknown function 1 15962 16294
AKG94898.1 KR080205_p99 hypothetical protein phrog_4825 unknown function unknown function 1 67461 67634
AKG94827.1 KR080205_p28 tapemeasure phrog_934 tail length tape measure protein tail 1 20420 26161
AKG94841.1 KR080205_p42 hypothetical protein phrog_2804 virion structural protein head and packaging 1 38036 38761
AKG94821.1 KR080205_p22 hypothetical protein phrog_6514 unknown function unknown function -1 17523 17633
AKG94871.1 KR080205_p72 hypothetical protein phrog_1031 unknown function unknown function 1 58553 58957
AKG94879.1 KR080205_p80 HNH endonuclease phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 60957 61286
AKG94839.1 KR080205_p40 hypothetical protein phrog_941 unknown function unknown function 1 37372 37608
AKG94854.1 KR080205_p55 hypothetical protein phrog_1371 unknown function unknown function -1 47967 48440
AKG94892.1 KR080205_p93 hypothetical protein phrog_5411 HNH endonuclease DNA, RNA and nucleotide metabolism -1 64178 64561
AKG94815.1 KR080205_p16 hypothetical protein phrog_970 unknown function unknown function 1 13989 14594
AKG94873.1 KR080205_p74 hypothetical protein phrog_1306 unknown function unknown function -1 59227 59397
AKG94840.1 KR080205_p41 hypothetical protein phrog_892 tail fiber protein tail 1 37626 38036
AKG94882.1 KR080205_p83 hypothetical protein phrog_6460 unknown function unknown function -1 61535 61705
AKG94846.1 KR080205_p47 lysin B phrog_102 endolysin lysis 1 41559 42623
AKG94858.1 KR080205_p59 hypothetical protein phrog_6482 unknown function unknown function -1 53707 53982
AKG94875.1 KR080205_p76 hypothetical protein phrog_6229 unknown function unknown function 1 59579 59914
AKG94833.1 KR080205_p34 minor tail protein phrog_240 head protein head and packaging 1 33474 33857
AKG94816.1 KR080205_p17 hypothetical protein phrog_565 holin lysis 1 14591 15025
AKG94844.1 KR080205_p45 hypothetical protein phrog_636 unknown function unknown function -1 39532 40230
AKG94866.1 KR080205_p67 hypothetical protein phrog_996 unknown function unknown function 1 56513 57280
AKG94883.1 KR080205_p84 hypothetical protein phrog_6338 unknown function unknown function -1 61702 61860
AKG94820.1 KR080205_p21 major tail subunit phrog_792 major tail protein tail 1 16382 17461
AKG94891.1 KR080205_p92 hypothetical protein phrog_6428 unknown function unknown function -1 63966 64181
AKG94890.1 KR080205_p91 hypothetical protein phrog_6199 unknown function unknown function -1 63540 63899
AKG94809.1 KR080205_p10 hypothetical protein phrog_781 unknown function unknown function 1 5974 6309
AKG94804.1 KR080205_p5 hypothetical protein phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 2148 2717
AKG94886.1 KR080205_p87 hypothetical protein phrog_7414 unknown function unknown function -1 62535 62822
AKG94830.1 KR080205_p31 minor tail protein phrog_746 minor tail protein tail 1 28638 30863
AKG94887.1 KR080205_p88 hypothetical protein phrog_7490 unknown function unknown function -1 62819 63007
AKG94849.1 KR080205_p50 hypothetical protein phrog_7519 unknown function unknown function -1 44900 45079
AKG94813.1 KR080205_p14 major capsid protein phrog_777 major head protein head and packaging 1 11051 13066
AKG94878.1 KR080205_p79 hypothetical protein phrog_6691 unknown function unknown function -1 60679 60960
AKG94800.1 KR080205_p1 hypothetical protein phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 1 693
AKG94842.1 KR080205_p43 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 38817 39053
AKG94895.1 KR080205_p96 hypothetical protein phrog_1010 unknown function unknown function -1 65299 65787
AKG94852.1 KR080205_p53 hypothetical protein phrog_6400 unknown function unknown function -1 47279 47641
AKG94864.1 KR080205_p65 hypothetical protein phrog_6105 unknown function unknown function -1 55415 55840
AKG94828.1 KR080205_p29 minor tail protein phrog_838 unknown function unknown function 1 26171 27601
AKG94902.1 KR080205_p103 hypothetical protein phrog_5930 unknown function unknown function 1 68334 68636
AKG94851.1 KR080205_p52 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 45483 47252
AKG94801.1 KR080205_p2 hypothetical protein phrog_6919 unknown function unknown function 1 690 854
AKG94832.1 KR080205_p33 minor tail protein singleton unknown function unknown function 1 32244 33461
AKG94811.1 KR080205_p12 capsid morphogenesis protein phrog_859 portal protein head and packaging 1 8233 10665
AKG94865.1 KR080205_p66 hypothetical protein phrog_982 unknown function unknown function -1 55842 56111
AKG94900.1 KR080205_p101 hypothetical protein phrog_6097 unknown function unknown function 1 67887 68123
AKG94901.1 KR080205_p102 hypothetical protein phrog_6432 unknown function unknown function 1 68114 68269
AKG94870.1 KR080205_p71 RNaseE phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 57949 58548
AKG94869.1 KR080205_p70 hypothetical protein phrog_4938 unknown function unknown function 1 57788 57952