| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KT008108 |
Definition |
Yersinia phage phiYe-F10, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Teetrevirus; Yersinia virus YeF10. |
DB of origin |
PVOG |
Length |
39210 |
Host Name |
Yersinia enterocolitica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
50.69 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AKQ06769.1 | KT008108_p10 | hypothetical protein | phrog_2490 | unknown function | unknown function | 1 | 7126 | 7266 |
| AKQ06766.1 | KT008108_p7 | hypothetical protein | phrog_2828 | serine-threonine kinase | other | 1 | 2840 | 3949 |
| AKQ06791.1 | KT008108_p32 | head-to-tail joining protein | phrog_449 | head-tail adaptor | connector | 1 | 19003 | 20610 |
| AKQ06764.1 | KT008108_p5 | hypothetical protein | phrog_2385 | unknown function | unknown function | 1 | 2471 | 2668 |
| AKQ06771.1 | KT008108_p12 | hypothetical protein | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 7621 | 8652 |
| AKQ06774.1 | KT008108_p15 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 9641 | 9778 |
| AKQ06802.1 | KT008108_p43 | lysis protein | phrog_920 | holin | lysis | 1 | 35572 | 35775 |
| AKQ06760.1 | KT008108_p1 | hypothetical protein | phrog_2568 | ocr-like anti-restriction | moron, auxiliary metabolic gene and host takeover | 1 | 993 | 1358 |
| AKQ06772.1 | KT008108_p13 | hypothetical protein | phrog_1777 | unknown function | unknown function | 1 | 8825 | 9082 |
| AKQ06778.1 | KT008108_p19 | N-acetylmuramoyl-L-alanine amidase | phrog_822 | amidase | lysis | 1 | 11216 | 11671 |
| AKQ06796.1 | KT008108_p37 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 23834 | 26239 |
| AKQ06803.1 | KT008108_p44 | hypothetical protein | phrog_1351 | terminase small subunit | head and packaging | 1 | 35779 | 36045 |
| AKQ06794.1 | KT008108_p35 | minor capsid protein 10B | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 22952 | 23116 |
| AKQ06770.1 | KT008108_p11 | hypothetical protein | phrog_2949 | dGTPase inhibitor; target for F exclusion | other | 1 | 7266 | 7541 |
| AKQ06785.1 | KT008108_p26 | hypothetical protein | phrog_4790 | host RecBCD nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 16864 | 17046 |
| AKQ06773.1 | KT008108_p14 | hypothetical protein | phrog_4943 | unknown function | unknown function | 1 | 9082 | 9654 |
| AKQ06804.1 | KT008108_p45 | hypothetical protein | phrog_1327 | Rz-like spanin | lysis | 1 | 36188 | 36586 |
| AKQ06787.1 | KT008108_p28 | hypothetical protein | phrog_5008 | unknown function | unknown function | 1 | 17936 | 18049 |
| AKQ06768.1 | KT008108_p9 | hypothetical protein | phrog_6379 | unknown function | unknown function | 1 | 6761 | 7033 |
| AKQ06798.1 | KT008108_p39 | internal virion protein B | phrog_805 | internal virion protein | head and packaging | 1 | 26725 | 27318 |
| AKQ06801.1 | KT008108_p42 | tail fiber protein | phrog_9502 | tail fiber protein | tail | 1 | 33911 | 35560 |
| AKQ06788.1 | KT008108_p29 | hypothetical protein | phrog_1447 | unknown function | unknown function | 1 | 18194 | 18388 |
| AKQ06765.1 | KT008108_p6 | hypothetical protein | phrog_10380 | unknown function | unknown function | 1 | 2655 | 2825 |
| AKQ06782.1 | KT008108_p23 | hypothetical protein | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 14228 | 16342 |
| AKQ06776.1 | KT008108_p17 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 10064 | 10762 |
| AKQ06805.1 | KT008108_p46 | DNA packaging protein B | phrog_38 | terminase large subunit | head and packaging | 1 | 36561 | 38324 |
| AKQ06779.1 | KT008108_p20 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 11852 | 13552 |
| AKQ06789.1 | KT008108_p30 | hypothetical protein | phrog_1391 | unknown function | unknown function | 1 | 18393 | 18644 |
| AKQ06780.1 | KT008108_p21 | hypothetical protein | phrog_1950 | unknown function | unknown function | 1 | 13651 | 13863 |
| AKQ06784.1 | KT008108_p25 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 16658 | 16867 |
| AKQ06793.1 | KT008108_p34 | major capsid protein 10A | phrog_267 | major head protein | head and packaging | 1 | 21801 | 22844 |
| AKQ06783.1 | KT008108_p24 | hypothetical protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 16359 | 16658 |
| AKQ06790.1 | KT008108_p31 | host specificity protein B | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 18672 | 18992 |
| AKQ06800.1 | KT008108_p41 | internal virion protein D | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 29583 | 33545 |
| AKQ06797.1 | KT008108_p38 | hypothetical protein | phrog_308 | internal virion protein | head and packaging | 1 | 26312 | 26722 |
| AKQ06799.1 | KT008108_p40 | internal virion protein C | phrog_1339 | internal virion protein | head and packaging | 1 | 27354 | 29564 |
| AKQ06777.1 | KT008108_p18 | endonuclease | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10762 | 11223 |
| AKQ06775.1 | KT008108_p16 | bacterial RNA polymerase inhibitor | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 9850 | 10011 |
| AKQ06762.1 | KT008108_p3 | hypothetical protein | phrog_13225 | unknown function | unknown function | 1 | 1935 | 2087 |
| AKQ06786.1 | KT008108_p27 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 17043 | 17957 |
| AKQ06767.1 | KT008108_p8 | hypothetical protein | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 4020 | 6674 |
| AKQ06792.1 | KT008108_p33 | capsid assembly protein | phrog_1052 | head assembly | head and packaging | 1 | 20712 | 21644 |
| AKQ06781.1 | KT008108_p22 | hypothetical protein | phrog_2254 | unknown function | unknown function | 1 | 13876 | 14160 |
| AKQ06795.1 | KT008108_p36 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 23228 | 23818 |
| AKQ06761.1 | KT008108_p2 | hypothetical protein | phrog_7202 | unknown function | unknown function | 1 | 1358 | 1507 |
| AKQ06763.1 | KT008108_p4 | hypothetical protein | phrog_17444 | unknown function | unknown function | 1 | 2358 | 2474 |