| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KR296694 |
Definition |
Salmonella phage 40, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Vequintavirinae; unclassified Vequintavirinae. |
DB of origin |
PVOG |
Length |
63263 |
Host Name |
Salmonella |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
130 |
%GC |
44.93 |
Number of singletons |
66 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AKJ73464.1 | KR296694_p23 | hypothetical protein | phrog_4056 | baseplate protein | tail | 1 | 14566 | 15048 |
| AKJ73491.1 | KR296694_p50 | aminotransferase class-V | singleton | unknown function | unknown function | -1 | 28147 | 28278 |
| AKJ73542.1 | KR296694_p101 | lysin | singleton | unknown function | unknown function | -1 | 49865 | 50197 |
| AKJ73565.1 | KR296694_p124 | hypothetical protein | phrog_7983 | unknown function | unknown function | 1 | 60208 | 60618 |
| AKJ73443.1 | KR296694_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 604 | 756 |
| AKJ73452.1 | KR296694_p11 | DNA polymerase | singleton | unknown function | unknown function | 1 | 4782 | 5018 |
| AKJ73550.1 | KR296694_p109 | thymidine kinase | phrog_10920 | thymidylate kinase | other | -1 | 53298 | 54332 |
| AKJ73538.1 | KR296694_p97 | hypothetical protein | phrog_2381 | unknown function | unknown function | -1 | 48582 | 48734 |
| AKJ73492.1 | KR296694_p51 | hypothetical protein | phrog_3462 | nicotinamide-nucleotide adenylyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 28233 | 29219 |
| AKJ73481.1 | KR296694_p40 | permease protein | phrog_16320 | unknown function | unknown function | -1 | 24511 | 24798 |
| AKJ73507.1 | KR296694_p66 | DNA ligase | phrog_10936 | DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 37301 | 37624 |
| AKJ73505.1 | KR296694_p64 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36690 | 36821 |
| AKJ73551.1 | KR296694_p110 | postulated decoy protein | phrog_3118 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 54458 | 55315 |
| AKJ73472.1 | KR296694_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20565 | 20810 |
| AKJ73499.1 | KR296694_p58 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 31481 | 33307 |
| AKJ73547.1 | KR296694_p106 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51956 | 52348 |
| AKJ73534.1 | KR296694_p93 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47749 | 47928 |
| AKJ73442.1 | KR296694_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 353 | 517 |
| AKJ73528.1 | KR296694_p87 | hypothetical protein | phrog_8277 | unknown function | unknown function | -1 | 45688 | 45918 |
| AKJ73468.1 | KR296694_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17048 | 17209 |
| AKJ73515.1 | KR296694_p74 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40820 | 41662 |
| AKJ73556.1 | KR296694_p115 | transposase | singleton | unknown function | unknown function | 1 | 57972 | 58088 |
| AKJ73500.1 | KR296694_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33404 | 33520 |
| AKJ73503.1 | KR296694_p62 | methylase | phrog_757 | DNA methyltransferase | other | -1 | 35555 | 36247 |
| AKJ73541.1 | KR296694_p100 | hypothetical protein | phrog_12401 | unknown function | unknown function | -1 | 49503 | 49799 |
| AKJ73525.1 | KR296694_p84 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44683 | 45180 |
| AKJ73447.1 | KR296694_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3023 | 3307 |
| AKJ73544.1 | KR296694_p103 | hypothetical protein | phrog_17917 | unknown function | unknown function | -1 | 51059 | 51241 |
| AKJ73539.1 | KR296694_p98 | hypothetical protein | phrog_3474 | unknown function | unknown function | -1 | 48908 | 49105 |
| AKJ73563.1 | KR296694_p122 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59734 | 59862 |
| AKJ73571.1 | KR296694_p130 | minor tail protein | singleton | unknown function | unknown function | -1 | 62911 | 63156 |
