Genomic map of Salmonella phage 22 (KR296686)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KR296686
Definition
Salmonella phage 22, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Lederbergvirus; Salmonella virus P22.
DB of origin
PVOG
Length
41733
Host Name
Salmonella typhimurium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
47.11
Number of singletons
10
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKJ74314.1 KR296686_p7 hypothetical protein phrog_2 terminase large subunit head and packaging -1 4528 5766
AKJ74350.1 KR296686_p43 hypothetical protein phrog_1117 unknown function unknown function 1 21061 21231
AKJ74357.1 KR296686_p50 hypothetical protein phrog_2945 unknown function unknown function 1 24018 24215
AKJ74340.1 KR296686_p33 restriction alleviation phrog_1055 restriction alleviation ral DNA, RNA and nucleotide metabolism 1 18180 18332
AKJ74313.1 KR296686_p6 hypothetical protein phrog_30463 unknown function unknown function -1 4268 4573
AKJ74309.1 KR296686_p2 coat protein phrog_22632 head protein head and packaging -1 623 1168
AKJ74383.1 KR296686_p76 DNA stabilization protein phrog_1219 tail needle protein tail -1 38741 39442
AKJ74355.1 KR296686_p48 VrlC-like protein phrog_8222 unknown function unknown function 1 22776 22964
AKJ74365.1 KR296686_p58 hypothetical protein phrog_34380 unknown function unknown function 1 28854 28970
AKJ74386.1 KR296686_p79 hypothetical protein phrog_1175 unknown function unknown function -1 41308 41517
AKJ74308.1 KR296686_p1 coat protein singleton unknown function unknown function -1 42 515
AKJ74368.1 KR296686_p61 receptor-binding protein singleton unknown function unknown function -1 30272 30877
AKJ74363.1 KR296686_p56 endolysin phrog_841 GtrB-like O-antigen conversion moron, auxiliary metabolic gene and host takeover 1 27370 27960
AKJ74338.1 KR296686_p31 hypothetical protein phrog_271 anti-termination protein N-like transcription regulation 1 17023 17325
AKJ74341.1 KR296686_p34 DNA adenine methylase phrog_1273 unknown function unknown function 1 18369 18605
AKJ74333.1 KR296686_p26 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 13009 14385
AKJ74378.1 KR296686_p71 tail fiber phrog_36260 tail fiber protein tail -1 36171 36446
AKJ74374.1 KR296686_p67 hypothetical protein singleton unknown function unknown function 1 33828 34079
AKJ74331.1 KR296686_p24 hypothetical protein phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism -1 12499 12714
AKJ74377.1 KR296686_p70 transglycosylase phrog_29864 transglycosylase other -1 35173 36171
AKJ74352.1 KR296686_p45 tail component protein phrog_6018 unknown function unknown function 1 21825 22184
AKJ74330.1 KR296686_p23 hypothetical protein phrog_32968 unknown function unknown function -1 12208 12363
AKJ74317.1 KR296686_p10 hypothetical protein phrog_571 unknown function unknown function -1 6437 6679
AKJ74364.1 KR296686_p57 TerL phrog_21875 GtrC-like O-antigen conversion translocase moron, auxiliary metabolic gene and host takeover 1 27950 28714
AKJ74339.1 KR296686_p32 superinfection exclusion protein B phrog_1301 superinfection exclusion; inhibits SieB moron, auxiliary metabolic gene and host takeover -1 17346 17924
AKJ74370.1 KR296686_p63 antirepressor protein phrog_245 anti-repressor Ant transcription regulation -1 31667 32569
AKJ74358.1 KR296686_p51 DNA methyl transferase phrog_2260 unknown function unknown function 1 24297 24815
AKJ74336.1 KR296686_p29 transcriptional activator phrog_191 CII-like transcriptional activator transcription regulation -1 15370 15648
AKJ74329.1 KR296686_p22 hypothetical protein phrog_444 unknown function unknown function -1 11853 12185
AKJ74319.1 KR296686_p12 antirepressor phrog_20738 anti-repressor transcription regulation -1 7534 7812
AKJ74356.1 KR296686_p49 EaA protein phrog_60 unknown function unknown function 1 22968 23921
AKJ74371.1 KR296686_p64 regulatory protein phrog_228 Arc-like repressor transcription regulation -1 32638 32799
AKJ74311.1 KR296686_p4 hypothetical protein phrog_29269 head scaffolding protein head and packaging -1 1850 2077
AKJ74347.1 KR296686_p40 essential recombination function protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 19810 20427
AKJ74332.1 KR296686_p25 hypothetical protein singleton unknown function unknown function -1 12756 12935
AKJ74359.1 KR296686_p52 hypothetical protein phrog_22326 unknown function unknown function 1 24790 24930
AKJ74315.1 KR296686_p8 hypothetical protein phrog_606 terminase small subunit head and packaging -1 5744 6232
AKJ74360.1 KR296686_p53 integrase phrog_10426 integrase integration and excision 1 25160 25741
