Genomic map of Streptomyces phage Danzina (KT124228)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT124228
Definition
Streptomyces phage Danzina, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; Streptomyces virus Danzina.
DB of origin
PVOG
Length
50773
Host Name
Streptomyces venezuelae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
65.66
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKY03474.1 KT124228_p19 tapemeasure phrog_305 tail length tape measure protein tail 1 11860 15183
AKY03503.1 KT124228_p48 hypothetical protein phrog_4123 unknown function unknown function 1 32263 32616
AKY03470.1 KT124228_p15 hypothetical protein phrog_123 tail terminator connector 1 9748 10251
AKY03465.1 KT124228_p10 scaffold protein phrog_233 head scaffolding protein head and packaging 1 6804 7349
AKY03480.1 KT124228_p25 hypothetical protein phrog_988 tail protein tail 1 20122 21468
AKY03456.1 KT124228_p1 hypothetical protein phrog_4207 unknown function unknown function -1 91 297
AKY03521.1 KT124228_p66 hypothetical protein phrog_4867 unknown function unknown function -1 44951 45307
AKY03488.1 KT124228_p33 hypothetical protein phrog_3912 unknown function unknown function 1 25586 26110
AKY03483.1 KT124228_p28 hypothetical protein phrog_4092 unknown function unknown function 1 22932 23201
AKY03501.1 KT124228_p46 hypothetical protein phrog_1340 unknown function unknown function 1 31515 31871
AKY03511.1 KT124228_p56 DNA polymerase III subunit alpha phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism -1 38236 41718
AKY03514.1 KT124228_p59 hypothetical protein phrog_4024 unknown function unknown function -1 42495 42908
AKY03510.1 KT124228_p55 hypothetical protein phrog_5971 unknown function unknown function -1 38044 38196
AKY03502.1 KT124228_p47 transcriptional regulator phrog_3512 sigma factor transcription regulation 1 31868 32266
AKY03531.1 KT124228_p76 hypothetical protein phrog_2563 unknown function unknown function -1 49569 49949
AKY03528.1 KT124228_p73 hypothetical protein phrog_4313 unknown function unknown function -1 47734 48711
AKY03518.1 KT124228_p63 hypothetical protein phrog_9416 unknown function unknown function -1 44074 44349
AKY03508.1 KT124228_p53 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 37053 37766
AKY03517.1 KT124228_p62 hypothetical protein phrog_3991 unknown function unknown function -1 43835 44077
AKY03524.1 KT124228_p69 hypothetical protein phrog_3908 unknown function unknown function -1 46338 46541
AKY03485.1 KT124228_p30 immunity repressor phrog_3929 transcriptional repressor transcription regulation 1 23606 24058
AKY03466.1 KT124228_p11 major capsid protein phrog_283 major head protein head and packaging 1 7420 8499
AKY03463.1 KT124228_p8 portal protein phrog_104 portal protein head and packaging 1 4255 5691
AKY03506.1 KT124228_p51 hypothetical protein phrog_11213 unknown function unknown function -1 35055 35231
AKY03499.1 KT124228_p44 hypothetical protein phrog_3979 unknown function unknown function 1 30087 30305
AKY03478.1 KT124228_p23 hypothetical protein phrog_4013 unknown function unknown function 1 17562 19547
AKY03530.1 KT124228_p75 hypothetical protein phrog_4485 unknown function unknown function -1 49352 49471
AKY03468.1 KT124228_p13 head-tail adaptor phrog_320 head closure Hc1 connector 1 9015 9350
AKY03482.1 KT124228_p27 LysM phrog_1493 endolysin lysis 1 21847 22935
AKY03462.1 KT124228_p7 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2576 4222
AKY03500.1 KT124228_p45 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 30298 31488
AKY03522.1 KT124228_p67 hypothetical protein phrog_586 unknown function unknown function -1 45322 45693
AKY03516.1 KT124228_p61 hypothetical protein phrog_5209 unknown function unknown function -1 43533 43838
AKY03459.1 KT124228_p4 hypothetical protein phrog_3555 unknown function unknown function 1 1629 1859
AKY03520.1 KT124228_p65 hypothetical protein phrog_4785 unknown function unknown function -1 44606 44866
