| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KR296686 |
Definition |
Salmonella phage 22, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Lederbergvirus; Salmonella virus P22. |
DB of origin |
PVOG |
Length |
41733 |
Host Name |
Salmonella typhimurium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
80 |
%GC |
47.11 |
Number of singletons |
10 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AKJ74314.1 | KR296686_p7 | hypothetical protein | phrog_2 | terminase large subunit | head and packaging | -1 | 4528 | 5766 |
| AKJ74350.1 | KR296686_p43 | hypothetical protein | phrog_1117 | unknown function | unknown function | 1 | 21061 | 21231 |
| AKJ74357.1 | KR296686_p50 | hypothetical protein | phrog_2945 | unknown function | unknown function | 1 | 24018 | 24215 |
| AKJ74340.1 | KR296686_p33 | restriction alleviation | phrog_1055 | restriction alleviation ral | DNA, RNA and nucleotide metabolism | 1 | 18180 | 18332 |
| AKJ74313.1 | KR296686_p6 | hypothetical protein | phrog_30463 | unknown function | unknown function | -1 | 4268 | 4573 |
| AKJ74309.1 | KR296686_p2 | coat protein | phrog_22632 | head protein | head and packaging | -1 | 623 | 1168 |
| AKJ74383.1 | KR296686_p76 | DNA stabilization protein | phrog_1219 | tail needle protein | tail | -1 | 38741 | 39442 |
| AKJ74355.1 | KR296686_p48 | VrlC-like protein | phrog_8222 | unknown function | unknown function | 1 | 22776 | 22964 |
| AKJ74365.1 | KR296686_p58 | hypothetical protein | phrog_34380 | unknown function | unknown function | 1 | 28854 | 28970 |
| AKJ74386.1 | KR296686_p79 | hypothetical protein | phrog_1175 | unknown function | unknown function | -1 | 41308 | 41517 |
| AKJ74308.1 | KR296686_p1 | coat protein | singleton | unknown function | unknown function | -1 | 42 | 515 |
| AKJ74368.1 | KR296686_p61 | receptor-binding protein | singleton | unknown function | unknown function | -1 | 30272 | 30877 |
| AKJ74363.1 | KR296686_p56 | endolysin | phrog_841 | GtrB-like O-antigen conversion | moron, auxiliary metabolic gene and host takeover | 1 | 27370 | 27960 |
| AKJ74338.1 | KR296686_p31 | hypothetical protein | phrog_271 | anti-termination protein N-like | transcription regulation | 1 | 17023 | 17325 |
| AKJ74341.1 | KR296686_p34 | DNA adenine methylase | phrog_1273 | unknown function | unknown function | 1 | 18369 | 18605 |
| AKJ74333.1 | KR296686_p26 | hypothetical protein | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 13009 | 14385 |
| AKJ74378.1 | KR296686_p71 | tail fiber | phrog_36260 | tail fiber protein | tail | -1 | 36171 | 36446 |
| AKJ74374.1 | KR296686_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33828 | 34079 |
| AKJ74331.1 | KR296686_p24 | hypothetical protein | phrog_72 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | -1 | 12499 | 12714 |
| AKJ74377.1 | KR296686_p70 | transglycosylase | phrog_29864 | transglycosylase | other | -1 | 35173 | 36171 |
| AKJ74352.1 | KR296686_p45 | tail component protein | phrog_6018 | unknown function | unknown function | 1 | 21825 | 22184 |
| AKJ74330.1 | KR296686_p23 | hypothetical protein | phrog_32968 | unknown function | unknown function | -1 | 12208 | 12363 |
| AKJ74317.1 | KR296686_p10 | hypothetical protein | phrog_571 | unknown function | unknown function | -1 | 6437 | 6679 |
| AKJ74364.1 | KR296686_p57 | TerL | phrog_21875 | GtrC-like O-antigen conversion translocase | moron, auxiliary metabolic gene and host takeover | 1 | 27950 | 28714 |
| AKJ74339.1 | KR296686_p32 | superinfection exclusion protein B | phrog_1301 | superinfection exclusion; inhibits SieB | moron, auxiliary metabolic gene and host takeover | -1 | 17346 | 17924 |
