Genomic map of Thermobifida phage P1312 (KT021004)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT021004
Definition
Thermobifida phage P1312, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
60284
Host Name
Thermobifida fusca
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
65.9
Number of singletons
41
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALA06403.1 KT021004_p30 hypothetical protein singleton unknown function unknown function 1 24099 24554
ALA06419.1 KT021004_p46 hypothetical protein singleton unknown function unknown function 1 34798 35892
ALA06379.1 KT021004_p6 hypothetical protein singleton unknown function unknown function -1 5085 5774
ALA06382.1 KT021004_p9 hypothetical protein singleton unknown function unknown function -1 6363 6644
ALA06427.1 KT021004_p54 ABC-ATPase phrog_18111 ATPase other -1 44577 45035
ALA06391.1 KT021004_p18 tail tape measure protein phrog_1204 tail protein tail 1 9418 14391
ALA06417.1 KT021004_p44 transcriptional regulator phrog_5823 transcriptional regulator transcription regulation -1 31952 33166
ALA06385.1 KT021004_p12 head-tail adaptor phrog_25 head closure Hc1 connector 1 6978 7340
ALA06386.1 KT021004_p13 tail protein phrog_5 tail completion or Neck1 protein connector 1 7340 7732
ALA06397.1 KT021004_p24 glycosyl/glycerophosphate transferase singleton unknown function unknown function 1 21428 22423
ALA06402.1 KT021004_p29 hypothetical protein singleton unknown function unknown function 1 23822 24076
ALA06430.1 KT021004_p57 hypothetical protein singleton unknown function unknown function -1 47286 47870
ALA06399.1 KT021004_p26 hypothetical protein singleton unknown function unknown function -1 23068 23346
ALA06404.1 KT021004_p31 hypothetical protein singleton unknown function unknown function -1 24126 24608
ALA06394.1 KT021004_p21 hypothetical protein phrog_24062 unknown function unknown function 1 19670 20212
ALA06395.1 KT021004_p22 hypothetical protein singleton unknown function unknown function 1 20237 20497
ALA06448.1 KT021004_p75 hypothetical protein singleton unknown function unknown function 1 58214 58504
ALA06392.1 KT021004_p19 tail protein phrog_5313 unknown function unknown function 1 14388 16361
ALA06416.1 KT021004_p43 hypothetical protein phrog_21731 unknown function unknown function -1 30778 31767
ALA06418.1 KT021004_p45 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 33456 34868
ALA06431.1 KT021004_p58 transcriptional regulator singleton unknown function unknown function 1 47971 48198
ALA06413.1 KT021004_p40 hypothetical protein singleton unknown function unknown function -1 29333 30751
ALA06377.1 KT021004_p4 portal protein phrog_104 portal protein head and packaging -1 2795 5101
ALA06442.1 KT021004_p69 hypothetical protein phrog_1590 unknown function unknown function 1 54648 55439
ALA06383.1 KT021004_p10 hypothetical protein singleton unknown function unknown function -1 6376 6954
ALA06387.1 KT021004_p15 tail protein phrog_176 tail terminator connector 1 7720 8157
ALA06444.1 KT021004_p71 hypothetical protein phrog_1590 unknown function unknown function 1 55382 56044
ALA06414.1 KT021004_p41 transposase phrog_506 transposase integration and excision 1 29438 30544
ALA06406.1 KT021004_p33 hypothetical protein singleton unknown function unknown function 1 25042 25404
ALA06438.1 KT021004_p65 DNA polymerase III subunit epsilon phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 52187 52939
ALA06405.1 KT021004_p32 transcriptional regulator phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism 1 24655 24882
ALA06421.1 KT021004_p48 hypothetical protein singleton unknown function unknown function -1 36525 37130
ALA06428.1 KT021004_p55 intergrase/recombinase phrog_95 integrase integration and excision 1 45020 46795
ALA06411.1 KT021004_p38 hypothetical protein singleton unknown function unknown function -1 28406 28819
ALA06396.1 KT021004_p23 O-methyltransferase phrog_2675 DNA methyltransferase other 1 20494 21270
ALA06440.1 KT021004_p67 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53720 54208
ALA06449.1 KT021004_p76 hypothetical protein phrog_464 unknown function unknown function 1 58573 58908
