| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KR997931 |
Definition |
Mycobacterium phage Girafales, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
PVOG |
Length |
58456 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
112 |
%GC |
61.68 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AKU45141.1 | KR997931_p54 | immunity repressor | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 34908 | 35441 |
| AKU45171.1 | KR997931_p84 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 48965 | 49816 |
| AKU45194.1 | KR997931_p107 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 55293 | 55697 |
| AKU45161.1 | KR997931_p74 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 44124 | 44309 |
| AKU45152.1 | KR997931_p65 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 40661 | 40942 |
| AKU45147.1 | KR997931_p60 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 38964 | 39248 |
| AKU45162.1 | KR997931_p75 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 44302 | 44442 |
| AKU45100.1 | KR997931_p14 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8403 | 8954 |
| AKU45134.1 | KR997931_p47 | HTH DNA-binding domain protein | phrog_5497 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 31819 | 32016 |
| AKU45123.1 | KR997931_p36 | DnaQ-like protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29191 | 30012 |
| AKU45127.1 | KR997931_p40 | hypothetical protein | phrog_7977 | unknown function | unknown function | -1 | 30760 | 31014 |
| AKU45091.1 | KR997931_p4 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2197 | 3618 |
| AKU45137.1 | KR997931_p50 | hypothetical protein | phrog_10321 | unknown function | unknown function | -1 | 32442 | 32570 |
| AKU45106.1 | KR997931_p19 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17227 | 19764 |
| AKU45131.1 | KR997931_p44 | hypothetical protein | phrog_32925 | unknown function | unknown function | -1 | 31487 | 31573 |
| AKU45148.1 | KR997931_p61 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 39245 | 39433 |
| AKU45142.1 | KR997931_p55 | HTH DNA-binding domain protein | phrog_6267 | transcriptional repressor | transcription regulation | 1 | 35606 | 35899 |
| AKU45167.1 | KR997931_p80 | hypothetical protein | phrog_8611 | unknown function | unknown function | -1 | 47034 | 47351 |
| AKU45118.1 | KR997931_p31 | lysin A | phrog_700 | endolysin | lysis | 1 | 26135 | 27328 |
| AKU45121.1 | KR997931_p34 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28573 | 28947 |
| AKU45183.1 | KR997931_p96 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 52262 | 52399 |
| AKU45153.1 | KR997931_p66 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 40939 | 41286 |
| AKU45184.1 | KR997931_p97 | hypothetical protein | phrog_5186 | unknown function | unknown function | 1 | 52396 | 52569 |
| AKU45114.1 | KR997931_p27 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25263 | 25547 |
| AKU45108.1 | KR997931_p21 | minor tail protein | phrog_2106 | minor tail protein | tail | 1 | 21644 | 22807 |
| AKU45146.1 | KR997931_p59 | ParB-like domain protein | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 38167 | 38964 |
| AKU45103.1 | KR997931_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 12846 | 14555 |
| AKU45182.1 | KR997931_p95 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 52068 | 52262 |
| AKU45198.1 | KR997931_p111 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 57562 | 57756 |
| AKU45096.1 | KR997931_p9 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6291 | 6620 |
| AKU45102.1 | KR997931_p15 | tapemeasure | phrog_1942 | tail length tape measure protein | tail | 1 | 9357 | 12845 |
| AKU45119.1 | KR997931_p32 | lysin B | phrog_102 | endolysin | lysis | 1 | 27328 | 28329 |
| AKU45120.1 | KR997931_p33 | holin | phrog_443 | holin | lysis | 1 | 28343 | 28576 |
| AKU45179.1 | KR997931_p92 | hypothetical protein | phrog_4152 | unknown function | unknown function | 1 | 51477 | 51605 |
| AKU45188.1 | KR997931_p101 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 53463 | 53714 |
| AKU45169.1 | KR997931_p82 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 47568 | 48830 |
| AKU45140.1 | KR997931_p53 | hypothetical protein | phrog_7613 | unknown function | unknown function | -1 | 34759 | 34905 |
| AKU45193.1 | KR997931_p106 | hypothetical protein | phrog_3813 | unknown function | unknown function | 1 | 55010 | 55267 |
| AKU45196.1 | KR997931_p109 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 55929 | 56090 |
| AKU45144.1 | KR997931_p57 | hypothetical protein | phrog_18246 | unknown function | unknown function | 1 | 36763 | 37284 |
| AKU45157.1 | KR997931_p70 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 42704 | 42934 |
| AKU45185.1 | KR997931_p98 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 52622 | 52912 |
| AKU45113.1 | KR997931_p26 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24917 | 25114 |
| AKU45159.1 | KR997931_p72 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 43190 | 43768 |
| AKU45170.1 | KR997931_p83 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 48827 | 48961 |
| AKU45111.1 | KR997931_p24 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 23452 | 24090 |
| AKU45164.1 | KR997931_p77 | DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 44782 | 46527 |
| AKU45107.1 | KR997931_p20 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19761 | 21647 |
| AKU45158.1 | KR997931_p71 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 42931 | 43176 |
| AKU45128.1 | KR997931_p41 | hypothetical protein | phrog_10332 | unknown function | unknown function | -1 | 31007 | 31201 |
| AKU45189.1 | KR997931_p102 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 53711 | 54355 |
| AKU45109.1 | KR997931_p22 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22821 | 23162 |
| AKU45090.1 | KR997931_p3 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 672 | 2159 |
| AKU45110.1 | KR997931_p23 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23185 | 23439 |
| AKU45149.1 | KR997931_p62 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 39430 | 39603 |