| AKJ74370.1 | KR296686_p63 | antirepressor protein | phrog_245 | anti-repressor Ant | transcription regulation | -1 | 31667 | 32569 |
| AKJ74358.1 | KR296686_p51 | DNA methyl transferase | phrog_2260 | unknown function | unknown function | 1 | 24297 | 24815 |
| AKJ74336.1 | KR296686_p29 | transcriptional activator | phrog_191 | CII-like transcriptional activator | transcription regulation | -1 | 15370 | 15648 |
| AKJ74329.1 | KR296686_p22 | hypothetical protein | phrog_444 | unknown function | unknown function | -1 | 11853 | 12185 |
| AKJ74319.1 | KR296686_p12 | antirepressor | phrog_20738 | anti-repressor | transcription regulation | -1 | 7534 | 7812 |
| AKJ74356.1 | KR296686_p49 | EaA protein | phrog_60 | unknown function | unknown function | 1 | 22968 | 23921 |
| AKJ74371.1 | KR296686_p64 | regulatory protein | phrog_228 | Arc-like repressor | transcription regulation | -1 | 32638 | 32799 |
| AKJ74311.1 | KR296686_p4 | hypothetical protein | phrog_29269 | head scaffolding protein | head and packaging | -1 | 1850 | 2077 |
| AKJ74347.1 | KR296686_p40 | essential recombination function protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 19810 | 20427 |
| AKJ74332.1 | KR296686_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 12756 | 12935 |
| AKJ74359.1 | KR296686_p52 | hypothetical protein | phrog_22326 | unknown function | unknown function | 1 | 24790 | 24930 |
| AKJ74315.1 | KR296686_p8 | hypothetical protein | phrog_606 | terminase small subunit | head and packaging | -1 | 5744 | 6232 |
| AKJ74360.1 | KR296686_p53 | integrase | phrog_10426 | integrase | integration and excision | 1 | 25160 | 25741 |
| AKJ74362.1 | KR296686_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27029 | 27178 |
| AKJ74351.1 | KR296686_p44 | hypothetical protein | phrog_614 | unknown function | unknown function | 1 | 21219 | 21716 |
| AKJ74337.1 | KR296686_p30 | hypothetical protein | phrog_4 | transcriptional repressor | transcription regulation | 1 | 16098 | 16574 |
| AKJ74334.1 | KR296686_p27 | DNA replication protein | phrog_345 | replication initiation O-like | DNA, RNA and nucleotide metabolism | -1 | 14444 | 15196 |
| AKJ74335.1 | KR296686_p28 | hypothetical protein | phrog_1913 | tail protein | tail | -1 | 15189 | 15335 |
| AKJ74325.1 | KR296686_p18 | hypothetical protein | phrog_268 | unknown function | unknown function | -1 | 10659 | 10862 |
| AKJ74322.1 | KR296686_p15 | hypothetical protein | phrog_7 | endolysin | lysis | -1 | 8700 | 9446 |
| AKJ74385.1 | KR296686_p78 | hypothetical protein | phrog_637 | head-tail adaptor Ad3 | connector | -1 | 40824 | 41324 |
| AKJ74344.1 | KR296686_p37 | CIII protein | phrog_550 | CIII anti-termination | transcription regulation | 1 | 19353 | 19511 |
| AKJ74367.1 | KR296686_p60 | receptor-binding protein | phrog_23354 | tail spike protein | tail | -1 | 29460 | 30257 |
| AKJ74354.1 | KR296686_p47 | hypothetical protein | phrog_32305 | unknown function | unknown function | 1 | 22642 | 22773 |
| AKJ74361.1 | KR296686_p54 | integrase | phrog_1 | integrase | integration and excision | 1 | 25738 | 26322 |
| AKJ74345.1 | KR296686_p38 | hypothetical protein | phrog_2394 | Kil protein for bacterial septation inhibition | other | 1 | 19492 | 19680 |
| AKJ74316.1 | KR296686_p9 | site-specific recombinase | phrog_3546 | unknown function | unknown function | -1 | 6256 | 6435 |
| AKJ74343.1 | KR296686_p36 | superinfection exclusion protein | phrog_1510 | superinfection exclusion | moron, auxiliary metabolic gene and host takeover | 1 | 18956 | 19267 |
