Genomic map of Staphylococcus phage 55-3 (KR709303)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KR709303
Definition
Staphylococcus phage 55-3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus; Staphylococcus virus 55.
DB of origin
PVOG
Length
42309
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
35.64
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKO62089.1 KR709303_p52 minor structural protein phrog_287 minor tail protein tail 1 30080 31978
AKO62088.1 KR709303_p51 minor structural protein phrog_663 minor head protein head and packaging 1 28184 30067
AKO62094.1 KR709303_p57 lysin phrog_759 tail associated cell-wall hydrolase other 1 34831 36705
AKO62049.1 KR709303_p9 hypothetical protein phrog_1263 unknown function unknown function 1 4705 4848
AKO62043.1 KR709303_p3 hypothetical protein phrog_87 metallo-protease other -1 1703 2164
AKO62100.1 KR709303_p63 hypothetical protein phrog_1529 unknown function unknown function 1 40838 41038
AKO62069.1 KR709303_p32 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 14236 14442
AKO62098.1 KR709303_p61 lysin phrog_635 endolysin lysis 1 38830 40275
AKO62061.1 KR709303_p24 hypothetical protein phrog_299 unknown function unknown function 1 11694 11879
AKO62086.1 KR709303_p49 tape-measure protein phrog_58 tail length tape measure protein tail 1 24254 27223
AKO62093.1 KR709303_p56 hypothetical protein phrog_276 unknown function unknown function 1 34395 34694
AKO62038.1 KR709303_p10 hypothetical protein phrog_7948 unknown function unknown function -1 4858 5511
AKO62063.1 KR709303_p26 hypothetical protein phrog_258 virulence associated other 1 12252 12494
AKO62070.1 KR709303_p33 transcriptional activator RinB phrog_152 RinB-like transcriptional activator transcription regulation 1 14439 14612
AKO62071.1 KR709303_p34 late transcriptional regulator LtrC phrog_1058 unknown function unknown function 1 14613 15014
AKO62084.1 KR709303_p47 hypothetical protein phrog_183 tail chaperone protein tail 1 23395 23889
AKO62066.1 KR709303_p29 hypothetical protein phrog_266 unknown function unknown function 1 13180 13428
AKO62044.1 KR709303_p4 Cro/CI family transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 2186 2515
AKO62045.1 KR709303_p5 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 2692 2940
AKO62087.1 KR709303_p50 hypothetical protein phrog_33 distal tail protein Dit tail 1 27238 28173
AKO62077.1 KR709303_p40 major capsid protein phrog_544 major head protein head and packaging 1 20127 20951
AKO62091.1 KR709303_p54 hypothetical protein phrog_300 tail fiber protein tail 1 33801 34178
AKO62056.1 KR709303_p19 replication initiation protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 9327 10097
AKO62078.1 KR709303_p41 transcriptional terminator phrog_390 Arc-like repressor transcription regulation 1 20968 21294
AKO62082.1 KR709303_p45 hypothetical protein phrog_176 tail terminator connector 1 22349 22786
AKO62052.1 KR709303_p15 single stranded DNA-binding protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 7606 8157
AKO62073.1 KR709303_p36 terminase large subunit phrog_2 terminase large subunit head and packaging 1 15853 17061
AKO62085.1 KR709303_p48 hypothetical protein phrog_1404 tail protein tail 1 23910 24251
AKO62074.1 KR709303_p37 portal protein phrog_64 portal protein head and packaging 1 17075 18493
AKO62090.1 KR709303_p53 tail fiber protein phrog_257 minor tail protein tail 1 31978 33801
AKO62099.1 KR709303_p62 hypothetical protein phrog_4761 unknown function unknown function 1 40542 40670
AKO62048.1 KR709303_p8 antirepressor protein phrog_63 anti-repressor Ant transcription regulation 1 3934 4689
AKO62083.1 KR709303_p46 hypothetical protein phrog_238 major tail protein tail 1 22773 23333
AKO62040.1 KR709303_p12 hypothetical protein phrog_401 unknown function unknown function 1 6049 6309
AKO62072.1 KR709303_p35 terminase small subunit phrog_1595 terminase small subunit head and packaging 1 15366 15860
AKO62080.1 KR709303_p43 head-tail adaptor phrog_25 head closure Hc1 connector 1 21601 21936
AKO62054.1 KR709303_p17 hypothetical protein phrog_1902 unknown function unknown function 1 8838 8987
AKO62097.1 KR709303_p60 holin phrog_962 holin lysis 1 38412 38849
AKO62064.1 KR709303_p27 hypothetical protein phrog_467 unknown function unknown function 1 12508 12912
AKO62042.1 KR709303_p2 hypothetical protein phrog_4037 unknown function unknown function -1 1186 1686
AKO62053.1 KR709303_p16 hypothetical protein phrog_398 unknown function unknown function 1 8170 8841
AKO62065.1 KR709303_p28 hypothetical protein phrog_1034 unknown function unknown function 1 12912 13187
AKO62076.1 KR709303_p39 minor structural protein phrog_194 head scaffolding protein head and packaging 1 19510 20106
AKO62057.1 KR709303_p20 DNA replication protein DnaC phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 10107 10886
AKO62095.1 KR709303_p58 tail fiber protein phrog_1125 tail fiber protein tail 1 36718 37956
AKO62060.1 KR709303_p23 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 11285 11689
AKO62039.1 KR709303_p11 hypothetical protein phrog_989 unknown function unknown function 1 5582 5803
AKO62081.1 KR709303_p44 tail protein phrog_5 tail completion or Neck1 protein connector 1 21923 22336
AKO62055.1 KR709303_p18 hypothetical protein phrog_1090 unknown function unknown function -1 8980 9261
AKO62051.1 KR709303_p14 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6803 7576
AKO62102.1 KR709303_p65 hypothetical protein phrog_7090 unknown function unknown function 1 41682 42065
AKO62062.1 KR709303_p25 hypothetical protein phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 11880 12248
AKO62101.1 KR709303_p64 hypothetical protein phrog_7919 unknown function unknown function 1 41384 41695
AKO62059.1 KR709303_p22 hypothetical protein phrog_433 unknown function unknown function 1 11054 11275
AKO62079.1 KR709303_p42 head-tail connector protein phrog_1161 head-tail adaptor connector 1 21294 21608
AKO62041.1 KR709303_p1 integrase phrog_1 integrase integration and excision -1 72 1121
AKO62067.1 KR709303_p30 dimeric dUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 13421 13957
AKO62075.1 KR709303_p38 minor capsid protein phrog_115 minor head protein head and packaging 1 18450 19412
AKO62050.1 KR709303_p13 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 6324 6803
AKO62046.1 KR709303_p6 hypothetical protein phrog_847 anti-repressor Ant transcription regulation 1 2953 3396
AKO62058.1 KR709303_p21 hypothetical protein phrog_809 transcriptional regulator transcription regulation 1 10880 11041
AKO62047.1 KR709303_p7 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 3747 3932
AKO62068.1 KR709303_p31 hypothetical protein phrog_2027 unknown function unknown function 1 13994 14239
AKO62096.1 KR709303_p59 hypothetical protein phrog_1262 unknown function unknown function 1 37961 38356
AKO62092.1 KR709303_p55 hypothetical protein phrog_134 unknown function unknown function 1 34182 34355