| AKJ73561.1 | KR296694_p120 | hypothetical protein | phrog_1247 | MazG-like pyrophosphatase | other | 1 | 59311 | 59682 |
| AKJ73494.1 | KR296694_p53 | hypothetical protein | phrog_9531 | unknown function | unknown function | -1 | 29536 | 29742 |
| AKJ73560.1 | KR296694_p119 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59093 | 59314 |
| AKJ73445.1 | KR296694_p4 | tail tape measure protein | phrog_36805 | tail length tape measure protein | tail | 1 | 1340 | 2230 |
| AKJ73457.1 | KR296694_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6997 | 7332 |
| AKJ73488.1 | KR296694_p47 | hypothetical protein | phrog_1273 | unknown function | unknown function | -1 | 26816 | 27070 |
| AKJ73506.1 | KR296694_p65 | hypothetical protein | phrog_5585 | unknown function | unknown function | -1 | 36818 | 37207 |
| AKJ73509.1 | KR296694_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37774 | 37902 |
| AKJ73546.1 | KR296694_p105 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51677 | 51865 |
| AKJ73467.1 | KR296694_p26 | side tail fiber assembly protein | phrog_105 | tail fiber assembly | tail | 1 | 16574 | 16897 |
| AKJ73520.1 | KR296694_p79 | l-gluamine-d-fructose-6-phosphate aminotransferase | singleton | unknown function | unknown function | 1 | 43439 | 43576 |
| AKJ73543.1 | KR296694_p102 | hypothetical protein | singleton | unknown function | unknown function | -1 | 50387 | 50980 |
| AKJ73497.1 | KR296694_p56 | DNA polymerase | phrog_3261 | unknown function | unknown function | -1 | 30377 | 30583 |
| AKJ73569.1 | KR296694_p128 | pyrophosphatase | singleton | unknown function | unknown function | -1 | 62279 | 62458 |
| AKJ73512.1 | KR296694_p71 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38730 | 39545 |
| AKJ73537.1 | KR296694_p96 | hypothetical protein | phrog_12924 | unknown function | unknown function | -1 | 48292 | 48585 |
| AKJ73510.1 | KR296694_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37899 | 38231 |
| AKJ73459.1 | KR296694_p18 | structural protein | singleton | unknown function | unknown function | 1 | 8017 | 9054 |
| AKJ73502.1 | KR296694_p61 | primase | singleton | unknown function | unknown function | -1 | 34588 | 35391 |
| AKJ73524.1 | KR296694_p83 | RNA ligase 2 | singleton | unknown function | unknown function | -1 | 44316 | 44657 |
| AKJ73470.1 | KR296694_p29 | tail fiber protein | phrog_4549 | tail fiber protein | tail | 1 | 17973 | 19781 |
| AKJ73552.1 | KR296694_p111 | lysin | phrog_10489 | tail protein | tail | 1 | 55488 | 55658 |
| AKJ73567.1 | KR296694_p126 | cytosine-specific DNA methyltransferase | singleton | unknown function | unknown function | 1 | 60887 | 61378 |
| AKJ73485.1 | KR296694_p44 | nicotinamide mononucleotide transporter PnuC | phrog_1880 | PnuC-like nicotinamide mononucleotide transport | moron, auxiliary metabolic gene and host takeover | -1 | 25639 | 26358 |
| AKJ73483.1 | KR296694_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25068 | 25316 |
| AKJ73517.1 | KR296694_p76 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42202 | 42810 |
| AKJ73511.1 | KR296694_p70 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38243 | 38668 |
| AKJ73484.1 | KR296694_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25321 | 25440 |
| AKJ73461.1 | KR296694_p20 | colanic acid biosynthesis protein | singleton | unknown function | unknown function | 1 | 10925 | 12058 |
| AKJ73487.1 | KR296694_p46 | dynein-related subfamily protein | singleton | unknown function | unknown function | -1 | 26577 | 26819 |
| AKJ73471.1 | KR296694_p30 | hypothetical protein | phrog_4219 | regulator of chromosome condensation | DNA, RNA and nucleotide metabolism | 1 | 19946 | 20500 |
| AKJ73496.1 | KR296694_p55 | DNA stabilization protein | phrog_6273 | unknown function | unknown function | -1 | 30001 | 30375 |
| AKJ73453.1 | KR296694_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5077 | 5838 |
