Genomic map of Salmonella phage 40 (KR296694)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KR296694
Definition
Salmonella phage 40, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; unclassified Vequintavirinae.
DB of origin
PVOG
Length
63263
Host Name
Salmonella
Host domain
Bacteria
Is prophage?
undef
Number of proteins
130
%GC
44.93
Number of singletons
66
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKJ73464.1 KR296694_p23 hypothetical protein phrog_4056 baseplate protein tail 1 14566 15048
AKJ73491.1 KR296694_p50 aminotransferase class-V singleton unknown function unknown function -1 28147 28278
AKJ73542.1 KR296694_p101 lysin singleton unknown function unknown function -1 49865 50197
AKJ73565.1 KR296694_p124 hypothetical protein phrog_7983 unknown function unknown function 1 60208 60618
AKJ73443.1 KR296694_p2 hypothetical protein singleton unknown function unknown function 1 604 756
AKJ73452.1 KR296694_p11 DNA polymerase singleton unknown function unknown function 1 4782 5018
AKJ73550.1 KR296694_p109 thymidine kinase phrog_10920 thymidylate kinase other -1 53298 54332
AKJ73538.1 KR296694_p97 hypothetical protein phrog_2381 unknown function unknown function -1 48582 48734
AKJ73492.1 KR296694_p51 hypothetical protein phrog_3462 nicotinamide-nucleotide adenylyltransferase moron, auxiliary metabolic gene and host takeover -1 28233 29219
AKJ73481.1 KR296694_p40 permease protein phrog_16320 unknown function unknown function -1 24511 24798
AKJ73507.1 KR296694_p66 DNA ligase phrog_10936 DNA ligase DNA, RNA and nucleotide metabolism -1 37301 37624
AKJ73505.1 KR296694_p64 hypothetical protein singleton unknown function unknown function -1 36690 36821
AKJ73551.1 KR296694_p110 postulated decoy protein phrog_3118 HNH endonuclease DNA, RNA and nucleotide metabolism 1 54458 55315
AKJ73472.1 KR296694_p31 hypothetical protein singleton unknown function unknown function 1 20565 20810
AKJ73499.1 KR296694_p58 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 31481 33307
AKJ73547.1 KR296694_p106 hypothetical protein singleton unknown function unknown function -1 51956 52348
AKJ73534.1 KR296694_p93 hypothetical protein singleton unknown function unknown function -1 47749 47928
AKJ73442.1 KR296694_p1 hypothetical protein singleton unknown function unknown function 1 353 517
AKJ73528.1 KR296694_p87 hypothetical protein phrog_8277 unknown function unknown function -1 45688 45918
AKJ73468.1 KR296694_p27 hypothetical protein singleton unknown function unknown function 1 17048 17209
AKJ73515.1 KR296694_p74 hypothetical protein singleton unknown function unknown function -1 40820 41662
AKJ73556.1 KR296694_p115 transposase singleton unknown function unknown function 1 57972 58088
AKJ73500.1 KR296694_p59 hypothetical protein singleton unknown function unknown function 1 33404 33520
AKJ73503.1 KR296694_p62 methylase phrog_757 DNA methyltransferase other -1 35555 36247
AKJ73541.1 KR296694_p100 hypothetical protein phrog_12401 unknown function unknown function -1 49503 49799
AKJ73525.1 KR296694_p84 hypothetical protein singleton unknown function unknown function -1 44683 45180
AKJ73447.1 KR296694_p6 hypothetical protein singleton unknown function unknown function 1 3023 3307
AKJ73544.1 KR296694_p103 hypothetical protein phrog_17917 unknown function unknown function -1 51059 51241
AKJ73539.1 KR296694_p98 hypothetical protein phrog_3474 unknown function unknown function -1 48908 49105
AKJ73563.1 KR296694_p122 hypothetical protein singleton unknown function unknown function 1 59734 59862
