| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KR296687 |
Definition |
Salmonella phage 25, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Lederbergvirus; Salmonella virus P22. |
DB of origin |
PVOG |
Length |
41803 |
Host Name |
Salmonella typhimurium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
47.06 |
Number of singletons |
6 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AKJ74255.1 | KR296687_p23 | hypothetical protein | phrog_571 | unknown function | unknown function | -1 | 16633 | 16875 |
| AKJ74234.1 | KR296687_p2 | regulatory protein | phrog_228 | Arc-like repressor | transcription regulation | -1 | 1148 | 1309 |
| AKJ74256.1 | KR296687_p24 | hypothetical protein | phrog_16546 | unknown function | unknown function | 1 | 17182 | 17442 |
| AKJ74265.1 | KR296687_p33 | NinG protein | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 21276 | 21887 |
| AKJ74286.1 | KR296687_p54 | terminase small subunit | singleton | unknown function | unknown function | 1 | 30654 | 30767 |
| AKJ74296.1 | KR296687_p64 | hypothetical protein | phrog_2260 | unknown function | unknown function | 1 | 34495 | 35037 |
| AKJ74293.1 | KR296687_p61 | VrlC-like protein | phrog_8222 | unknown function | unknown function | 1 | 32966 | 33160 |
| AKJ74300.1 | KR296687_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36878 | 37129 |
| AKJ74237.1 | KR296687_p5 | hypothetical protein | phrog_1365 | unknown function | unknown function | -1 | 1943 | 2308 |
| AKJ74302.1 | KR296687_p70 | endolysin | phrog_841 | GtrB-like O-antigen conversion | moron, auxiliary metabolic gene and host takeover | 1 | 37701 | 38159 |
| AKJ74247.1 | KR296687_p15 | coat protein | phrog_283 | major head protein | head and packaging | -1 | 10071 | 11363 |
| AKJ74304.1 | KR296687_p72 | hypothetical protein | phrog_34380 | unknown function | unknown function | 1 | 39053 | 39184 |
| AKJ74287.1 | KR296687_p55 | ABC transporter ATP-binding protein | phrog_656 | abc2 anti-RecBCD | moron, auxiliary metabolic gene and host takeover | 1 | 30953 | 31246 |
| AKJ74248.1 | KR296687_p16 | hypothetical protein | phrog_648 | head scaffolding protein | head and packaging | -1 | 11363 | 12037 |
| AKJ74277.1 | KR296687_p45 | superinfection exclusion protein B | phrog_1301 | superinfection exclusion; inhibits SieB | moron, auxiliary metabolic gene and host takeover | -1 | 27542 | 28120 |
| AKJ74264.1 | KR296687_p32 | hypothetical protein | phrog_3496 | unknown function | unknown function | -1 | 21055 | 21279 |
| AKJ74253.1 | KR296687_p21 | hypothetical protein | phrog_606 | terminase small subunit | head and packaging | -1 | 15940 | 16434 |
| AKJ74281.1 | KR296687_p49 | superinfection exclusion protein | phrog_1510 | superinfection exclusion | moron, auxiliary metabolic gene and host takeover | 1 | 29153 | 29464 |
| AKJ74295.1 | KR296687_p63 | terminase | phrog_2945 | unknown function | unknown function | 1 | 34214 | 34393 |
| AKJ74266.1 | KR296687_p34 | hypothetical protein | phrog_672 | unknown function | unknown function | -1 | 21880 | 22056 |
| AKJ74272.1 | KR296687_p40 | DNA replication protein | singleton | unknown function | unknown function | -1 | 25195 | 25392 |
| AKJ74259.1 | KR296687_p27 | endopeptidase | phrog_13 | Rz-like spanin | lysis | -1 | 18461 | 18898 |
| AKJ74303.1 | KR296687_p71 | TerL | phrog_21875 | GtrC-like O-antigen conversion translocase | moron, auxiliary metabolic gene and host takeover | 1 | 38149 | 38829 |