| AKU45122.1 | KR997931_p35 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 28971 | 29204 |
| AKU45097.1 | KR997931_p10 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6627 | 6953 |
| AKU45135.1 | KR997931_p48 | hypothetical protein | phrog_5254 | unknown function | unknown function | -1 | 32017 | 32259 |
| AKU45151.1 | KR997931_p64 | hypothetical protein | phrog_8015 | unknown function | unknown function | 1 | 40301 | 40582 |
| AKU45166.1 | KR997931_p79 | hypothetical protein | phrog_8485 | unknown function | unknown function | -1 | 46650 | 47027 |
| AKU45093.1 | KR997931_p6 | scaffolding protein | phrog_4638 | head scaffolding protein | head and packaging | 1 | 4403 | 4939 |
| AKU45105.1 | KR997931_p18 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16400 | 17230 |
| AKU45099.1 | KR997931_p12 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7458 | 8267 |
| AKU45145.1 | KR997931_p58 | hypothetical protein | phrog_15279 | unknown function | unknown function | 1 | 37281 | 38180 |
| AKU45094.1 | KR997931_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5002 | 5910 |
| AKU45176.1 | KR997931_p89 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 50668 | 51039 |
| AKU45172.1 | KR997931_p85 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 49813 | 50076 |
| AKU45115.1 | KR997931_p28 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25554 | 25700 |
| AKU45181.1 | KR997931_p94 | hypothetical protein | phrog_6540 | unknown function | unknown function | 1 | 51790 | 52086 |
| AKU45089.1 | KR997931_p2 | hypothetical protein | phrog_4479 | terminase small subunit | head and packaging | 1 | 446 | 700 |
| AKU45112.1 | KR997931_p25 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24087 | 24911 |
| AKU45178.1 | KR997931_p91 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 51196 | 51480 |
| AKU45168.1 | KR997931_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47348 | 47500 |
| AKU45095.1 | KR997931_p8 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 5923 | 6294 |
| AKU45150.1 | KR997931_p63 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 39600 | 40283 |
| AKU45132.1 | KR997931_p45 | hypothetical protein | phrog_12593 | unknown function | unknown function | -1 | 31548 | 31718 |
| AKU45154.1 | KR997931_p67 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 41286 | 41693 |
| AKU45126.1 | KR997931_p39 | hypothetical protein | phrog_26953 | unknown function | unknown function | -1 | 30654 | 30752 |
| AKU45117.1 | KR997931_p30 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 25905 | 26138 |
| AKU45163.1 | KR997931_p76 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 44516 | 44785 |
| AKU45101.1 | KR997931_p13 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8403 | 9339 |
| AKU45155.1 | KR997931_p68 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 41690 | 42190 |
| AKU45197.1 | KR997931_p110 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 56107 | 57543 |
| AKU45174.1 | KR997931_p87 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 50273 | 50467 |
| AKU45165.1 | KR997931_p78 | hypothetical protein | phrog_6506 | Arc-like repressor | transcription regulation | -1 | 46496 | 46657 |
| AKU45124.1 | KR997931_p37 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30028 | 30318 |
| AKU45191.1 | KR997931_p104 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54686 | 54796 |
| AKU45138.1 | KR997931_p51 | integrase | phrog_1 | integrase | integration and excision | 1 | 32828 | 34117 |
| AKU45092.1 | KR997931_p5 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 3602 | 4327 |
| AKU45199.1 | KR997931_p112 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 57753 | 58364 |
| AKU45133.1 | KR997931_p46 | hypothetical protein | phrog_14625 | unknown function | unknown function | -1 | 31715 | 31822 |
| AKU45088.1 | KR997931_p1 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41 | 373 |
| AKU45180.1 | KR997931_p93 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 51602 | 51793 |
| AKU45129.1 | KR997931_p42 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 31201 | 31320 |
| AKU45190.1 | KR997931_p103 | HTH DNA-binding domain protein | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 54465 | 54689 |
| AKU45104.1 | KR997931_p17 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14636 | 16345 |
| AKU45116.1 | KR997931_p29 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25697 | 25840 |
| AKU45125.1 | KR997931_p38 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30311 | 30403 |
| AKU45175.1 | KR997931_p88 | hypothetical protein | phrog_5892 | unknown function | unknown function | 1 | 50464 | 50622 |
| AKU45160.1 | KR997931_p73 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43765 | 44127 |
| AKU45192.1 | KR997931_p105 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 54858 | 55013 |
| AKU45195.1 | KR997931_p108 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 55694 | 55936 |
| AKU45186.1 | KR997931_p99 | hypothetical protein | phrog_10901 | unknown function | unknown function | 1 | 52952 | 53185 |
| AKU45177.1 | KR997931_p90 | hypothetical protein | phrog_7842 | unknown function | unknown function | 1 | 51026 | 51199 |
| AKU45136.1 | KR997931_p49 | hypothetical protein | phrog_25963 | unknown function | unknown function | -1 | 32273 | 32401 |
| AKU45156.1 | KR997931_p69 | HTH DNA-binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 42187 | 42552 |
| AKU45143.1 | KR997931_p56 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 35966 | 36760 |
| AKU45098.1 | KR997931_p11 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 6943 | 7347 |
| AKU45139.1 | KR997931_p52 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 34193 | 34645 |
| AKU45173.1 | KR997931_p86 | hypothetical protein | phrog_2730 | unknown function | unknown function | 1 | 50073 | 50276 |
| AKU45187.1 | KR997931_p100 | hypothetical protein | phrog_10123 | unknown function | unknown function | 1 | 53182 | 53460 |
| AKU45130.1 | KR997931_p43 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 31320 | 31487 |