Genomic map of Salmonella phage 35 (KR296689)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KR296689
Definition
Salmonella phage 35, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chivirus; unclassified Chivirus.
DB of origin
PVOG
Length
55391
Host Name
Salmonella
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
56.84
Number of singletons
16
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKJ74134.1 KR296689_p71 hypothetical protein phrog_6886 unknown function unknown function -1 45357 45890
AKJ74073.1 KR296689_p10 hypothetical protein phrog_141 terminase small subunit head and packaging 1 6911 7360
AKJ74110.1 KR296689_p47 mitogen-activated protein kinase kinase kinase kinase 4 isoform 4 phrog_27578 unknown function unknown function 1 33825 34124
AKJ74089.1 KR296689_p26 transposase phrog_5078 tail terminator connector 1 15504 16007
AKJ74096.1 KR296689_p33 resolvase phrog_1082 tail assembly protein tail 1 22249 23937
AKJ74095.1 KR296689_p32 hypothetical protein phrog_23940 tail length tape measure protein tail 1 21106 22167
AKJ74122.1 KR296689_p59 hypothetical protein phrog_8264 unknown function unknown function -1 40083 40367
AKJ74097.1 KR296689_p34 hypothetical protein phrog_35248 unknown function unknown function 1 23947 24309
AKJ74087.1 KR296689_p24 hypothetical protein phrog_4858 unknown function unknown function 1 14516 14881
AKJ74116.1 KR296689_p53 hypothetical protein phrog_1275 Rz-like spanin lysis 1 37558 37761
AKJ74091.1 KR296689_p28 tail length tape measure protein phrog_5260 tail protein tail 1 17257 17631
AKJ74139.1 KR296689_p76 hypothetical protein phrog_34064 unknown function unknown function 1 47698 47865
AKJ74133.1 KR296689_p70 hypothetical protein phrog_8641 unknown function unknown function -1 44755 45360
AKJ74103.1 KR296689_p40 tail sheath monomer phrog_6284 tail protein tail 1 27707 29122
AKJ74068.1 KR296689_p5 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 2296 3003
AKJ74137.1 KR296689_p74 tail fiber protein phrog_7200 unknown function unknown function -1 46572 46748
AKJ74075.1 KR296689_p12 terminase large subunit phrog_33134 terminase large subunit head and packaging 1 8132 8530
AKJ74119.1 KR296689_p56 portal protein singleton unknown function unknown function -1 38582 39118
AKJ74076.1 KR296689_p13 head-to-tail joining protein phrog_15 terminase large subunit head and packaging 1 8563 9423
AKJ74120.1 KR296689_p57 pre-neck appendage-like protein phrog_8098 unknown function unknown function -1 39108 39821
AKJ74084.1 KR296689_p21 head decoration protein singleton unknown function unknown function 1 12759 13082
AKJ74105.1 KR296689_p42 hypothetical protein phrog_2448 unknown function unknown function 1 29872 30879
AKJ74065.1 KR296689_p2 hypothetical protein phrog_8318 unknown function unknown function 1 487 912
AKJ74128.1 KR296689_p65 hypothetical protein phrog_8705 unknown function unknown function -1 41938 42153
AKJ74153.1 KR296689_p90 terminase large subunit phrog_7646 unknown function unknown function 1 54337 54597
AKJ74145.1 KR296689_p82 hypothetical protein phrog_3199 unknown function unknown function 1 50425 50964
AKJ74130.1 KR296689_p67 hypothetical protein phrog_8209 unknown function unknown function -1 42361 42894
AKJ74146.1 KR296689_p83 hypothetical protein phrog_10310 unknown function unknown function 1 51181 52251
AKJ74078.1 KR296689_p15 portal protein phrog_30178 portal protein head and packaging 1 9685 10053
AKJ74147.1 KR296689_p84 holin family protein singleton unknown function unknown function 1 52239 52364
AKJ74099.1 KR296689_p36 hypothetical protein phrog_1180 tail assembly chaperone tail 1 24794 25006
AKJ74085.1 KR296689_p22 major capsid protein phrog_29 major head protein head and packaging 1 13095 14159
AKJ74131.1 KR296689_p68 DNA adenine methyltransferase phrog_111 DNA methyltransferase other -1 42972 43658
AKJ74112.1 KR296689_p49 hypothetical protein singleton unknown function unknown function 1 35501 36262
AKJ74086.1 KR296689_p23 hypothetical protein phrog_7559 unknown function unknown function 1 14221 14526
AKJ74149.1 KR296689_p86 tail component K-like protein singleton unknown function unknown function 1 52708 53187
AKJ74108.1 KR296689_p45 short transient receptor potential channel 6 isoform X1 phrog_2448 unknown function unknown function 1 31865 32884
AKJ74093.1 KR296689_p30 tail tape measure protein singleton unknown function unknown function 1 17951 20287
AKJ74118.1 KR296689_p55 terminase large subunit singleton unknown function unknown function -1 38220 38627
AKJ74125.1 KR296689_p62 hypothetical protein phrog_3012 unknown function unknown function -1 40838 41119
AKJ74115.1 KR296689_p52 long tail fiber proximal subunit phrog_15395 tail protein tail -1 37386 37556
AKJ74140.1 KR296689_p77 coat protein phrog_7965 unknown function unknown function -1 47860 48096
AKJ74148.1 KR296689_p85 DNA binding protein phrog_8635 unknown function unknown function 1 52361 52582
AKJ74144.1 KR296689_p81 hypothetical protein phrog_4445 unknown function unknown function 1 50151 50411
