| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KR296689 |
Definition |
Salmonella phage 35, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chivirus; unclassified Chivirus. |
DB of origin |
PVOG |
Length |
55391 |
Host Name |
Salmonella |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
91 |
%GC |
56.84 |
Number of singletons |
16 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AKJ74134.1 | KR296689_p71 | hypothetical protein | phrog_6886 | unknown function | unknown function | -1 | 45357 | 45890 |
| AKJ74073.1 | KR296689_p10 | hypothetical protein | phrog_141 | terminase small subunit | head and packaging | 1 | 6911 | 7360 |
| AKJ74110.1 | KR296689_p47 | mitogen-activated protein kinase kinase kinase kinase 4 isoform 4 | phrog_27578 | unknown function | unknown function | 1 | 33825 | 34124 |
| AKJ74089.1 | KR296689_p26 | transposase | phrog_5078 | tail terminator | connector | 1 | 15504 | 16007 |
| AKJ74096.1 | KR296689_p33 | resolvase | phrog_1082 | tail assembly protein | tail | 1 | 22249 | 23937 |
| AKJ74095.1 | KR296689_p32 | hypothetical protein | phrog_23940 | tail length tape measure protein | tail | 1 | 21106 | 22167 |
| AKJ74122.1 | KR296689_p59 | hypothetical protein | phrog_8264 | unknown function | unknown function | -1 | 40083 | 40367 |
| AKJ74097.1 | KR296689_p34 | hypothetical protein | phrog_35248 | unknown function | unknown function | 1 | 23947 | 24309 |
| AKJ74087.1 | KR296689_p24 | hypothetical protein | phrog_4858 | unknown function | unknown function | 1 | 14516 | 14881 |
| AKJ74116.1 | KR296689_p53 | hypothetical protein | phrog_1275 | Rz-like spanin | lysis | 1 | 37558 | 37761 |
| AKJ74091.1 | KR296689_p28 | tail length tape measure protein | phrog_5260 | tail protein | tail | 1 | 17257 | 17631 |
| AKJ74139.1 | KR296689_p76 | hypothetical protein | phrog_34064 | unknown function | unknown function | 1 | 47698 | 47865 |
| AKJ74133.1 | KR296689_p70 | hypothetical protein | phrog_8641 | unknown function | unknown function | -1 | 44755 | 45360 |
| AKJ74103.1 | KR296689_p40 | tail sheath monomer | phrog_6284 | tail protein | tail | 1 | 27707 | 29122 |
| AKJ74068.1 | KR296689_p5 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 2296 | 3003 |
| AKJ74137.1 | KR296689_p74 | tail fiber protein | phrog_7200 | unknown function | unknown function | -1 | 46572 | 46748 |
| AKJ74075.1 | KR296689_p12 | terminase large subunit | phrog_33134 | terminase large subunit | head and packaging | 1 | 8132 | 8530 |
| AKJ74119.1 | KR296689_p56 | portal protein | singleton | unknown function | unknown function | -1 | 38582 | 39118 |
| AKJ74076.1 | KR296689_p13 | head-to-tail joining protein | phrog_15 | terminase large subunit | head and packaging | 1 | 8563 | 9423 |
| AKJ74120.1 | KR296689_p57 | pre-neck appendage-like protein | phrog_8098 | unknown function | unknown function | -1 | 39108 | 39821 |
| AKJ74084.1 | KR296689_p21 | head decoration protein | singleton | unknown function | unknown function | 1 | 12759 | 13082 |
| AKJ74105.1 | KR296689_p42 | hypothetical protein | phrog_2448 | unknown function | unknown function | 1 | 29872 | 30879 |
| AKJ74065.1 | KR296689_p2 | hypothetical protein | phrog_8318 | unknown function | unknown function | 1 | 487 | 912 |
| AKJ74128.1 | KR296689_p65 | hypothetical protein | phrog_8705 | unknown function | unknown function | -1 | 41938 | 42153 |
| AKJ74153.1 | KR296689_p90 | terminase large subunit | phrog_7646 | unknown function | unknown function | 1 | 54337 | 54597 |
| AKJ74145.1 | KR296689_p82 | hypothetical protein | phrog_3199 | unknown function | unknown function | 1 | 50425 | 50964 |
| AKJ74130.1 | KR296689_p67 | hypothetical protein | phrog_8209 | unknown function | unknown function | -1 | 42361 | 42894 |
| AKJ74146.1 | KR296689_p83 | hypothetical protein | phrog_10310 | unknown function | unknown function | 1 | 51181 | 52251 |