| AKJ73557.1 | KR296694_p116 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58253 | 58480 |
| AKJ73533.1 | KR296694_p92 | hypothetical protein | phrog_14198 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 47571 | 47747 |
| AKJ73449.1 | KR296694_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3795 | 3983 |
| AKJ73448.1 | KR296694_p7 | dextranase | singleton | unknown function | unknown function | 1 | 3358 | 3714 |
| AKJ73446.1 | KR296694_p5 | tail tape measure protein | singleton | unknown function | unknown function | 1 | 2238 | 3062 |
| AKJ73526.1 | KR296694_p85 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45155 | 45355 |
| AKJ73490.1 | KR296694_p49 | hypothetical protein | phrog_16964 | unknown function | unknown function | -1 | 27567 | 28145 |
| AKJ73477.1 | KR296694_p36 | terminase large subunit | singleton | unknown function | unknown function | -1 | 22878 | 23237 |
| AKJ73521.1 | KR296694_p80 | ADP-ribosyltransferase | phrog_3163 | unknown function | unknown function | -1 | 43605 | 43958 |
| AKJ73564.1 | KR296694_p123 | carbohydrate binding domain protein | phrog_4919 | unknown function | unknown function | 1 | 59859 | 60248 |
| AKJ73566.1 | KR296694_p125 | hypothetical protein | phrog_11776 | unknown function | unknown function | 1 | 60618 | 60767 |
| AKJ73508.1 | KR296694_p67 | hypothetical protein | phrog_5932 | unknown function | unknown function | -1 | 37605 | 37784 |
| AKJ73529.1 | KR296694_p88 | hypothetical protein | phrog_8277 | unknown function | unknown function | -1 | 45911 | 46315 |
| AKJ73548.1 | KR296694_p107 | hypothetical protein | phrog_4308 | unknown function | unknown function | -1 | 52350 | 52565 |
| AKJ73513.1 | KR296694_p72 | hypothetical protein | phrog_609 | RIIB lysis inhibitor | lysis | -1 | 39607 | 40443 |
| AKJ73444.1 | KR296694_p3 | RNA-DNA and DNA-DNA helicase, ATPase | phrog_1479 | unknown function | unknown function | 1 | 829 | 1068 |
| AKJ73519.1 | KR296694_p78 | hypothetical protein | phrog_938 | endolysin | lysis | -1 | 43000 | 43437 |
| AKJ73486.1 | KR296694_p45 | hypothetical protein | phrog_13997 | unknown function | unknown function | -1 | 26378 | 26608 |
| AKJ73504.1 | KR296694_p63 | DNA ligase | phrog_10384 | DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 36258 | 36539 |
| AKJ73536.1 | KR296694_p95 | hypothetical protein | phrog_14149 | unknown function | unknown function | -1 | 48101 | 48298 |
| AKJ73568.1 | KR296694_p127 | DNA polymerase | singleton | unknown function | unknown function | 1 | 61432 | 61668 |
| AKJ73498.1 | KR296694_p57 | DNA polymerase | phrog_8888 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 30619 | 31506 |
| AKJ73562.1 | KR296694_p121 | ribonucleotide reductase of class Ia (aerobic) alpha subunit | singleton | unknown function | unknown function | 1 | 59660 | 59782 |
| AKJ73482.1 | KR296694_p41 | hypothetical protein | phrog_1451 | unknown function | unknown function | -1 | 24791 | 25009 |
| AKJ73532.1 | KR296694_p91 | hypothetical protein | phrog_335 | phosphatase | other | -1 | 47074 | 47574 |
| AKJ73535.1 | KR296694_p94 | baseplate wedge initiator | phrog_11116 | baseplate wedge subunit | tail | -1 | 47925 | 48101 |
| AKJ73530.1 | KR296694_p89 | VirE domain protein | singleton | unknown function | unknown function | -1 | 46308 | 46874 |
| AKJ73523.1 | KR296694_p82 | hypothetical protein | phrog_9816 | unknown function | unknown function | -1 | 44122 | 44316 |
| AKJ73450.1 | KR296694_p9 | RloG | singleton | unknown function | unknown function | 1 | 4111 | 4476 |
| AKJ73466.1 | KR296694_p25 | hypothetical protein | phrog_4465 | tail fiber protein | tail | 1 | 15279 | 16334 |
| AKJ73480.1 | KR296694_p39 | portal protein | singleton | unknown function | unknown function | -1 | 24052 | 24249 |
| AKJ73549.1 | KR296694_p108 | hypothetical protein | phrog_990 | metal-dependent phosphohydrolase | other | -1 | 52816 | 53334 |
