Genomic map of Vibrio phage H188 (KT160311)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT160311
Definition
Vibrio phage H188, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
DB of origin
PVOG
Length
50364
Host Name
Vibrio kanaloae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
43.63
Number of singletons
31
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AKU42604.1 KT160311_p23 hypothetical protein phrog_717 unknown function unknown function -1 14459 14683
AKU42634.1 KT160311_p53 hypothetical protein phrog_27352 unknown function unknown function 1 38041 38514
AKU42613.1 KT160311_p32 large terminase subunit phrog_15 terminase large subunit head and packaging -1 20797 22755
AKU42630.1 KT160311_p49 hypothetical protein singleton unknown function unknown function 1 36845 37024
AKU42653.1 KT160311_p72 hypothetical protein singleton unknown function unknown function -1 48185 48385
AKU42655.1 KT160311_p74 hypothetical protein singleton unknown function unknown function 1 48700 48993
AKU42625.1 KT160311_p44 Cas4-domain exonuclease phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism 1 32485 33543
AKU42589.1 KT160311_p8 hypothetical protein singleton unknown function unknown function -1 5128 5559
AKU42614.1 KT160311_p33 hypothetical protein singleton unknown function unknown function -1 22755 23453
AKU42596.1 KT160311_p15 hypothetical protein phrog_4648 unknown function unknown function -1 10873 11289
AKU42627.1 KT160311_p46 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 33917 35563
AKU42588.1 KT160311_p7 tail protein phrog_177 baseplate hub tail -1 3840 5090
AKU42605.1 KT160311_p24 hypothetical protein phrog_4671 unknown function unknown function -1 14692 15360
AKU42654.1 KT160311_p73 hypothetical protein singleton unknown function unknown function 1 48527 48700
AKU42635.1 KT160311_p54 hypothetical protein phrog_5434 unknown function unknown function 1 38517 39047
AKU42610.1 KT160311_p29 protease phrog_53 head maturation protease head and packaging -1 17587 18768
AKU42645.1 KT160311_p64 hypothetical protein singleton unknown function unknown function 1 41686 42339
AKU42637.1 KT160311_p56 hypothetical protein phrog_2452 unknown function unknown function 1 39222 39443
AKU42611.1 KT160311_p30 portal protein phrog_21 portal protein head and packaging -1 18768 20399
AKU42591.1 KT160311_p10 DNA methylase phrog_67 DNA methyltransferase other -1 6958 7890
AKU42648.1 KT160311_p67 tail fiber assembly protein phrog_1807 tail fiber protein tail -1 44974 45690
AKU42586.1 KT160311_p5 hypothetical protein phrog_29722 unknown function unknown function -1 2462 3112
AKU42612.1 KT160311_p31 hypothetical protein phrog_118 head-tail adaptor connector -1 20475 20732
AKU42652.1 KT160311_p71 hypothetical protein singleton unknown function unknown function -1 47758 48087
AKU42646.1 KT160311_p65 hypothetical protein singleton unknown function unknown function -1 42456 42773
AKU42601.1 KT160311_p20 hypothetical protein phrog_6504 unknown function unknown function 1 12380 12541
AKU42617.1 KT160311_p36 hypothetical protein singleton unknown function unknown function -1 25599 26081
AKU42593.1 KT160311_p12 regulatory protein phrog_63 anti-repressor Ant transcription regulation -1 8244 8936
AKU42656.1 KT160311_p75 hypothetical protein phrog_5335 unknown function unknown function -1 49024 49872
AKU42603.1 KT160311_p22 tail protein phrog_165 tail sheath tail -1 12986 14446
AKU42657.1 KT160311_p76 hypothetical protein singleton unknown function unknown function -1 49903 50358
AKU42590.1 KT160311_p9 hypothetical protein phrog_184 baseplate hub tail -1 5640 6887
AKU42632.1 KT160311_p51 hypothetical protein singleton unknown function unknown function 1 37239 37652
AKU42620.1 KT160311_p39 bifunctional DNA primase/polymerase domain protein phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 27217 29475
AKU42602.1 KT160311_p21 hypothetical protein phrog_4699 tail tube protein tail -1 12607 12984
AKU42619.1 KT160311_p38 hypothetical protein singleton unknown function unknown function 1 26972 27205