| AKJ74078.1 | KR296689_p15 | portal protein | phrog_30178 | portal protein | head and packaging | 1 | 9685 | 10053 |
| AKJ74147.1 | KR296689_p84 | holin family protein | singleton | unknown function | unknown function | 1 | 52239 | 52364 |
| AKJ74099.1 | KR296689_p36 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 24794 | 25006 |
| AKJ74085.1 | KR296689_p22 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 13095 | 14159 |
| AKJ74131.1 | KR296689_p68 | DNA adenine methyltransferase | phrog_111 | DNA methyltransferase | other | -1 | 42972 | 43658 |
| AKJ74112.1 | KR296689_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35501 | 36262 |
| AKJ74086.1 | KR296689_p23 | hypothetical protein | phrog_7559 | unknown function | unknown function | 1 | 14221 | 14526 |
| AKJ74149.1 | KR296689_p86 | tail component K-like protein | singleton | unknown function | unknown function | 1 | 52708 | 53187 |
| AKJ74108.1 | KR296689_p45 | short transient receptor potential channel 6 isoform X1 | phrog_2448 | unknown function | unknown function | 1 | 31865 | 32884 |
| AKJ74093.1 | KR296689_p30 | tail tape measure protein | singleton | unknown function | unknown function | 1 | 17951 | 20287 |
| AKJ74118.1 | KR296689_p55 | terminase large subunit | singleton | unknown function | unknown function | -1 | 38220 | 38627 |
| AKJ74125.1 | KR296689_p62 | hypothetical protein | phrog_3012 | unknown function | unknown function | -1 | 40838 | 41119 |
| AKJ74115.1 | KR296689_p52 | long tail fiber proximal subunit | phrog_15395 | tail protein | tail | -1 | 37386 | 37556 |
| AKJ74140.1 | KR296689_p77 | coat protein | phrog_7965 | unknown function | unknown function | -1 | 47860 | 48096 |
| AKJ74148.1 | KR296689_p85 | DNA binding protein | phrog_8635 | unknown function | unknown function | 1 | 52361 | 52582 |
| AKJ74144.1 | KR296689_p81 | hypothetical protein | phrog_4445 | unknown function | unknown function | 1 | 50151 | 50411 |
| AKJ74080.1 | KR296689_p17 | portal protein | singleton | unknown function | unknown function | 1 | 10442 | 10762 |
| AKJ74104.1 | KR296689_p41 | hypothetical protein | phrog_7049 | tail fiber protein | tail | 1 | 29122 | 29862 |
| AKJ74129.1 | KR296689_p66 | hypothetical protein | phrog_9067 | unknown function | unknown function | -1 | 42156 | 42350 |
| AKJ74142.1 | KR296689_p79 | hypothetical protein | phrog_7942 | unknown function | unknown function | -1 | 48509 | 48949 |
| AKJ74124.1 | KR296689_p61 | DNA-directed DNA polymerase protein | phrog_9301 | unknown function | unknown function | -1 | 40530 | 40841 |
| AKJ74100.1 | KR296689_p37 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 25074 | 25244 |
| AKJ74154.1 | KR296689_p91 | head outer capsid protein | phrog_8116 | unknown function | unknown function | 1 | 54590 | 54826 |
| AKJ74127.1 | KR296689_p64 | hypothetical protein | phrog_9722 | unknown function | unknown function | -1 | 41694 | 41948 |
| AKJ74114.1 | KR296689_p51 | hypothetical protein | phrog_873 | endolysin | head and packaging | 1 | 36667 | 37380 |
| AKJ74077.1 | KR296689_p14 | head-to-tail joining protein | phrog_75 | head-tail adaptor Ad1 | connector | 1 | 9434 | 9688 |
| AKJ74111.1 | KR296689_p48 | site-specific recombinase | singleton | unknown function | unknown function | 1 | 34134 | 35504 |
| AKJ74074.1 | KR296689_p11 | terminase large subunit | phrog_15 | terminase large subunit | head and packaging | 1 | 7350 | 8135 |
| AKJ74069.1 | KR296689_p6 | DNA polymerase I | singleton | unknown function | unknown function | 1 | 2958 | 3506 |
| AKJ74113.1 | KR296689_p50 | hypothetical protein | phrog_7686 | Rz-like spanin | lysis | 1 | 36325 | 36663 |
| AKJ74081.1 | KR296689_p18 | portal protein | phrog_537 | portal protein | head and packaging | 1 | 10765 | 11361 |
| AKJ74083.1 | KR296689_p20 | prohead protease | phrog_17040 | head maturation protease | head and packaging | 1 | 12269 | 12673 |