AKJ73571.1 KR296694_p130 minor tail protein singleton unknown function unknown function -1 62911 63156
AKJ73561.1 KR296694_p120 hypothetical protein phrog_1247 MazG-like pyrophosphatase other 1 59311 59682
AKJ73494.1 KR296694_p53 hypothetical protein phrog_9531 unknown function unknown function -1 29536 29742
AKJ73560.1 KR296694_p119 hypothetical protein singleton unknown function unknown function 1 59093 59314
AKJ73445.1 KR296694_p4 tail tape measure protein phrog_36805 tail length tape measure protein tail 1 1340 2230
AKJ73457.1 KR296694_p16 hypothetical protein singleton unknown function unknown function 1 6997 7332
AKJ73488.1 KR296694_p47 hypothetical protein phrog_1273 unknown function unknown function -1 26816 27070
AKJ73506.1 KR296694_p65 hypothetical protein phrog_5585 unknown function unknown function -1 36818 37207
AKJ73509.1 KR296694_p68 hypothetical protein singleton unknown function unknown function -1 37774 37902
AKJ73546.1 KR296694_p105 hypothetical protein singleton unknown function unknown function -1 51677 51865
AKJ73467.1 KR296694_p26 side tail fiber assembly protein phrog_105 tail fiber assembly tail 1 16574 16897
AKJ73520.1 KR296694_p79 l-gluamine-d-fructose-6-phosphate aminotransferase singleton unknown function unknown function 1 43439 43576
AKJ73543.1 KR296694_p102 hypothetical protein singleton unknown function unknown function -1 50387 50980
AKJ73497.1 KR296694_p56 DNA polymerase phrog_3261 unknown function unknown function -1 30377 30583
AKJ73569.1 KR296694_p128 pyrophosphatase singleton unknown function unknown function -1 62279 62458
AKJ73512.1 KR296694_p71 hypothetical protein singleton unknown function unknown function -1 38730 39545
AKJ73537.1 KR296694_p96 hypothetical protein phrog_12924 unknown function unknown function -1 48292 48585
AKJ73510.1 KR296694_p69 hypothetical protein singleton unknown function unknown function -1 37899 38231
AKJ73459.1 KR296694_p18 structural protein singleton unknown function unknown function 1 8017 9054
AKJ73502.1 KR296694_p61 primase singleton unknown function unknown function -1 34588 35391
AKJ73524.1 KR296694_p83 RNA ligase 2 singleton unknown function unknown function -1 44316 44657
AKJ73470.1 KR296694_p29 tail fiber protein phrog_4549 tail fiber protein tail 1 17973 19781
AKJ73552.1 KR296694_p111 lysin phrog_10489 tail protein tail 1 55488 55658
AKJ73567.1 KR296694_p126 cytosine-specific DNA methyltransferase singleton unknown function unknown function 1 60887 61378
AKJ73485.1 KR296694_p44 nicotinamide mononucleotide transporter PnuC phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover -1 25639 26358
AKJ73483.1 KR296694_p42 hypothetical protein singleton unknown function unknown function -1 25068 25316
AKJ73517.1 KR296694_p76 hypothetical protein singleton unknown function unknown function -1 42202 42810
AKJ73511.1 KR296694_p70 hypothetical protein singleton unknown function unknown function -1 38243 38668
AKJ73484.1 KR296694_p43 hypothetical protein singleton unknown function unknown function -1 25321 25440
AKJ73461.1 KR296694_p20 colanic acid biosynthesis protein singleton unknown function unknown function 1 10925 12058
AKJ73487.1 KR296694_p46 dynein-related subfamily protein singleton unknown function unknown function -1 26577 26819
AKJ73471.1 KR296694_p30 hypothetical protein phrog_4219 regulator of chromosome condensation DNA, RNA and nucleotide metabolism 1 19946 20500
