Genomic map of Salmonella phage 25 (KR296687)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KR296687
Definition
Salmonella phage 25, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Lederbergvirus; Salmonella virus P22.
DB of origin
PVOG
Length
41803
Host Name
Salmonella typhimurium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
75
%GC
47.06
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKJ74255.1 KR296687_p23 hypothetical protein phrog_571 unknown function unknown function -1 16633 16875
AKJ74234.1 KR296687_p2 regulatory protein phrog_228 Arc-like repressor transcription regulation -1 1148 1309
AKJ74256.1 KR296687_p24 hypothetical protein phrog_16546 unknown function unknown function 1 17182 17442
AKJ74265.1 KR296687_p33 NinG protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism -1 21276 21887
AKJ74286.1 KR296687_p54 terminase small subunit singleton unknown function unknown function 1 30654 30767
AKJ74296.1 KR296687_p64 hypothetical protein phrog_2260 unknown function unknown function 1 34495 35037
AKJ74293.1 KR296687_p61 VrlC-like protein phrog_8222 unknown function unknown function 1 32966 33160
AKJ74300.1 KR296687_p68 hypothetical protein singleton unknown function unknown function -1 36878 37129
AKJ74237.1 KR296687_p5 hypothetical protein phrog_1365 unknown function unknown function -1 1943 2308
AKJ74302.1 KR296687_p70 endolysin phrog_841 GtrB-like O-antigen conversion moron, auxiliary metabolic gene and host takeover 1 37701 38159
AKJ74247.1 KR296687_p15 coat protein phrog_283 major head protein head and packaging -1 10071 11363
AKJ74304.1 KR296687_p72 hypothetical protein phrog_34380 unknown function unknown function 1 39053 39184
AKJ74287.1 KR296687_p55 ABC transporter ATP-binding protein phrog_656 abc2 anti-RecBCD moron, auxiliary metabolic gene and host takeover 1 30953 31246
AKJ74248.1 KR296687_p16 hypothetical protein phrog_648 head scaffolding protein head and packaging -1 11363 12037
AKJ74277.1 KR296687_p45 superinfection exclusion protein B phrog_1301 superinfection exclusion; inhibits SieB moron, auxiliary metabolic gene and host takeover -1 27542 28120
AKJ74264.1 KR296687_p32 hypothetical protein phrog_3496 unknown function unknown function -1 21055 21279
AKJ74253.1 KR296687_p21 hypothetical protein phrog_606 terminase small subunit head and packaging -1 15940 16434
AKJ74281.1 KR296687_p49 superinfection exclusion protein phrog_1510 superinfection exclusion moron, auxiliary metabolic gene and host takeover 1 29153 29464
AKJ74295.1 KR296687_p63 terminase phrog_2945 unknown function unknown function 1 34214 34393
AKJ74266.1 KR296687_p34 hypothetical protein phrog_672 unknown function unknown function -1 21880 22056
AKJ74272.1 KR296687_p40 DNA replication protein singleton unknown function unknown function -1 25195 25392
AKJ74259.1 KR296687_p27 endopeptidase phrog_13 Rz-like spanin lysis -1 18461 18898
AKJ74303.1 KR296687_p71 TerL phrog_21875 GtrC-like O-antigen conversion translocase moron, auxiliary metabolic gene and host takeover 1 38149 38829
AKJ74245.1 KR296687_p13 hypothetical protein phrog_637 head-tail adaptor Ad3 connector -1 9339 9839
AKJ74269.1 KR296687_p37 hypothetical protein phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism -1 22734 23132
AKJ74273.1 KR296687_p41 transcriptional activator phrog_191 CII-like transcriptional activator transcription regulation -1 25566 25844
AKJ74254.1 KR296687_p22 site-specific recombinase phrog_3546 unknown function unknown function -1 16452 16631
AKJ74297.1 KR296687_p65 hypothetical protein phrog_22326 unknown function unknown function 1 34989 35129
AKJ74244.1 KR296687_p12 DNA stabilization protein phrog_578 head closure Hc3 connector -1 7961 9346
AKJ74241.1 KR296687_p9 DNA transfer protein phrog_598 DNA ejection DNA, RNA and nucleotide metabolism -1 6109 6798
AKJ74290.1 KR296687_p58 tail component protein phrog_6018 unknown function unknown function 1 32021 32380
AKJ74243.1 KR296687_p11 DNA stabilization protein phrog_1219 tail needle protein tail -1 7256 7957
AKJ74240.1 KR296687_p8 hypothetical protein phrog_917 released from the phage upon host infection other -1 4770 6098
AKJ74278.1 KR296687_p46 restriction alleviation phrog_1055 restriction alleviation ral DNA, RNA and nucleotide metabolism 1 28377 28529
AKJ74270.1 KR296687_p38 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 23205 24581
