| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KT001912 |
Definition |
Bacillus phage Silence, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
PVOG |
Length |
40001 |
Host Name |
Bacillus megaterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
66 |
%GC |
38.28 |
Number of singletons |
26 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AKU43400.1 | KT001912_p62 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 38124 | 38675 |
| AKU43401.1 | KT001912_p63 | DNA-binding protein | singleton | unknown function | unknown function | 1 | 38691 | 39185 |
| AKU43368.1 | KT001912_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23731 | 23955 |
| AKU43403.1 | KT001912_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39679 | 39771 |
| AKU43383.1 | KT001912_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30555 | 30746 |
| AKU43370.1 | KT001912_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24237 | 24443 |
| AKU43381.1 | KT001912_p43 | ssDNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29740 | 30180 |
| AKU43361.1 | KT001912_p23 | tailspike protein | singleton | unknown function | unknown function | 1 | 19342 | 20901 |
| AKU43386.1 | KT001912_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32253 | 32393 |
| ALG64512.1 | KT001912_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 755 | 2811 |
| AKU43399.1 | KT001912_p61 | dUTPase | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 37614 | 38099 |
| AKU43380.1 | KT001912_p42 | ssDNA-annealing protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 28985 | 29713 |
| AKU43371.1 | KT001912_p33 | FtsK/SpoIIIE protein | phrog_1358 | FtsK/SpoIIIE-like protein | moron, auxiliary metabolic gene and host takeover | 1 | 24739 | 26040 |
| AKU43387.1 | KT001912_p49 | DNA-binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 32693 | 32863 |
| AKU43345.1 | KT001912_p7 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 6338 | 7024 |
| AKU43382.1 | KT001912_p44 | transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 30203 | 30562 |
| AKU43343.1 | KT001912_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4962 | 5996 |
| AKU43374.1 | KT001912_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26697 | 27164 |
| AKU43344.1 | KT001912_p6 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6010 | 6204 |
| AKU43379.1 | KT001912_p41 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 28467 | 28988 |
| AKU43350.1 | KT001912_p12 | tail-component protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 9270 | 9755 |
| AKU43346.1 | KT001912_p8 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7037 | 8215 |
| AKU43396.1 | KT001912_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37096 | 37224 |
| AKU43393.1 | KT001912_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36201 | 36578 |
| AKU43357.1 | KT001912_p19 | tail-associated endopeptidase | phrog_326 | tail protein with endopeptidase domain | other | 1 | 15342 | 17003 |
| AKU43359.1 | KT001912_p21 | tailspike protein | phrog_2234 | tail spike protein | tail | 1 | 17362 | 18951 |
| AKU43384.1 | KT001912_p46 | DNA polymerase III subunit beta | phrog_6615 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 30975 | 31667 |
| AKU43385.1 | KT001912_p47 | hypothetical protein | phrog_12313 | unknown function | unknown function | 1 | 31715 | 32263 |
| AKU43358.1 | KT001912_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17023 | 17337 |
| AKU43347.1 | KT001912_p9 | hypothetical protein | phrog_2250 | unknown function | unknown function | 1 | 8289 | 8609 |
| AKU43395.1 | KT001912_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36743 | 37099 |
| AKU43392.1 | KT001912_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36061 | 36204 |
| AKU43389.1 | KT001912_p51 | hypothetical protein | phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 33389 | 34393 |
| AKU43391.1 | KT001912_p53 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 34739 | 36064 |
| AKU43349.1 | KT001912_p11 | head-tail adaptor protein | phrog_25 | head closure Hc1 | connector | 1 | 8931 | 9266 |
| AKU43355.1 | KT001912_p17 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11474 | 14488 |
| AKU43340.1 | KT001912_p3 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1421 | 1909 |
| AKU43352.1 | KT001912_p14 | major tail protein | phrog_1407 | major tail protein | tail | 1 | 10176 | 10595 |
| AKU43402.1 | KT001912_p64 | holliday junction resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 39175 | 39675 |
| AKU43353.1 | KT001912_p15 | tape measure chaperone | singleton | unknown function | unknown function | 1 | 10732 | 11474 |
| AKU43356.1 | KT001912_p18 | tail component protein | phrog_33 | distal tail protein Dit | tail | 1 | 14479 | 15330 |
| AKU43398.1 | KT001912_p60 | hypothetical protein | phrog_23069 | unknown function | unknown function | 1 | 37318 | 37623 |
| AKU43404.1 | KT001912_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39768 | 40001 |
| AKU43351.1 | KT001912_p13 | tail protein | phrog_176 | tail terminator | connector | 1 | 9752 | 10162 |
| AKU43397.1 | KT001912_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37221 | 37331 |
| AKU43372.1 | KT001912_p34 | plasmid replication-relaxation protein | phrog_2190 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 25997 | 26548 |
| AKU43363.1 | KT001912_p25 | endolysin | phrog_2742 | endolysin | lysis | 1 | 21374 | 22201 |
| AKU43377.1 | KT001912_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28143 | 28298 |
| AKU43390.1 | KT001912_p52 | hypothetical protein | phrog_2289 | helicase loader | DNA, RNA and nucleotide metabolism | 1 | 34383 | 34742 |
| AKU43362.1 | KT001912_p24 | hypothetical protein | phrog_689 | holin | lysis | 1 | 21033 | 21374 |
| AKU43394.1 | KT001912_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36580 | 36768 |
| AKU43342.1 | KT001912_p4 | portal protein | phrog_2662 | portal protein | head and packaging | 1 | 2839 | 4941 |
| AKU43375.1 | KT001912_p37 | hypothetical protein | phrog_28964 | unknown function | unknown function | 1 | 27179 | 27544 |
| AKU43366.1 | KT001912_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22732 | 22884 |
| AKU43376.1 | KT001912_p38 | hypothetical protein | phrog_26234 | unknown function | unknown function | 1 | 27564 | 27914 |
| AKU43365.1 | KT001912_p27 | DNA-binding protein | singleton | unknown function | unknown function | 1 | 22417 | 22713 |
| AKU43378.1 | KT001912_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28315 | 28470 |
| AKU43369.1 | KT001912_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23971 | 24162 |
| AKU43364.1 | KT001912_p26 | holin | phrog_263 | holin | lysis | 1 | 22215 | 22451 |
| AKU43360.1 | KT001912_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18967 | 19212 |
| AKU43367.1 | KT001912_p29 | hypothetical protein | phrog_21302 | unknown function | unknown function | 1 | 23037 | 23717 |
| AKU43373.1 | KT001912_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26561 | 26695 |
| AKU43348.1 | KT001912_p10 | hypothetical protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 8611 | 8934 |
| AKU43338.1 | KT001912_p1 | terminase small subunit | phrog_309 | terminase small subunit | head and packaging | 1 | 282 | 758 |
| AKU43388.1 | KT001912_p50 | HNH homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 32864 | 33367 |
| AKU43354.1 | KT001912_p16 | tape measure chaperone | phrog_2115 | tail protein | tail | 1 | 10732 | 11154 |