AKJ73496.1 KR296694_p55 DNA stabilization protein phrog_6273 unknown function unknown function -1 30001 30375
AKJ73453.1 KR296694_p12 hypothetical protein singleton unknown function unknown function 1 5077 5838
AKJ73557.1 KR296694_p116 hypothetical protein singleton unknown function unknown function 1 58253 58480
AKJ73533.1 KR296694_p92 hypothetical protein phrog_14198 exonuclease DNA, RNA and nucleotide metabolism -1 47571 47747
AKJ73449.1 KR296694_p8 hypothetical protein singleton unknown function unknown function 1 3795 3983
AKJ73448.1 KR296694_p7 dextranase singleton unknown function unknown function 1 3358 3714
AKJ73446.1 KR296694_p5 tail tape measure protein singleton unknown function unknown function 1 2238 3062
AKJ73526.1 KR296694_p85 hypothetical protein singleton unknown function unknown function -1 45155 45355
AKJ73490.1 KR296694_p49 hypothetical protein phrog_16964 unknown function unknown function -1 27567 28145
AKJ73477.1 KR296694_p36 terminase large subunit singleton unknown function unknown function -1 22878 23237
AKJ73521.1 KR296694_p80 ADP-ribosyltransferase phrog_3163 unknown function unknown function -1 43605 43958
AKJ73564.1 KR296694_p123 carbohydrate binding domain protein phrog_4919 unknown function unknown function 1 59859 60248
AKJ73566.1 KR296694_p125 hypothetical protein phrog_11776 unknown function unknown function 1 60618 60767
AKJ73508.1 KR296694_p67 hypothetical protein phrog_5932 unknown function unknown function -1 37605 37784
AKJ73529.1 KR296694_p88 hypothetical protein phrog_8277 unknown function unknown function -1 45911 46315
AKJ73548.1 KR296694_p107 hypothetical protein phrog_4308 unknown function unknown function -1 52350 52565
AKJ73513.1 KR296694_p72 hypothetical protein phrog_609 RIIB lysis inhibitor lysis -1 39607 40443
AKJ73444.1 KR296694_p3 RNA-DNA and DNA-DNA helicase, ATPase phrog_1479 unknown function unknown function 1 829 1068
AKJ73519.1 KR296694_p78 hypothetical protein phrog_938 endolysin lysis -1 43000 43437
AKJ73486.1 KR296694_p45 hypothetical protein phrog_13997 unknown function unknown function -1 26378 26608
AKJ73504.1 KR296694_p63 DNA ligase phrog_10384 DNA ligase DNA, RNA and nucleotide metabolism -1 36258 36539
AKJ73536.1 KR296694_p95 hypothetical protein phrog_14149 unknown function unknown function -1 48101 48298
AKJ73568.1 KR296694_p127 DNA polymerase singleton unknown function unknown function 1 61432 61668
AKJ73498.1 KR296694_p57 DNA polymerase phrog_8888 DNA polymerase DNA, RNA and nucleotide metabolism -1 30619 31506
AKJ73562.1 KR296694_p121 ribonucleotide reductase of class Ia (aerobic) alpha subunit singleton unknown function unknown function 1 59660 59782
AKJ73482.1 KR296694_p41 hypothetical protein phrog_1451 unknown function unknown function -1 24791 25009
AKJ73532.1 KR296694_p91 hypothetical protein phrog_335 phosphatase other -1 47074 47574
AKJ73535.1 KR296694_p94 baseplate wedge initiator phrog_11116 baseplate wedge subunit tail -1 47925 48101
AKJ73530.1 KR296694_p89 VirE domain protein singleton unknown function unknown function -1 46308 46874
AKJ73523.1 KR296694_p82 hypothetical protein phrog_9816 unknown function unknown function -1 44122 44316
AKJ73450.1 KR296694_p9 RloG singleton unknown function unknown function 1 4111 4476
AKJ73466.1 KR296694_p25 hypothetical protein phrog_4465 tail fiber protein tail 1 15279 16334
AKJ73480.1 KR296694_p39 portal protein singleton unknown function unknown function -1 24052 24249
AKJ73549.1 KR296694_p108 hypothetical protein phrog_990 metal-dependent phosphohydrolase other -1 52816 53334
