functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
KT246485 |
Definition |
Mycobacterium phage OBUpride, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gilesvirus; Mycobacterium virus Giles. |
DB of origin |
PVOG |
Length |
53790 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
84 |
%GC |
67.5 |
Number of singletons |
5 |
Number of paralogs |
1 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
ALA06671.1 | KT246485_p27 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 23365 | 24603 |
ALA06670.1 | KT246485_p26 | minor tail subunit | phrog_2235 | minor tail protein | tail | 1 | 23114 | 23359 |
ALA06660.1 | KT246485_p16 | hypothetical protein | phrog_37321 | unknown function | unknown function | 1 | 10505 | 10909 |
ALA06692.1 | KT246485_p48 | hypothetical protein | phrog_30295 | unknown function | unknown function | -1 | 35101 | 36057 |
ALA06713.1 | KT246485_p69 | hypothetical protein | phrog_33769 | unknown function | unknown function | 1 | 46787 | 47284 |
ALA06646.1 | KT246485_p2 | hypothetical protein | phrog_36626 | unknown function | unknown function | -1 | 630 | 800 |
ALA06711.1 | KT246485_p67 | DNA methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 44912 | 45574 |
ALA06725.1 | KT246485_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51809 | 52642 |
ALA06653.1 | KT246485_p9 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 6580 | 7536 |
ALA06669.1 | KT246485_p25 | minor tail subunit | phrog_3493 | minor tail protein | tail | 1 | 20847 | 23111 |
ALA06698.1 | KT246485_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38765 | 38917 |
ALA06657.1 | KT246485_p13 | hypothetical protein | phrog_31131 | unknown function | unknown function | 1 | 9115 | 9522 |
ALA06716.1 | KT246485_p72 | hypothetical protein | phrog_10119 | unknown function | unknown function | 1 | 48146 | 48292 |
ALA06659.1 | KT246485_p15 | hypothetical protein | phrog_117 | major tail protein | tail | 1 | 9932 | 10471 |
ALA06683.1 | KT246485_p39 | hypothetical protein | phrog_37168 | unknown function | unknown function | -1 | 31885 | 32040 |
ALA06707.1 | KT246485_p63 | hypothetical protein | phrog_6554 | unknown function | unknown function | 1 | 43620 | 43958 |
ALA06689.1 | KT246485_p45 | hypothetical protein | phrog_29593 | unknown function | unknown function | -1 | 34189 | 34416 |
ALA06672.1 | KT246485_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24627 | 24983 |
ALA06717.1 | KT246485_p73 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 48289 | 48900 |
ALA06712.1 | KT246485_p68 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 45759 | 46790 |
ALA06702.1 | KT246485_p58 | hypothetical protein | phrog_33897 | unknown function | unknown function | 1 | 41446 | 41763 |
ALA06680.1 | KT246485_p36 | hypothetical protein | phrog_798 | unknown function | unknown function | 1 | 30323 | 30943 |
ALA06687.1 | KT246485_p43 | hypothetical protein | phrog_549 | unknown function | unknown function | -1 | 32885 | 33310 |
ALA06688.1 | KT246485_p44 | hypothetical protein | phrog_4095 | unknown function | unknown function | -1 | 33419 | 34120 |
ALA06656.1 | KT246485_p12 | hypothetical protein | phrog_18149 | head closure Hc1 | connector | 1 | 8429 | 9112 |
ALA06693.1 | KT246485_p49 | hypothetical protein | phrog_34968 | unknown function | unknown function | -1 | 36182 | 36598 |
ALA06677.1 | KT246485_p33 | lysin B | phrog_102 | endolysin | lysis | 1 | 28333 | 29568 |
ALA06665.1 | KT246485_p21 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 16309 | 17403 |
ALA06690.1 | KT246485_p46 | hypothetical protein | phrog_31194 | unknown function | unknown function | -1 | 34413 | 34718 |
ALA06718.1 | KT246485_p74 | WhiB-like transcriptional regulator | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 48893 | 49201 |
ALA06681.1 | KT246485_p37 | hypothetical protein | phrog_11690 | tail protein | tail | 1 | 30946 | 31734 |
ALA06679.1 | KT246485_p35 | hypothetical protein | phrog_1177 | unknown function | unknown function | 1 | 30010 | 30330 |
ALA06709.1 | KT246485_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44509 | 44661 |
ALA06684.1 | KT246485_p40 | hypothetical protein | phrog_27984 | unknown function | unknown function | -1 | 32106 | 32330 |
ALA06685.1 | KT246485_p41 | hypothetical protein | phrog_33446 | unknown function | unknown function | -1 | 32327 | 32701 |
ALA06719.1 | KT246485_p75 | hypothetical protein | phrog_18663 | unknown function | unknown function | 1 | 49229 | 49570 |
ALA06691.1 | KT246485_p47 | hypothetical protein | phrog_2761 | unknown function | unknown function | -1 | 34730 | 35035 |
ALA06661.1 | KT246485_p17 | tail assembly chaperone | phrog_15731 | tail assembly chaperone | tail | 1 | 10887 | 11783 |
ALA06654.1 | KT246485_p10 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 7533 | 7973 |
ALA06723.1 | KT246485_p79 | hypothetical protein | phrog_29205 | unknown function | unknown function | 1 | 50713 | 51201 |