| AKJ74245.1 | KR296687_p13 | hypothetical protein | phrog_637 | head-tail adaptor Ad3 | connector | -1 | 9339 | 9839 |
| AKJ74269.1 | KR296687_p37 | hypothetical protein | phrog_72 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | -1 | 22734 | 23132 |
| AKJ74273.1 | KR296687_p41 | transcriptional activator | phrog_191 | CII-like transcriptional activator | transcription regulation | -1 | 25566 | 25844 |
| AKJ74254.1 | KR296687_p22 | site-specific recombinase | phrog_3546 | unknown function | unknown function | -1 | 16452 | 16631 |
| AKJ74297.1 | KR296687_p65 | hypothetical protein | phrog_22326 | unknown function | unknown function | 1 | 34989 | 35129 |
| AKJ74244.1 | KR296687_p12 | DNA stabilization protein | phrog_578 | head closure Hc3 | connector | -1 | 7961 | 9346 |
| AKJ74241.1 | KR296687_p9 | DNA transfer protein | phrog_598 | DNA ejection | DNA, RNA and nucleotide metabolism | -1 | 6109 | 6798 |
| AKJ74290.1 | KR296687_p58 | tail component protein | phrog_6018 | unknown function | unknown function | 1 | 32021 | 32380 |
| AKJ74243.1 | KR296687_p11 | DNA stabilization protein | phrog_1219 | tail needle protein | tail | -1 | 7256 | 7957 |
| AKJ74240.1 | KR296687_p8 | hypothetical protein | phrog_917 | released from the phage upon host infection | other | -1 | 4770 | 6098 |
| AKJ74278.1 | KR296687_p46 | restriction alleviation | phrog_1055 | restriction alleviation ral | DNA, RNA and nucleotide metabolism | 1 | 28377 | 28529 |
| AKJ74270.1 | KR296687_p38 | hypothetical protein | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 23205 | 24581 |
| AKJ74307.1 | KR296687_p75 | tail spike protein | singleton | unknown function | unknown function | -1 | 41019 | 41663 |
| AKJ74292.1 | KR296687_p60 | hypothetical protein | phrog_32305 | unknown function | unknown function | 1 | 32838 | 32969 |
| AKJ74282.1 | KR296687_p50 | CIII protein | phrog_550 | CIII anti-termination | transcription regulation | 1 | 29550 | 29708 |
| AKJ74289.1 | KR296687_p57 | hypothetical protein | phrog_614 | unknown function | unknown function | 1 | 31415 | 31912 |
| AKJ74249.1 | KR296687_p17 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11992 | 12273 |
| AKJ74298.1 | KR296687_p66 | integrase | phrog_10426 | integrase | integration and excision | 1 | 35359 | 35943 |
| AKJ74236.1 | KR296687_p4 | hypothetical protein | phrog_3202 | unknown function | unknown function | 1 | 1750 | 1929 |
| AKJ74275.1 | KR296687_p43 | hypothetical protein | phrog_4 | transcriptional repressor | transcription regulation | 1 | 26217 | 26771 |
| AKJ74251.1 | KR296687_p19 | hypothetical protein | phrog_30463 | unknown function | unknown function | -1 | 14464 | 14769 |
| AKJ74268.1 | KR296687_p36 | hypothetical protein | phrog_32968 | unknown function | unknown function | -1 | 22404 | 22559 |
| AKJ74306.1 | KR296687_p74 | receptor-binding protein | phrog_23354 | tail spike protein | tail | -1 | 39661 | 40788 |
| AKJ74233.1 | KR296687_p1 | antirepressor protein | phrog_245 | anti-repressor Ant | transcription regulation | -1 | 177 | 1079 |
| AKJ74242.1 | KR296687_p10 | hypothetical protein | phrog_651 | head morphogenesis | head and packaging | -1 | 6801 | 7256 |
| AKJ74301.1 | KR296687_p69 | DNA-binding helix-turn-helix protein | phrog_841 | GtrB-like O-antigen conversion | moron, auxiliary metabolic gene and host takeover | 1 | 37228 | 37701 |