AKJ73451.1 KR296694_p10 hypothetical protein singleton unknown function unknown function 1 4550 4666
AKJ73501.1 KR296694_p60 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 33530 34612
AKJ73473.1 KR296694_p32 structural protein singleton unknown function unknown function 1 20816 21613
AKJ73493.1 KR296694_p52 hypothetical protein singleton unknown function unknown function -1 29287 29502
AKJ73514.1 KR296694_p73 hypothetical protein singleton unknown function unknown function -1 40479 40823
AKJ73495.1 KR296694_p54 UDP-galactopyranose mutase phrog_18454 unknown function unknown function -1 29753 29947
AKJ73479.1 KR296694_p38 hypothetical protein singleton unknown function unknown function 1 23772 23888
AKJ73478.1 KR296694_p37 hypothetical protein phrog_7310 unknown function unknown function -1 23249 23605
AKJ73559.1 KR296694_p118 baseplate tail tube initiator singleton unknown function unknown function 1 58674 59045
AKJ73527.1 KR296694_p86 methyltransferase phrog_16099 methyltransferase other -1 45348 45701
AKJ73545.1 KR296694_p104 hypothetical protein phrog_6318 unknown function unknown function -1 51297 51677
AKJ73476.1 KR296694_p35 hypothetical protein singleton unknown function unknown function -1 22603 22899
AKJ73489.1 KR296694_p48 DNA repair protein phrog_464 unknown function unknown function -1 27067 27456
AKJ73531.1 KR296694_p90 pyrophosphatase singleton unknown function unknown function -1 46883 47071
AKJ73554.1 KR296694_p113 tail I protein phrog_6790 tail protein tail 1 57185 57535
AKJ73475.1 KR296694_p34 single-stranded DNA-binding protein singleton unknown function unknown function -1 22056 22445
AKJ73456.1 KR296694_p15 hypothetical protein phrog_28323 unknown function unknown function 1 6719 6949
AKJ73553.1 KR296694_p112 DNA repair ATPase phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 55709 57148
AKJ73522.1 KR296694_p81 integrase phrog_3261 unknown function unknown function -1 43959 44156
AKJ73462.1 KR296694_p21 colanic acid-degrading protein singleton unknown function unknown function 1 12045 12953
AKJ73455.1 KR296694_p14 hypothetical protein phrog_11 baseplate spike tail 1 6008 6709
AKJ73474.1 KR296694_p33 DNA polymerase III singleton unknown function unknown function 1 21690 21803
AKJ73516.1 KR296694_p75 hypothetical protein singleton unknown function unknown function -1 41679 42173
AKJ73463.1 KR296694_p22 hypothetical protein phrog_6 baseplate wedge subunit tail 1 13062 14555
AKJ73555.1 KR296694_p114 helix turn helix protein singleton unknown function unknown function 1 57639 57830
AKJ73540.1 KR296694_p99 botulinum neurotoxin type D, BoNT/D phrog_27513 unknown function unknown function -1 49093 49446
AKJ73460.1 KR296694_p19 structural protein singleton unknown function unknown function 1 9051 10805
AKJ73454.1 KR296694_p13 hypothetical protein singleton unknown function unknown function 1 5832 6008
AKJ73465.1 KR296694_p24 structural protein singleton unknown function unknown function 1 15033 15197
AKJ73570.1 KR296694_p129 tail assembly chaperone singleton unknown function unknown function -1 62458 62760
AKJ73558.1 KR296694_p117 hypothetical protein phrog_28753 unknown function unknown function 1 58477 58662
AKJ73518.1 KR296694_p77 hypothetical protein phrog_24442 unknown function unknown function -1 42822 42995
AKJ73469.1 KR296694_p28 capsid and scaffold protein singleton unknown function unknown function 1 17694 17891
AKJ73458.1 KR296694_p17 tail fiber protein phrog_7760 tail fiber protein tail 1 7343 8017