AKJ74307.1 KR296687_p75 tail spike protein singleton unknown function unknown function -1 41019 41663
AKJ74292.1 KR296687_p60 hypothetical protein phrog_32305 unknown function unknown function 1 32838 32969
AKJ74282.1 KR296687_p50 CIII protein phrog_550 CIII anti-termination transcription regulation 1 29550 29708
AKJ74289.1 KR296687_p57 hypothetical protein phrog_614 unknown function unknown function 1 31415 31912
AKJ74249.1 KR296687_p17 hypothetical protein singleton unknown function unknown function -1 11992 12273
AKJ74298.1 KR296687_p66 integrase phrog_10426 integrase integration and excision 1 35359 35943
AKJ74236.1 KR296687_p4 hypothetical protein phrog_3202 unknown function unknown function 1 1750 1929
AKJ74275.1 KR296687_p43 hypothetical protein phrog_4 transcriptional repressor transcription regulation 1 26217 26771
AKJ74251.1 KR296687_p19 hypothetical protein phrog_30463 unknown function unknown function -1 14464 14769
AKJ74268.1 KR296687_p36 hypothetical protein phrog_32968 unknown function unknown function -1 22404 22559
AKJ74306.1 KR296687_p74 receptor-binding protein phrog_23354 tail spike protein tail -1 39661 40788
AKJ74233.1 KR296687_p1 antirepressor protein phrog_245 anti-repressor Ant transcription regulation -1 177 1079
AKJ74242.1 KR296687_p10 hypothetical protein phrog_651 head morphogenesis head and packaging -1 6801 7256
AKJ74301.1 KR296687_p69 DNA-binding helix-turn-helix protein phrog_841 GtrB-like O-antigen conversion moron, auxiliary metabolic gene and host takeover 1 37228 37701
AKJ74252.1 KR296687_p20 hypothetical protein phrog_2 terminase large subunit head and packaging -1 14724 15962
AKJ74276.1 KR296687_p44 hypothetical protein phrog_271 anti-termination protein N-like transcription regulation 1 27219 27521
AKJ74288.1 KR296687_p56 hypothetical protein phrog_1117 unknown function unknown function 1 31257 31427
AKJ74294.1 KR296687_p62 EaA protein phrog_60 unknown function unknown function 1 33164 34117
AKJ74235.1 KR296687_p3 regulatory protein phrog_3178 Arc-like DNA binding domain transcription regulation 1 1400 1741
AKJ74299.1 KR296687_p67 integrase phrog_1 integrase integration and excision 1 35936 36520
AKJ74279.1 KR296687_p47 DNA adenine methylase phrog_1273 unknown function unknown function 1 28566 28802
AKJ74280.1 KR296687_p48 EaA protein phrog_924 unknown function unknown function 1 28802 29005
AKJ74291.1 KR296687_p59 hypothetical protein phrog_38306 unknown function unknown function 1 32377 32868
AKJ74250.1 KR296687_p18 hypothetical protein phrog_156 portal protein head and packaging -1 12287 14464
AKJ74267.1 KR296687_p35 hypothetical protein phrog_444 unknown function unknown function -1 22049 22381
AKJ74305.1 KR296687_p73 hypothetical protein singleton unknown function unknown function 1 39408 39602
AKJ74283.1 KR296687_p51 hypothetical protein phrog_2394 Kil protein for bacterial septation inhibition other 1 29689 29877
AKJ74261.1 KR296687_p29 holin phrog_126 holin/anti-holin lysis -1 19315 19641
AKJ74262.1 KR296687_p30 antitermination protein phrog_127 anti-termination protein Q-like transcription regulation -1 20075 20698
AKJ74285.1 KR296687_p53 essential recombination function protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30007 30624
AKJ74258.1 KR296687_p26 antirepressor phrog_15204 anti-repressor transcription regulation -1 18039 18311
AKJ74284.1 KR296687_p52 hypothetical protein phrog_2445 Erf recombination cofactor Arf DNA, RNA and nucleotide metabolism 1 29867 30010
AKJ74238.1 KR296687_p6 hypothetical protein phrog_7745 superinfection exclusion SieA-like moron, auxiliary metabolic gene and host takeover 1 2351 2761
AKJ74271.1 KR296687_p39 DNA replication protein phrog_345 replication initiation O-like DNA, RNA and nucleotide metabolism -1 24578 25156
AKJ74274.1 KR296687_p42 transcriptional activator phrog_409 transcriptional regulator transcription regulation -1 25951 26136
AKJ74260.1 KR296687_p28 hypothetical protein phrog_10457 endolysin lysis -1 18895 19218
AKJ74246.1 KR296687_p14 hypothetical protein phrog_1175 unknown function unknown function -1 9823 10032
AKJ74257.1 KR296687_p25 antirepressor phrog_20738 anti-repressor transcription regulation -1 17728 18066
AKJ74239.1 KR296687_p7 transglycosylase phrog_770 DNA transfer protein other -1 2855 4684
AKJ74263.1 KR296687_p31 hypothetical protein phrog_1402 unknown function unknown function -1 20695 20874