AKY03527.1 KT124228_p72 hypothetical protein phrog_4275 unknown function unknown function -1 47512 47637
AKY03492.1 KT124228_p37 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 27222 28097
AKY03464.1 KT124228_p9 hypothetical protein phrog_193 head maturation protease head and packaging 1 5688 6800
AKY03484.1 KT124228_p29 hypothetical protein phrog_4061 unknown function unknown function -1 23256 23519
AKY03479.1 KT124228_p24 hypothetical protein phrog_4817 unknown function unknown function 1 19547 20047
AKY03513.1 KT124228_p58 hypothetical protein phrog_3965 unknown function unknown function -1 41980 42411
AKY03457.1 KT124228_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 679 1011
AKY03493.1 KT124228_p38 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28166 28528
AKY03473.1 KT124228_p17 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 11144 11856
AKY03505.1 KT124228_p50 Lsr2 phrog_6509 Lsr2-like DNA bridging protein DNA, RNA and nucleotide metabolism 1 34850 35080
AKY03512.1 KT124228_p57 hypothetical protein phrog_3424 unknown function unknown function -1 41730 41966
AKY03487.1 KT124228_p32 exonuclease phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 24494 25465
AKY03467.1 KT124228_p12 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8569 9018
AKY03526.1 KT124228_p71 hypothetical protein phrog_2355 unknown function unknown function -1 47079 47492
AKY03490.1 KT124228_p35 hypothetical protein phrog_1288 unknown function unknown function 1 26298 26735
AKY03504.1 KT124228_p49 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 32713 34803
AKY03471.1 KT124228_p16 hypothetical protein phrog_117 major tail protein tail 1 10268 11023
AKY03475.1 KT124228_p20 minor tail protein phrog_33 distal tail protein Dit tail 1 15187 16044
AKY03498.1 KT124228_p43 hypothetical protein phrog_6217 unknown function unknown function 1 29932 30090
AKY03477.1 KT124228_p22 hypothetical protein phrog_1276 unknown function unknown function 1 17264 17560
AKY03525.1 KT124228_p70 hypothetical protein phrog_4239 unknown function unknown function -1 46543 46953
AKY03472.1 KT124228_p18 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 11144 11467
AKY03494.1 KT124228_p39 hypothetical protein phrog_4673 unknown function unknown function 1 28525 28677
AKY03491.1 KT124228_p36 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 26809 27285
AKY03461.1 KT124228_p6 hypothetical protein phrog_226 minor tail protein tail 1 2130 2555
AKY03523.1 KT124228_p68 HNH-domain protein phrog_4842 HNH endonuclease DNA, RNA and nucleotide metabolism -1 45780 46235
AKY03519.1 KT124228_p64 hypothetical protein phrog_9778 unknown function unknown function -1 44433 44609
AKY03495.1 KT124228_p40 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism 1 28664 29098
AKY03460.1 KT124228_p5 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 1865 2116
AKY03489.1 KT124228_p34 hypothetical protein phrog_8950 unknown function unknown function 1 26107 26253
AKY03458.1 KT124228_p3 hypothetical protein singleton unknown function unknown function 1 1290 1550
AKY03496.1 KT124228_p41 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 28932 29597
AKY03469.1 KT124228_p14 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 9350 9748
AKY03481.1 KT124228_p26 hypothetical protein phrog_3534 unknown function unknown function 1 21468 21821
AKY03507.1 KT124228_p52 serine integrase phrog_95 integrase integration and excision 1 35300 36943
AKY03515.1 KT124228_p60 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other -1 42949 43536
AKY03529.1 KT124228_p74 hypothetical protein phrog_3994 unknown function unknown function -1 48832 49317
AKY03497.1 KT124228_p42 hypothetical protein phrog_4022 unknown function unknown function 1 29594 29935
AKY03476.1 KT124228_p21 minor tail protein phrog_538 minor tail protein tail 1 16049 17260
AKY03509.1 KT124228_p54 hypothetical protein phrog_4071 unknown function unknown function -1 37763 38041
AKY03486.1 KT124228_p31 hypothetical protein phrog_5250 unknown function unknown function 1 24195 24497