AKJ74080.1 KR296689_p17 portal protein singleton unknown function unknown function 1 10442 10762
AKJ74104.1 KR296689_p41 hypothetical protein phrog_7049 tail fiber protein tail 1 29122 29862
AKJ74129.1 KR296689_p66 hypothetical protein phrog_9067 unknown function unknown function -1 42156 42350
AKJ74142.1 KR296689_p79 hypothetical protein phrog_7942 unknown function unknown function -1 48509 48949
AKJ74124.1 KR296689_p61 DNA-directed DNA polymerase protein phrog_9301 unknown function unknown function -1 40530 40841
AKJ74100.1 KR296689_p37 hypothetical protein phrog_1196 tail assembly chaperone tail 1 25074 25244
AKJ74154.1 KR296689_p91 head outer capsid protein phrog_8116 unknown function unknown function 1 54590 54826
AKJ74127.1 KR296689_p64 hypothetical protein phrog_9722 unknown function unknown function -1 41694 41948
AKJ74114.1 KR296689_p51 hypothetical protein phrog_873 endolysin head and packaging 1 36667 37380
AKJ74077.1 KR296689_p14 head-to-tail joining protein phrog_75 head-tail adaptor Ad1 connector 1 9434 9688
AKJ74111.1 KR296689_p48 site-specific recombinase singleton unknown function unknown function 1 34134 35504
AKJ74074.1 KR296689_p11 terminase large subunit phrog_15 terminase large subunit head and packaging 1 7350 8135
AKJ74069.1 KR296689_p6 DNA polymerase I singleton unknown function unknown function 1 2958 3506
AKJ74113.1 KR296689_p50 hypothetical protein phrog_7686 Rz-like spanin lysis 1 36325 36663
AKJ74081.1 KR296689_p18 portal protein phrog_537 portal protein head and packaging 1 10765 11361
AKJ74083.1 KR296689_p20 prohead protease phrog_17040 head maturation protease head and packaging 1 12269 12673
AKJ74102.1 KR296689_p39 tail sheath monomer phrog_6284 tail protein tail 1 26259 27710
AKJ74066.1 KR296689_p3 hypothetical protein phrog_3953 exonuclease DNA, RNA and nucleotide metabolism 1 905 1642
AKJ74094.1 KR296689_p31 minor tail protein singleton unknown function unknown function 1 20429 20995
AKJ74132.1 KR296689_p69 hypothetical protein phrog_8386 unknown function unknown function -1 43658 44758
AKJ74071.1 KR296689_p8 hypothetical protein singleton unknown function unknown function 1 4998 5123
AKJ74070.1 KR296689_p7 DNA polymerase A domain phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 3506 4996
AKJ74138.1 KR296689_p75 recombination associated protein phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism -1 46807 47661
AKJ74106.1 KR296689_p43 histone-lysine N-methyltransferase phrog_2448 unknown function unknown function 1 30890 31642
AKJ74141.1 KR296689_p78 viral integrase family 4 phrog_7734 unknown function unknown function -1 48187 48522
AKJ74092.1 KR296689_p29 capsid assembly protein phrog_35334 tail length tape measure protein tail 1 17809 17958
AKJ74064.1 KR296689_p1 hypothetical protein singleton unknown function unknown function 1 172 336
AKJ74088.1 KR296689_p25 hypothetical protein phrog_27 tail completion or Neck1 protein connector 1 14881 15507
AKJ74152.1 KR296689_p89 hypothetical protein phrog_8059 unknown function unknown function 1 54147 54353
AKJ74107.1 KR296689_p44 ATP-binding cassette sub-family C member 8 isoform 2 singleton unknown function unknown function 1 31639 31851
AKJ74143.1 KR296689_p80 RecT family protein phrog_6647 unknown function unknown function -1 49020 49391
AKJ74126.1 KR296689_p63 hypothetical protein phrog_9072 thymidylate synthase complementing protein DNA, RNA and nucleotide metabolism -1 41200 41712
AKJ74136.1 KR296689_p73 endolysin phrog_7587 unknown function unknown function -1 46292 46567
AKJ74090.1 KR296689_p27 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 16021 17160
AKJ74150.1 KR296689_p87 hypothetical protein phrog_18953 tail protein tail 1 53174 53860
AKJ74098.1 KR296689_p35 hypothetical protein phrog_28246 tail assembly protein tail 1 24342 24764
AKJ74067.1 KR296689_p4 hypothetical protein singleton unknown function unknown function 1 1693 2241
AKJ74117.1 KR296689_p54 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 37762 38223
AKJ74101.1 KR296689_p38 hypothetical protein phrog_21247 tail protein tail 1 25234 26262
AKJ74082.1 KR296689_p19 prohead protease-like protein phrog_53 head maturation protease head and packaging 1 11403 12272
AKJ74079.1 KR296689_p16 portal protein singleton unknown function unknown function 1 10071 10445
AKJ74121.1 KR296689_p58 terminase small subunit phrog_1714 unknown function unknown function -1 39818 40081
AKJ74123.1 KR296689_p60 hypothetical protein phrog_33924 unknown function unknown function -1 40375 40533
AKJ74151.1 KR296689_p88 hypothetical protein phrog_3786 unknown function unknown function 1 53872 54144
AKJ74072.1 KR296689_p9 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 5330 6805
AKJ74109.1 KR296689_p46 vascular endothelial growth factor receptor 1 isoform 1 precursor phrog_31361 unknown function unknown function 1 33259 33759
AKJ74135.1 KR296689_p72 hypothetical protein phrog_38454 unknown function unknown function -1 45941 46096