Genomic map of Yersinia phage phiYe-F10 (KT008108)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT008108
Definition
Yersinia phage phiYe-F10, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Teetrevirus; Yersinia virus YeF10.
DB of origin
PVOG
Length
39210
Host Name
Yersinia enterocolitica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
50.69
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKQ06769.1 KT008108_p10 hypothetical protein phrog_2490 unknown function unknown function 1 7126 7266
AKQ06766.1 KT008108_p7 hypothetical protein phrog_2828 serine-threonine kinase other 1 2840 3949
AKQ06791.1 KT008108_p32 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 19003 20610
AKQ06764.1 KT008108_p5 hypothetical protein phrog_2385 unknown function unknown function 1 2471 2668
AKQ06771.1 KT008108_p12 hypothetical protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 7621 8652
AKQ06774.1 KT008108_p15 hypothetical protein phrog_1312 unknown function unknown function 1 9641 9778
AKQ06802.1 KT008108_p43 lysis protein phrog_920 holin lysis 1 35572 35775
AKQ06760.1 KT008108_p1 hypothetical protein phrog_2568 ocr-like anti-restriction moron, auxiliary metabolic gene and host takeover 1 993 1358
AKQ06772.1 KT008108_p13 hypothetical protein phrog_1777 unknown function unknown function 1 8825 9082
AKQ06778.1 KT008108_p19 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis 1 11216 11671
AKQ06796.1 KT008108_p37 tail tubular protein B phrog_457 tail protein tail 1 23834 26239
AKQ06803.1 KT008108_p44 hypothetical protein phrog_1351 terminase small subunit head and packaging 1 35779 36045
AKQ06794.1 KT008108_p35 minor capsid protein 10B phrog_215 structural protein with Ig domain head and packaging 1 22952 23116
AKQ06770.1 KT008108_p11 hypothetical protein phrog_2949 dGTPase inhibitor; target for F exclusion other 1 7266 7541
AKQ06785.1 KT008108_p26 hypothetical protein phrog_4790 host RecBCD nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 16864 17046
AKQ06773.1 KT008108_p14 hypothetical protein phrog_4943 unknown function unknown function 1 9082 9654
AKQ06804.1 KT008108_p45 hypothetical protein phrog_1327 Rz-like spanin lysis 1 36188 36586
AKQ06787.1 KT008108_p28 hypothetical protein phrog_5008 unknown function unknown function 1 17936 18049
AKQ06768.1 KT008108_p9 hypothetical protein phrog_6379 unknown function unknown function 1 6761 7033
AKQ06798.1 KT008108_p39 internal virion protein B phrog_805 internal virion protein head and packaging 1 26725 27318
AKQ06801.1 KT008108_p42 tail fiber protein phrog_9502 tail fiber protein tail 1 33911 35560
AKQ06788.1 KT008108_p29 hypothetical protein phrog_1447 unknown function unknown function 1 18194 18388
AKQ06765.1 KT008108_p6 hypothetical protein phrog_10380 unknown function unknown function 1 2655 2825
AKQ06782.1 KT008108_p23 hypothetical protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 14228 16342
AKQ06776.1 KT008108_p17 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 10064 10762
AKQ06805.1 KT008108_p46 DNA packaging protein B phrog_38 terminase large subunit head and packaging 1 36561 38324
AKQ06779.1 KT008108_p20 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 11852 13552
AKQ06789.1 KT008108_p30 hypothetical protein phrog_1391 unknown function unknown function 1 18393 18644
AKQ06780.1 KT008108_p21 hypothetical protein phrog_1950 unknown function unknown function 1 13651 13863
AKQ06784.1 KT008108_p25 hypothetical protein phrog_1334 unknown function unknown function 1 16658 16867
AKQ06793.1 KT008108_p34 major capsid protein 10A phrog_267 major head protein head and packaging 1 21801 22844
AKQ06783.1 KT008108_p24 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 16359 16658
AKQ06790.1 KT008108_p31 host specificity protein B phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 18672 18992
AKQ06800.1 KT008108_p41 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 29583 33545
AKQ06797.1 KT008108_p38 hypothetical protein phrog_308 internal virion protein head and packaging 1 26312 26722
AKQ06799.1 KT008108_p40 internal virion protein C phrog_1339 internal virion protein head and packaging 1 27354 29564
AKQ06777.1 KT008108_p18 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 10762 11223
AKQ06775.1 KT008108_p16 bacterial RNA polymerase inhibitor phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 9850 10011
AKQ06762.1 KT008108_p3 hypothetical protein phrog_13225 unknown function unknown function 1 1935 2087
AKQ06786.1 KT008108_p27 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 17043 17957
AKQ06767.1 KT008108_p8 hypothetical protein phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 4020 6674
AKQ06792.1 KT008108_p33 capsid assembly protein phrog_1052 head assembly head and packaging 1 20712 21644
AKQ06781.1 KT008108_p22 hypothetical protein phrog_2254 unknown function unknown function 1 13876 14160
AKQ06795.1 KT008108_p36 tail tubular protein A phrog_446 tail protein tail 1 23228 23818
AKQ06761.1 KT008108_p2 hypothetical protein phrog_7202 unknown function unknown function 1 1358 1507
AKQ06763.1 KT008108_p4 hypothetical protein phrog_17444 unknown function unknown function 1 2358 2474