AKU42633.1 KT160311_p52 hypothetical protein phrog_409 transcriptional regulator transcription regulation 1 37649 38044
AKU42615.1 KT160311_p34 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 23535 24611
AKU42644.1 KT160311_p63 hypothetical protein singleton unknown function unknown function 1 41295 41483
AKU42616.1 KT160311_p35 hypothetical protein phrog_4688 minor tail protein tail -1 24823 25536
AKU42595.1 KT160311_p14 hypothetical protein singleton unknown function unknown function -1 10640 10768
AKU42585.1 KT160311_p4 hypothetical protein singleton unknown function unknown function -1 2271 2462
AKU42636.1 KT160311_p55 hypothetical protein singleton unknown function unknown function 1 39022 39219
AKU42582.1 KT160311_p1 tail protein phrog_6 baseplate wedge subunit tail -1 433 1626
AKU42631.1 KT160311_p50 hypothetical protein singleton unknown function unknown function 1 37021 37242
AKU42641.1 KT160311_p60 hypothetical protein singleton unknown function unknown function 1 40660 40800
AKU42583.1 KT160311_p2 hypothetical protein phrog_180 baseplate wedge subunit tail -1 1619 2032
AKU42651.1 KT160311_p70 hypothetical protein singleton unknown function unknown function -1 47318 47692
AKU42642.1 KT160311_p61 hypothetical protein singleton unknown function unknown function 1 40800 40937
AKU42587.1 KT160311_p6 hypothetical protein phrog_11 baseplate spike tail -1 3196 3852
AKU42650.1 KT160311_p69 hypothetical protein singleton unknown function unknown function -1 46961 47305
AKU42609.1 KT160311_p28 hypothetical protein phrog_49 head decoration head and packaging -1 17189 17587
AKU42594.1 KT160311_p13 tail protein phrog_3654 unknown function unknown function -1 9035 10636
AKU42643.1 KT160311_p62 peptidase phrog_894 endolysin lysis 1 40934 41278
AKU42599.1 KT160311_p18 hypothetical protein singleton unknown function unknown function 1 12065 12220
AKU42628.1 KT160311_p47 RNaseH-like domain protein phrog_1770 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35563 36003
AKU42622.1 KT160311_p41 hypothetical protein phrog_2300 unknown function unknown function 1 30365 30892
AKU42639.1 KT160311_p58 NTP-PPase phrog_671 nucleotide pyrophosphohydrolase other 1 39718 40149
AKU42621.1 KT160311_p40 RecA-like NTPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 29551 30306
AKU42606.1 KT160311_p25 hypothetical protein phrog_4598 head closure Hc1 connector -1 15350 15691
AKU42649.1 KT160311_p68 tail fiber protein singleton unknown function unknown function -1 45687 46925
AKU42647.1 KT160311_p66 hypothetical protein singleton unknown function unknown function -1 42784 44769
AKU42638.1 KT160311_p57 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 39440 39721
AKU42623.1 KT160311_p42 TolA protein phrog_1376 unknown function unknown function 1 30951 31865
AKU42607.1 KT160311_p26 hypothetical protein singleton unknown function unknown function -1 15733 16092
AKU42600.1 KT160311_p19 hypothetical protein singleton unknown function unknown function 1 12202 12393
AKU42640.1 KT160311_p59 YopX protein phrog_98 unknown function unknown function 1 40253 40663
AKU42629.1 KT160311_p48 EaC protein phrog_2260 unknown function unknown function 1 36159 36749
AKU42618.1 KT160311_p37 HNH endonuclease singleton unknown function unknown function 1 26565 26912
AKU42598.1 KT160311_p17 hypothetical protein singleton unknown function unknown function 1 11673 11858
AKU42584.1 KT160311_p3 hypothetical protein singleton unknown function unknown function -1 2125 2274
AKU42608.1 KT160311_p27 major capsid protein phrog_29 major head protein head and packaging -1 16096 17175
AKU42626.1 KT160311_p45 GTP-binding protein phrog_289 GTP-binding domain other 1 33540 33923
AKU42624.1 KT160311_p43 exodeoxyribonuclease VIII phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 31877 32419
AKU42592.1 KT160311_p11 hypothetical protein singleton unknown function unknown function -1 8073 8234
AKU42597.1 KT160311_p16 hypothetical protein phrog_268 unknown function unknown function 1 11455 11670