AKJ74362.1 KR296686_p55 hypothetical protein singleton unknown function unknown function 1 27029 27178
AKJ74351.1 KR296686_p44 hypothetical protein phrog_614 unknown function unknown function 1 21219 21716
AKJ74337.1 KR296686_p30 hypothetical protein phrog_4 transcriptional repressor transcription regulation 1 16098 16574
AKJ74334.1 KR296686_p27 DNA replication protein phrog_345 replication initiation O-like DNA, RNA and nucleotide metabolism -1 14444 15196
AKJ74335.1 KR296686_p28 hypothetical protein phrog_1913 tail protein tail -1 15189 15335
AKJ74325.1 KR296686_p18 hypothetical protein phrog_268 unknown function unknown function -1 10659 10862
AKJ74322.1 KR296686_p15 hypothetical protein phrog_7 endolysin lysis -1 8700 9446
AKJ74385.1 KR296686_p78 hypothetical protein phrog_637 head-tail adaptor Ad3 connector -1 40824 41324
AKJ74344.1 KR296686_p37 CIII protein phrog_550 CIII anti-termination transcription regulation 1 19353 19511
AKJ74367.1 KR296686_p60 receptor-binding protein phrog_23354 tail spike protein tail -1 29460 30257
AKJ74354.1 KR296686_p47 hypothetical protein phrog_32305 unknown function unknown function 1 22642 22773
AKJ74361.1 KR296686_p54 integrase phrog_1 integrase integration and excision 1 25738 26322
AKJ74345.1 KR296686_p38 hypothetical protein phrog_2394 Kil protein for bacterial septation inhibition other 1 19492 19680
AKJ74316.1 KR296686_p9 site-specific recombinase phrog_3546 unknown function unknown function -1 6256 6435
AKJ74343.1 KR296686_p36 superinfection exclusion protein phrog_1510 superinfection exclusion moron, auxiliary metabolic gene and host takeover 1 18956 19267
AKJ74379.1 KR296686_p72 hypothetical protein phrog_917 released from the phage upon host infection other -1 36628 37584
AKJ74312.1 KR296686_p5 hypothetical protein phrog_156 portal protein head and packaging -1 2091 4268
AKJ74382.1 KR296686_p75 hypothetical protein phrog_651 head morphogenesis head and packaging -1 38286 38741
AKJ74366.1 KR296686_p59 nucleoside 2-deoxyribosyltransferase singleton unknown function unknown function 1 29117 29401
AKJ74327.1 KR296686_p20 NinG protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism -1 11080 11691
AKJ74318.1 KR296686_p11 hypothetical protein phrog_16546 unknown function unknown function 1 6987 7247
AKJ74326.1 KR296686_p19 hypothetical protein phrog_3496 unknown function unknown function -1 10859 11083
AKJ74381.1 KR296686_p74 terminase singleton unknown function unknown function -1 38125 38283
AKJ74384.1 KR296686_p77 DNA stabilization protein phrog_578 head closure Hc3 connector -1 39446 40831
AKJ74372.1 KR296686_p65 tubulin/FtsZ family GTPase domain protein singleton unknown function unknown function 1 33240 33389
AKJ74376.1 KR296686_p69 head morphogeneis protein phrog_29117 head morphogenesis head and packaging -1 34343 35164
AKJ74310.1 KR296686_p3 hypothetical protein phrog_648 head scaffolding protein head and packaging -1 1168 1842
AKJ74373.1 KR296686_p66 hypothetical protein phrog_1365 unknown function unknown function -1 33432 33797
AKJ74346.1 KR296686_p39 hypothetical protein phrog_2445 Erf recombination cofactor Arf DNA, RNA and nucleotide metabolism 1 19670 19813
AKJ74380.1 KR296686_p73 DNA transfer protein phrog_598 DNA ejection DNA, RNA and nucleotide metabolism -1 37595 38128
AKJ74323.1 KR296686_p16 antitermination protein phrog_127 anti-termination protein Q-like transcription regulation -1 9879 10502
AKJ74387.1 KR296686_p80 coat protein phrog_26732 head protein head and packaging -1 41556 41723
AKJ74324.1 KR296686_p17 hypothetical protein phrog_1402 unknown function unknown function -1 10499 10678
AKJ74353.1 KR296686_p46 hypothetical protein phrog_38306 unknown function unknown function 1 22181 22672
AKJ74349.1 KR296686_p42 ABC transporter ATP-binding protein phrog_656 abc2 anti-RecBCD moron, auxiliary metabolic gene and host takeover 1 20856 21050
AKJ74342.1 KR296686_p35 EaA protein phrog_924 unknown function unknown function 1 18605 18808
AKJ74375.1 KR296686_p68 hypothetical protein singleton unknown function unknown function -1 34093 34221
AKJ74321.1 KR296686_p14 endopeptidase phrog_13 Rz-like spanin lysis -1 8320 8703
AKJ74348.1 KR296686_p41 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation 1 20457 20711
AKJ74369.1 KR296686_p62 tail spike protein singleton unknown function unknown function -1 30963 31460
AKJ74328.1 KR296686_p21 hypothetical protein phrog_672 unknown function unknown function -1 11684 11860
AKJ74320.1 KR296686_p13 antirepressor phrog_15204 anti-repressor transcription regulation -1 7845 8117