| AKJ74379.1 | KR296686_p72 | hypothetical protein | phrog_917 | released from the phage upon host infection | other | -1 | 36628 | 37584 |
| AKJ74312.1 | KR296686_p5 | hypothetical protein | phrog_156 | portal protein | head and packaging | -1 | 2091 | 4268 |
| AKJ74382.1 | KR296686_p75 | hypothetical protein | phrog_651 | head morphogenesis | head and packaging | -1 | 38286 | 38741 |
| AKJ74366.1 | KR296686_p59 | nucleoside 2-deoxyribosyltransferase | singleton | unknown function | unknown function | 1 | 29117 | 29401 |
| AKJ74327.1 | KR296686_p20 | NinG protein | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 11080 | 11691 |
| AKJ74318.1 | KR296686_p11 | hypothetical protein | phrog_16546 | unknown function | unknown function | 1 | 6987 | 7247 |
| AKJ74326.1 | KR296686_p19 | hypothetical protein | phrog_3496 | unknown function | unknown function | -1 | 10859 | 11083 |
| AKJ74381.1 | KR296686_p74 | terminase | singleton | unknown function | unknown function | -1 | 38125 | 38283 |
| AKJ74384.1 | KR296686_p77 | DNA stabilization protein | phrog_578 | head closure Hc3 | connector | -1 | 39446 | 40831 |
| AKJ74372.1 | KR296686_p65 | tubulin/FtsZ family GTPase domain protein | singleton | unknown function | unknown function | 1 | 33240 | 33389 |
| AKJ74376.1 | KR296686_p69 | head morphogeneis protein | phrog_29117 | head morphogenesis | head and packaging | -1 | 34343 | 35164 |
| AKJ74310.1 | KR296686_p3 | hypothetical protein | phrog_648 | head scaffolding protein | head and packaging | -1 | 1168 | 1842 |
| AKJ74373.1 | KR296686_p66 | hypothetical protein | phrog_1365 | unknown function | unknown function | -1 | 33432 | 33797 |
| AKJ74346.1 | KR296686_p39 | hypothetical protein | phrog_2445 | Erf recombination cofactor Arf | DNA, RNA and nucleotide metabolism | 1 | 19670 | 19813 |
| AKJ74380.1 | KR296686_p73 | DNA transfer protein | phrog_598 | DNA ejection | DNA, RNA and nucleotide metabolism | -1 | 37595 | 38128 |
| AKJ74323.1 | KR296686_p16 | antitermination protein | phrog_127 | anti-termination protein Q-like | transcription regulation | -1 | 9879 | 10502 |
| AKJ74387.1 | KR296686_p80 | coat protein | phrog_26732 | head protein | head and packaging | -1 | 41556 | 41723 |
| AKJ74324.1 | KR296686_p17 | hypothetical protein | phrog_1402 | unknown function | unknown function | -1 | 10499 | 10678 |
| AKJ74353.1 | KR296686_p46 | hypothetical protein | phrog_38306 | unknown function | unknown function | 1 | 22181 | 22672 |
| AKJ74349.1 | KR296686_p42 | ABC transporter ATP-binding protein | phrog_656 | abc2 anti-RecBCD | moron, auxiliary metabolic gene and host takeover | 1 | 20856 | 21050 |
| AKJ74342.1 | KR296686_p35 | EaA protein | phrog_924 | unknown function | unknown function | 1 | 18605 | 18808 |
| AKJ74375.1 | KR296686_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34093 | 34221 |
| AKJ74321.1 | KR296686_p14 | endopeptidase | phrog_13 | Rz-like spanin | lysis | -1 | 8320 | 8703 |
| AKJ74348.1 | KR296686_p41 | hypothetical protein | phrog_323 | transcriptional regulator, D5-like | transcription regulation | 1 | 20457 | 20711 |
| AKJ74369.1 | KR296686_p62 | tail spike protein | singleton | unknown function | unknown function | -1 | 30963 | 31460 |
| AKJ74328.1 | KR296686_p21 | hypothetical protein | phrog_672 | unknown function | unknown function | -1 | 11684 | 11860 |
| AKJ74320.1 | KR296686_p13 | antirepressor | phrog_15204 | anti-repressor | transcription regulation | -1 | 7845 | 8117 |