| AKJ73451.1 | KR296694_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4550 | 4666 |
| AKJ73501.1 | KR296694_p60 | helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 33530 | 34612 |
| AKJ73473.1 | KR296694_p32 | structural protein | singleton | unknown function | unknown function | 1 | 20816 | 21613 |
| AKJ73493.1 | KR296694_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29287 | 29502 |
| AKJ73514.1 | KR296694_p73 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40479 | 40823 |
| AKJ73495.1 | KR296694_p54 | UDP-galactopyranose mutase | phrog_18454 | unknown function | unknown function | -1 | 29753 | 29947 |
| AKJ73479.1 | KR296694_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23772 | 23888 |
| AKJ73478.1 | KR296694_p37 | hypothetical protein | phrog_7310 | unknown function | unknown function | -1 | 23249 | 23605 |
| AKJ73559.1 | KR296694_p118 | baseplate tail tube initiator | singleton | unknown function | unknown function | 1 | 58674 | 59045 |
| AKJ73527.1 | KR296694_p86 | methyltransferase | phrog_16099 | methyltransferase | other | -1 | 45348 | 45701 |
| AKJ73545.1 | KR296694_p104 | hypothetical protein | phrog_6318 | unknown function | unknown function | -1 | 51297 | 51677 |
| AKJ73476.1 | KR296694_p35 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22603 | 22899 |
| AKJ73489.1 | KR296694_p48 | DNA repair protein | phrog_464 | unknown function | unknown function | -1 | 27067 | 27456 |
| AKJ73531.1 | KR296694_p90 | pyrophosphatase | singleton | unknown function | unknown function | -1 | 46883 | 47071 |
| AKJ73554.1 | KR296694_p113 | tail I protein | phrog_6790 | tail protein | tail | 1 | 57185 | 57535 |
| AKJ73475.1 | KR296694_p34 | single-stranded DNA-binding protein | singleton | unknown function | unknown function | -1 | 22056 | 22445 |
| AKJ73456.1 | KR296694_p15 | hypothetical protein | phrog_28323 | unknown function | unknown function | 1 | 6719 | 6949 |
| AKJ73553.1 | KR296694_p112 | DNA repair ATPase | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55709 | 57148 |
| AKJ73522.1 | KR296694_p81 | integrase | phrog_3261 | unknown function | unknown function | -1 | 43959 | 44156 |
| AKJ73462.1 | KR296694_p21 | colanic acid-degrading protein | singleton | unknown function | unknown function | 1 | 12045 | 12953 |
| AKJ73455.1 | KR296694_p14 | hypothetical protein | phrog_11 | baseplate spike | tail | 1 | 6008 | 6709 |
| AKJ73474.1 | KR296694_p33 | DNA polymerase III | singleton | unknown function | unknown function | 1 | 21690 | 21803 |
| AKJ73516.1 | KR296694_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41679 | 42173 |
| AKJ73463.1 | KR296694_p22 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | 1 | 13062 | 14555 |
| AKJ73555.1 | KR296694_p114 | helix turn helix protein | singleton | unknown function | unknown function | 1 | 57639 | 57830 |
| AKJ73540.1 | KR296694_p99 | botulinum neurotoxin type D, BoNT/D | phrog_27513 | unknown function | unknown function | -1 | 49093 | 49446 |
| AKJ73460.1 | KR296694_p19 | structural protein | singleton | unknown function | unknown function | 1 | 9051 | 10805 |
| AKJ73454.1 | KR296694_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5832 | 6008 |
| AKJ73465.1 | KR296694_p24 | structural protein | singleton | unknown function | unknown function | 1 | 15033 | 15197 |
| AKJ73570.1 | KR296694_p129 | tail assembly chaperone | singleton | unknown function | unknown function | -1 | 62458 | 62760 |
| AKJ73558.1 | KR296694_p117 | hypothetical protein | phrog_28753 | unknown function | unknown function | 1 | 58477 | 58662 |
| AKJ73518.1 | KR296694_p77 | hypothetical protein | phrog_24442 | unknown function | unknown function | -1 | 42822 | 42995 |
| AKJ73469.1 | KR296694_p28 | capsid and scaffold protein | singleton | unknown function | unknown function | 1 | 17694 | 17891 |
| AKJ73458.1 | KR296694_p17 | tail fiber protein | phrog_7760 | tail fiber protein | tail | 1 | 7343 | 8017 |