ALA06699.1 | KT246485_p55 | RecE-like protein | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 38914 | 39885 |
ALA06655.1 | KT246485_p11 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 7977 | 8429 |
ALA06676.1 | KT246485_p32 | lysin A | phrog_880 | endolysin | lysis | 1 | 26975 | 28333 |
ALA06664.1 | KT246485_p20 | tapemeasure | phrog_9228 | tail length tape measure protein | tail | 1 | 12216 | 16295 |
ALA06694.1 | KT246485_p50 | DNA-binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36945 | 37142 |
ALA06649.1 | KT246485_p5 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1855 | 3489 |
ALA06727.1 | KT246485_p83 | hypothetical protein | phrog_32051 | unknown function | unknown function | 1 | 53033 | 53191 |
ALA06658.1 | KT246485_p14 | hypothetical protein | phrog_6485 | tail terminator | connector | 1 | 9515 | 9916 |
ALA06675.1 | KT246485_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26843 | 26956 |
ALA06682.1 | KT246485_p38 | hypothetical protein | phrog_38603 | unknown function | unknown function | 1 | 31736 | 31888 |
ALA06715.1 | KT246485_p71 | hypothetical protein | phrog_33633 | unknown function | unknown function | 1 | 47691 | 48146 |
ALA06663.1 | KT246485_p19 | hypothetical protein | phrog_29514 | unknown function | unknown function | 1 | 12065 | 12223 |
ALA06705.1 | KT246485_p61 | hypothetical protein | phrog_29159 | unknown function | unknown function | 1 | 42900 | 43211 |
ALA06722.1 | KT246485_p78 | hypothetical protein | phrog_33233 | unknown function | unknown function | 1 | 50360 | 50716 |
ALA06645.1 | KT246485_p1 | terminase small subunit | phrog_26270 | terminase small subunit | head and packaging | 1 | 71 | 571 |
ALA06648.1 | KT246485_p4 | hypothetical protein | phrog_1318 | unknown function | unknown function | -1 | 1617 | 1826 |
ALA06651.1 | KT246485_p7 | Clp-like protease | phrog_2976 | head maturation protease | head and packaging | 1 | 4908 | 6092 |
ALA06666.1 | KT246485_p22 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 17400 | 19142 |
ALA06708.1 | KT246485_p64 | DnaQ-like exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 43955 | 44509 |
ALA06701.1 | KT246485_p57 | hypothetical protein | phrog_6734 | unknown function | unknown function | 1 | 41309 | 41449 |
ALA06704.1 | KT246485_p60 | hypothetical protein | phrog_32877 | unknown function | unknown function | 1 | 42331 | 42903 |
ALA06714.1 | KT246485_p70 | DNA methyltransferase | phrog_31969 | unknown function | unknown function | 1 | 47281 | 47694 |
ALA06697.1 | KT246485_p53 | hypothetical protein | phrog_1590 | unknown function | unknown function | 1 | 37905 | 38768 |
ALA06650.1 | KT246485_p6 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 3506 | 4915 |
ALA06720.1 | KT246485_p76 | hypothetical protein | phrog_3848 | unknown function | unknown function | 1 | 49567 | 49980 |
ALA06652.1 | KT246485_p8 | hypothetical protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 6094 | 6546 |
ALA06721.1 | KT246485_p77 | hypothetical protein | phrog_18038 | unknown function | unknown function | 1 | 49977 | 50363 |
ALA06726.1 | KT246485_p82 | hypothetical protein | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 52647 | 53036 |
ALA06678.1 | KT246485_p34 | holin | phrog_565 | holin | lysis | 1 | 29590 | 30000 |
ALA06668.1 | KT246485_p24 | minor tail subunit | phrog_1565 | minor tail protein | tail | 1 | 19744 | 20847 |
ALA06673.1 | KT246485_p29 | integrase | phrog_1 | integrase | integration and excision | -1 | 25279 | 26514 |
ALA06667.1 | KT246485_p23 | hypothetical protein | phrog_13217 | minor tail protein | tail | 1 | 19142 | 19747 |
ALA06728.1 | KT246485_p84 | hypothetical protein | phrog_32490 | unknown function | unknown function | 1 | 53292 | 53657 |
ALA06700.1 | KT246485_p56 | RecT-like protein | phrog_4171 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 39882 | 41312 |
ALA06724.1 | KT246485_p80 | hypothetical protein | phrog_31102 | unknown function | unknown function | 1 | 51198 | 51608 |
ALA06696.1 | KT246485_p52 | hypothetical protein | phrog_28168 | unknown function | unknown function | 1 | 37450 | 37833 |
ALA06686.1 | KT246485_p42 | hypothetical protein | phrog_11565 | unknown function | unknown function | -1 | 32698 | 32871 |
ALA06647.1 | KT246485_p3 | hypothetical protein | phrog_31632 | unknown function | unknown function | -1 | 930 | 1553 |
ALA06703.1 | KT246485_p59 | hypothetical protein | phrog_25539 | unknown function | unknown function | 1 | 41756 | 42334 |
ALA06710.1 | KT246485_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44658 | 44915 |
ALA06695.1 | KT246485_p51 | hypothetical protein | phrog_35547 | unknown function | unknown function | 1 | 37139 | 37453 |
ALA06674.1 | KT246485_p30 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 26616 | 26816 |
ALA06706.1 | KT246485_p62 | hypothetical protein | phrog_18585 | unknown function | unknown function | 1 | 43208 | 43627 |
ALA06662.1 | KT246485_p18 | hypothetical protein | phrog_27289 | unknown function | unknown function | 1 | 11821 | 12063 |