ALA06443.1 KT021004_p70 hypothetical protein singleton unknown function unknown function -1 55343 55657
ALA06375.1 KT021004_p2 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 987 1475
ALA06445.1 KT021004_p73 hypothetical protein singleton unknown function unknown function -1 56311 56919
ALA06380.1 KT021004_p7 capsid protein phrog_267 major head protein head and packaging 1 5121 6005
ALA06425.1 KT021004_p52 DNA segregation ATPase FtsK/SpoIII phrog_31069 FtsK/SpoIIIE-like protein moron, auxiliary metabolic gene and host takeover -1 40484 42526
ALA06378.1 KT021004_p5 hypothetical protein phrog_4638 head scaffolding protein head and packaging 1 4301 5080
ALA06407.1 KT021004_p34 sensory protein kinase CreC singleton unknown function unknown function 1 25530 25973
ALA06389.1 KT021004_p16 hypothetical protein phrog_344 tail assembly chaperone tail 1 8703 9098
ALA06384.1 KT021004_p11 hypothetical protein phrog_31427 unknown function unknown function 1 6487 6963
ALA06436.1 KT021004_p63 exodeoxyribonuclease VIII phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 50446 51360
ALA06415.1 KT021004_p42 hypothetical protein singleton unknown function unknown function 1 30724 31998
ALA06409.1 KT021004_p36 hypothetical protein singleton unknown function unknown function 1 27063 27344
ALA06441.1 KT021004_p68 WhiB family transcriptional regulator phrog_14304 transcriptional regulator WhiB-like transcription regulation 1 54205 54645
ALA06420.1 KT021004_p47 hypothetical protein singleton unknown function unknown function -1 34912 36066
ALA06388.1 KT021004_p14 hypothetical protein singleton unknown function unknown function -1 7696 8508
ALA06446.1 KT021004_p72 hypothetical protein phrog_8064 replication initiation protein DNA, RNA and nucleotide metabolism 1 56029 57438
ALA06423.1 KT021004_p50 hypothetical protein singleton unknown function unknown function 1 38523 40232
ALA06398.1 KT021004_p25 hypothetical protein singleton unknown function unknown function 1 22494 23063
ALA06422.1 KT021004_p49 hypothetical protein singleton unknown function unknown function -1 37840 38460
ALA06450.1 KT021004_p77 hypothetical protein singleton unknown function unknown function -1 59571 59867
ALA06439.1 KT021004_p66 hypothetical protein singleton unknown function unknown function 1 53097 53723
ALA06400.1 KT021004_p27 hypothetical protein singleton unknown function unknown function 1 23167 23517
ALA06376.1 KT021004_p3 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1462 2805
ALA06410.1 KT021004_p37 transcriptional regulator singleton unknown function unknown function -1 27490 28350
ALA06390.1 KT021004_p17 tail protein phrog_337 tail protein tail 1 9119 9406
ALA06393.1 KT021004_p20 phosphodiesterase phrog_24476 phosphodiesterase other 1 16358 19648
ALA06426.1 KT021004_p53 hypothetical protein singleton unknown function unknown function -1 42486 44174
ALA06433.1 KT021004_p60 hypothetical protein singleton unknown function unknown function -1 48866 49402
ALA06401.1 KT021004_p28 hypothetical protein singleton unknown function unknown function -1 23530 23850
ALA06381.1 KT021004_p8 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 6036 6461
ALA06432.1 KT021004_p59 hypothetical protein singleton unknown function unknown function 1 48520 48948
ALA06424.1 KT021004_p51 hypothetical protein singleton unknown function unknown function -1 38715 40349
ALA06408.1 KT021004_p35 N-acetylmuramoyl-L-alanine amidase phrog_1493 endolysin lysis 1 25970 26845
ALA06437.1 KT021004_p64 hypothetical protein singleton unknown function unknown function 1 51357 52118
ALA06434.1 KT021004_p61 hypothetical protein singleton unknown function unknown function 1 49094 49405
ALA06435.1 KT021004_p62 hypothetical protein singleton unknown function unknown function 1 49402 50229
ALA06374.1 KT021004_p1 head morphogenesis protein phrog_24918 head morphogenesis head and packaging 1 243 980
ALA06447.1 KT021004_p74 hypothetical protein phrog_22143 unknown function unknown function 1 57435 58103
ALA06412.1 KT021004_p39 hypothetical protein singleton unknown function unknown function -1 28905 29336
ALA06429.1 KT021004_p56 hypothetical protein singleton unknown function unknown function -1 46846 47265