| AKJ74102.1 | KR296689_p39 | tail sheath monomer | phrog_6284 | tail protein | tail | 1 | 26259 | 27710 |
| AKJ74066.1 | KR296689_p3 | hypothetical protein | phrog_3953 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 905 | 1642 |
| AKJ74094.1 | KR296689_p31 | minor tail protein | singleton | unknown function | unknown function | 1 | 20429 | 20995 |
| AKJ74132.1 | KR296689_p69 | hypothetical protein | phrog_8386 | unknown function | unknown function | -1 | 43658 | 44758 |
| AKJ74071.1 | KR296689_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4998 | 5123 |
| AKJ74070.1 | KR296689_p7 | DNA polymerase A domain | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 3506 | 4996 |
| AKJ74138.1 | KR296689_p75 | recombination associated protein | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | -1 | 46807 | 47661 |
| AKJ74106.1 | KR296689_p43 | histone-lysine N-methyltransferase | phrog_2448 | unknown function | unknown function | 1 | 30890 | 31642 |
| AKJ74141.1 | KR296689_p78 | viral integrase family 4 | phrog_7734 | unknown function | unknown function | -1 | 48187 | 48522 |
| AKJ74092.1 | KR296689_p29 | capsid assembly protein | phrog_35334 | tail length tape measure protein | tail | 1 | 17809 | 17958 |
| AKJ74064.1 | KR296689_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 172 | 336 |
| AKJ74088.1 | KR296689_p25 | hypothetical protein | phrog_27 | tail completion or Neck1 protein | connector | 1 | 14881 | 15507 |
| AKJ74152.1 | KR296689_p89 | hypothetical protein | phrog_8059 | unknown function | unknown function | 1 | 54147 | 54353 |
| AKJ74107.1 | KR296689_p44 | ATP-binding cassette sub-family C member 8 isoform 2 | singleton | unknown function | unknown function | 1 | 31639 | 31851 |
| AKJ74143.1 | KR296689_p80 | RecT family protein | phrog_6647 | unknown function | unknown function | -1 | 49020 | 49391 |
| AKJ74126.1 | KR296689_p63 | hypothetical protein | phrog_9072 | thymidylate synthase complementing protein | DNA, RNA and nucleotide metabolism | -1 | 41200 | 41712 |
| AKJ74136.1 | KR296689_p73 | endolysin | phrog_7587 | unknown function | unknown function | -1 | 46292 | 46567 |
| AKJ74090.1 | KR296689_p27 | hypothetical protein | phrog_807 | major tail protein with Ig-like domain | tail | 1 | 16021 | 17160 |
| AKJ74150.1 | KR296689_p87 | hypothetical protein | phrog_18953 | tail protein | tail | 1 | 53174 | 53860 |
| AKJ74098.1 | KR296689_p35 | hypothetical protein | phrog_28246 | tail assembly protein | tail | 1 | 24342 | 24764 |
| AKJ74067.1 | KR296689_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1693 | 2241 |
| AKJ74117.1 | KR296689_p54 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | -1 | 37762 | 38223 |
| AKJ74101.1 | KR296689_p38 | hypothetical protein | phrog_21247 | tail protein | tail | 1 | 25234 | 26262 |
| AKJ74082.1 | KR296689_p19 | prohead protease-like protein | phrog_53 | head maturation protease | head and packaging | 1 | 11403 | 12272 |
| AKJ74079.1 | KR296689_p16 | portal protein | singleton | unknown function | unknown function | 1 | 10071 | 10445 |
| AKJ74121.1 | KR296689_p58 | terminase small subunit | phrog_1714 | unknown function | unknown function | -1 | 39818 | 40081 |
| AKJ74123.1 | KR296689_p60 | hypothetical protein | phrog_33924 | unknown function | unknown function | -1 | 40375 | 40533 |
| AKJ74151.1 | KR296689_p88 | hypothetical protein | phrog_3786 | unknown function | unknown function | 1 | 53872 | 54144 |
| AKJ74072.1 | KR296689_p9 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 5330 | 6805 |
| AKJ74109.1 | KR296689_p46 | vascular endothelial growth factor receptor 1 isoform 1 precursor | phrog_31361 | unknown function | unknown function | 1 | 33259 | 33759 |
| AKJ74135.1 | KR296689_p72 | hypothetical protein | phrog_38454 | unknown function | unknown function | -1 | 45941 | 46096 |