Genomic map of Bacillus phage Silence (KT001912)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT001912
Definition
Bacillus phage Silence, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
40001
Host Name
Bacillus megaterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
66
%GC
38.28
Number of singletons
26
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKU43400.1 KT001912_p62 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 38124 38675
AKU43401.1 KT001912_p63 DNA-binding protein singleton unknown function unknown function 1 38691 39185
AKU43368.1 KT001912_p30 hypothetical protein singleton unknown function unknown function 1 23731 23955
AKU43403.1 KT001912_p65 hypothetical protein singleton unknown function unknown function 1 39679 39771
AKU43383.1 KT001912_p45 hypothetical protein singleton unknown function unknown function 1 30555 30746
AKU43370.1 KT001912_p32 hypothetical protein singleton unknown function unknown function 1 24237 24443
AKU43381.1 KT001912_p43 ssDNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 29740 30180
AKU43361.1 KT001912_p23 tailspike protein singleton unknown function unknown function 1 19342 20901
AKU43386.1 KT001912_p48 hypothetical protein singleton unknown function unknown function 1 32253 32393
ALG64512.1 KT001912_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 755 2811
AKU43399.1 KT001912_p61 dUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 37614 38099
AKU43380.1 KT001912_p42 ssDNA-annealing protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28985 29713
AKU43371.1 KT001912_p33 FtsK/SpoIIIE protein phrog_1358 FtsK/SpoIIIE-like protein moron, auxiliary metabolic gene and host takeover 1 24739 26040
AKU43387.1 KT001912_p49 DNA-binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 32693 32863
AKU43345.1 KT001912_p7 prohead protease phrog_80 head maturation protease head and packaging 1 6338 7024
AKU43382.1 KT001912_p44 transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 30203 30562
AKU43343.1 KT001912_p5 hypothetical protein singleton unknown function unknown function 1 4962 5996
AKU43374.1 KT001912_p36 hypothetical protein singleton unknown function unknown function 1 26697 27164
AKU43344.1 KT001912_p6 hypothetical protein singleton unknown function unknown function 1 6010 6204
AKU43379.1 KT001912_p41 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 28467 28988
AKU43350.1 KT001912_p12 tail-component protein phrog_5 tail completion or Neck1 protein connector 1 9270 9755
AKU43346.1 KT001912_p8 major capsid protein phrog_10 major head protein head and packaging 1 7037 8215
AKU43396.1 KT001912_p58 hypothetical protein singleton unknown function unknown function 1 37096 37224
AKU43393.1 KT001912_p55 hypothetical protein singleton unknown function unknown function 1 36201 36578
AKU43357.1 KT001912_p19 tail-associated endopeptidase phrog_326 tail protein with endopeptidase domain other 1 15342 17003
AKU43359.1 KT001912_p21 tailspike protein phrog_2234 tail spike protein tail 1 17362 18951
AKU43384.1 KT001912_p46 DNA polymerase III subunit beta phrog_6615 DNA polymerase DNA, RNA and nucleotide metabolism 1 30975 31667
AKU43385.1 KT001912_p47 hypothetical protein phrog_12313 unknown function unknown function 1 31715 32263
AKU43358.1 KT001912_p20 hypothetical protein singleton unknown function unknown function 1 17023 17337
AKU43347.1 KT001912_p9 hypothetical protein phrog_2250 unknown function unknown function 1 8289 8609
AKU43395.1 KT001912_p57 hypothetical protein singleton unknown function unknown function 1 36743 37099
AKU43392.1 KT001912_p54 hypothetical protein singleton unknown function unknown function 1 36061 36204
AKU43389.1 KT001912_p51 hypothetical protein phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism 1 33389 34393
AKU43391.1 KT001912_p53 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 34739 36064
AKU43349.1 KT001912_p11 head-tail adaptor protein phrog_25 head closure Hc1 connector 1 8931 9266
AKU43355.1 KT001912_p17 tape measure protein phrog_58 tail length tape measure protein tail 1 11474 14488
AKU43340.1 KT001912_p3 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1421 1909
AKU43352.1 KT001912_p14 major tail protein phrog_1407 major tail protein tail 1 10176 10595
AKU43402.1 KT001912_p64 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 39175 39675
AKU43353.1 KT001912_p15 tape measure chaperone singleton unknown function unknown function 1 10732 11474
AKU43356.1 KT001912_p18 tail component protein phrog_33 distal tail protein Dit tail 1 14479 15330
AKU43398.1 KT001912_p60 hypothetical protein phrog_23069 unknown function unknown function 1 37318 37623
AKU43404.1 KT001912_p66 hypothetical protein singleton unknown function unknown function 1 39768 40001
AKU43351.1 KT001912_p13 tail protein phrog_176 tail terminator connector 1 9752 10162
AKU43397.1 KT001912_p59 hypothetical protein singleton unknown function unknown function 1 37221 37331
AKU43372.1 KT001912_p34 plasmid replication-relaxation protein phrog_2190 replication initiation protein DNA, RNA and nucleotide metabolism 1 25997 26548
AKU43363.1 KT001912_p25 endolysin phrog_2742 endolysin lysis 1 21374 22201
AKU43377.1 KT001912_p39 hypothetical protein singleton unknown function unknown function 1 28143 28298
AKU43390.1 KT001912_p52 hypothetical protein phrog_2289 helicase loader DNA, RNA and nucleotide metabolism 1 34383 34742
AKU43362.1 KT001912_p24 hypothetical protein phrog_689 holin lysis 1 21033 21374
AKU43394.1 KT001912_p56 hypothetical protein singleton unknown function unknown function 1 36580 36768
AKU43342.1 KT001912_p4 portal protein phrog_2662 portal protein head and packaging 1 2839 4941
AKU43375.1 KT001912_p37 hypothetical protein phrog_28964 unknown function unknown function 1 27179 27544
AKU43366.1 KT001912_p28 hypothetical protein singleton unknown function unknown function 1 22732 22884
AKU43376.1 KT001912_p38 hypothetical protein phrog_26234 unknown function unknown function 1 27564 27914
AKU43365.1 KT001912_p27 DNA-binding protein singleton unknown function unknown function 1 22417 22713
AKU43378.1 KT001912_p40 hypothetical protein singleton unknown function unknown function 1 28315 28470
AKU43369.1 KT001912_p31 hypothetical protein singleton unknown function unknown function 1 23971 24162
AKU43364.1 KT001912_p26 holin phrog_263 holin lysis 1 22215 22451
AKU43360.1 KT001912_p22 hypothetical protein singleton unknown function unknown function 1 18967 19212
AKU43367.1 KT001912_p29 hypothetical protein phrog_21302 unknown function unknown function 1 23037 23717
AKU43373.1 KT001912_p35 hypothetical protein singleton unknown function unknown function 1 26561 26695
AKU43348.1 KT001912_p10 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 8611 8934
AKU43338.1 KT001912_p1 terminase small subunit phrog_309 terminase small subunit head and packaging 1 282 758
AKU43388.1 KT001912_p50 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 32864 33367
AKU43354.1 KT001912_p16 tape measure chaperone phrog_2115 tail protein tail 1 10732 11154