| AKJ74252.1 | KR296687_p20 | hypothetical protein | phrog_2 | terminase large subunit | head and packaging | -1 | 14724 | 15962 |
| AKJ74276.1 | KR296687_p44 | hypothetical protein | phrog_271 | anti-termination protein N-like | transcription regulation | 1 | 27219 | 27521 |
| AKJ74288.1 | KR296687_p56 | hypothetical protein | phrog_1117 | unknown function | unknown function | 1 | 31257 | 31427 |
| AKJ74294.1 | KR296687_p62 | EaA protein | phrog_60 | unknown function | unknown function | 1 | 33164 | 34117 |
| AKJ74235.1 | KR296687_p3 | regulatory protein | phrog_3178 | Arc-like DNA binding domain | transcription regulation | 1 | 1400 | 1741 |
| AKJ74299.1 | KR296687_p67 | integrase | phrog_1 | integrase | integration and excision | 1 | 35936 | 36520 |
| AKJ74279.1 | KR296687_p47 | DNA adenine methylase | phrog_1273 | unknown function | unknown function | 1 | 28566 | 28802 |
| AKJ74280.1 | KR296687_p48 | EaA protein | phrog_924 | unknown function | unknown function | 1 | 28802 | 29005 |
| AKJ74291.1 | KR296687_p59 | hypothetical protein | phrog_38306 | unknown function | unknown function | 1 | 32377 | 32868 |
| AKJ74250.1 | KR296687_p18 | hypothetical protein | phrog_156 | portal protein | head and packaging | -1 | 12287 | 14464 |
| AKJ74267.1 | KR296687_p35 | hypothetical protein | phrog_444 | unknown function | unknown function | -1 | 22049 | 22381 |
| AKJ74305.1 | KR296687_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39408 | 39602 |
| AKJ74283.1 | KR296687_p51 | hypothetical protein | phrog_2394 | Kil protein for bacterial septation inhibition | other | 1 | 29689 | 29877 |
| AKJ74261.1 | KR296687_p29 | holin | phrog_126 | holin/anti-holin | lysis | -1 | 19315 | 19641 |
| AKJ74262.1 | KR296687_p30 | antitermination protein | phrog_127 | anti-termination protein Q-like | transcription regulation | -1 | 20075 | 20698 |
| AKJ74285.1 | KR296687_p53 | essential recombination function protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 30007 | 30624 |
| AKJ74258.1 | KR296687_p26 | antirepressor | phrog_15204 | anti-repressor | transcription regulation | -1 | 18039 | 18311 |
| AKJ74284.1 | KR296687_p52 | hypothetical protein | phrog_2445 | Erf recombination cofactor Arf | DNA, RNA and nucleotide metabolism | 1 | 29867 | 30010 |
| AKJ74238.1 | KR296687_p6 | hypothetical protein | phrog_7745 | superinfection exclusion SieA-like | moron, auxiliary metabolic gene and host takeover | 1 | 2351 | 2761 |
| AKJ74271.1 | KR296687_p39 | DNA replication protein | phrog_345 | replication initiation O-like | DNA, RNA and nucleotide metabolism | -1 | 24578 | 25156 |
| AKJ74274.1 | KR296687_p42 | transcriptional activator | phrog_409 | transcriptional regulator | transcription regulation | -1 | 25951 | 26136 |
| AKJ74260.1 | KR296687_p28 | hypothetical protein | phrog_10457 | endolysin | lysis | -1 | 18895 | 19218 |
| AKJ74246.1 | KR296687_p14 | hypothetical protein | phrog_1175 | unknown function | unknown function | -1 | 9823 | 10032 |
| AKJ74257.1 | KR296687_p25 | antirepressor | phrog_20738 | anti-repressor | transcription regulation | -1 | 17728 | 18066 |
| AKJ74239.1 | KR296687_p7 | transglycosylase | phrog_770 | DNA transfer protein | other | -1 | 2855 | 4684 |
| AKJ74263.1 | KR296687_p31 | hypothetical protein | phrog_1402 | unknown function | unknown function | -1 | 20695 | 20874 |