Genomic map of Mycobacterium phage OBUpride (KT246485)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT246485
Definition
Mycobacterium phage OBUpride, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Gilesvirus; Mycobacterium virus Giles.
DB of origin
PVOG
Length
53790
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
67.5
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALA06671.1 KT246485_p27 hypothetical protein phrog_416 minor tail protein tail 1 23365 24603
ALA06670.1 KT246485_p26 minor tail subunit phrog_2235 minor tail protein tail 1 23114 23359
ALA06660.1 KT246485_p16 hypothetical protein phrog_37321 unknown function unknown function 1 10505 10909
ALA06692.1 KT246485_p48 hypothetical protein phrog_30295 unknown function unknown function -1 35101 36057
ALA06713.1 KT246485_p69 hypothetical protein phrog_33769 unknown function unknown function 1 46787 47284
ALA06646.1 KT246485_p2 hypothetical protein phrog_36626 unknown function unknown function -1 630 800
ALA06711.1 KT246485_p67 DNA methyltransferase phrog_67 DNA methyltransferase other 1 44912 45574
ALA06725.1 KT246485_p81 hypothetical protein singleton unknown function unknown function 1 51809 52642
ALA06653.1 KT246485_p9 major capsid protein phrog_1650 major head protein head and packaging 1 6580 7536
ALA06669.1 KT246485_p25 minor tail subunit phrog_3493 minor tail protein tail 1 20847 23111
ALA06698.1 KT246485_p54 hypothetical protein singleton unknown function unknown function 1 38765 38917
ALA06657.1 KT246485_p13 hypothetical protein phrog_31131 unknown function unknown function 1 9115 9522
ALA06716.1 KT246485_p72 hypothetical protein phrog_10119 unknown function unknown function 1 48146 48292
ALA06659.1 KT246485_p15 hypothetical protein phrog_117 major tail protein tail 1 9932 10471
ALA06683.1 KT246485_p39 hypothetical protein phrog_37168 unknown function unknown function -1 31885 32040
ALA06707.1 KT246485_p63 hypothetical protein phrog_6554 unknown function unknown function 1 43620 43958
ALA06689.1 KT246485_p45 hypothetical protein phrog_29593 unknown function unknown function -1 34189 34416
ALA06672.1 KT246485_p28 hypothetical protein phrog_240 head protein head and packaging 1 24627 24983
ALA06717.1 KT246485_p73 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 48289 48900
ALA06712.1 KT246485_p68 hypothetical protein phrog_1882 unknown function unknown function 1 45759 46790
ALA06702.1 KT246485_p58 hypothetical protein phrog_33897 unknown function unknown function 1 41446 41763
ALA06680.1 KT246485_p36 hypothetical protein phrog_798 unknown function unknown function 1 30323 30943
ALA06687.1 KT246485_p43 hypothetical protein phrog_549 unknown function unknown function -1 32885 33310
ALA06688.1 KT246485_p44 hypothetical protein phrog_4095 unknown function unknown function -1 33419 34120
ALA06656.1 KT246485_p12 hypothetical protein phrog_18149 head closure Hc1 connector 1 8429 9112
ALA06693.1 KT246485_p49 hypothetical protein phrog_34968 unknown function unknown function -1 36182 36598
ALA06677.1 KT246485_p33 lysin B phrog_102 endolysin lysis 1 28333 29568
ALA06665.1 KT246485_p21 minor tail subunit phrog_106 minor tail protein tail 1 16309 17403
ALA06690.1 KT246485_p46 hypothetical protein phrog_31194 unknown function unknown function -1 34413 34718
ALA06718.1 KT246485_p74 WhiB-like transcriptional regulator phrog_472 WhiB transcriptional factor transcription regulation 1 48893 49201
ALA06681.1 KT246485_p37 hypothetical protein phrog_11690 tail protein tail 1 30946 31734
ALA06679.1 KT246485_p35 hypothetical protein phrog_1177 unknown function unknown function 1 30010 30330
ALA06709.1 KT246485_p65 hypothetical protein singleton unknown function unknown function 1 44509 44661
ALA06684.1 KT246485_p40 hypothetical protein phrog_27984 unknown function unknown function -1 32106 32330
ALA06685.1 KT246485_p41 hypothetical protein phrog_33446 unknown function unknown function -1 32327 32701
ALA06719.1 KT246485_p75 hypothetical protein phrog_18663 unknown function unknown function 1 49229 49570
ALA06691.1 KT246485_p47 hypothetical protein phrog_2761 unknown function unknown function -1 34730 35035
ALA06661.1 KT246485_p17 tail assembly chaperone phrog_15731 tail assembly chaperone tail 1 10887 11783
ALA06654.1 KT246485_p10 hypothetical protein phrog_2322 head-tail connector protein connector 1 7533 7973
ALA06723.1 KT246485_p79 hypothetical protein phrog_29205 unknown function unknown function 1 50713 51201
ALA06699.1 KT246485_p55 RecE-like protein phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 38914 39885
ALA06655.1 KT246485_p11 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 7977 8429
ALA06676.1 KT246485_p32 lysin A phrog_880 endolysin lysis 1 26975 28333
ALA06664.1 KT246485_p20 tapemeasure phrog_9228 tail length tape measure protein tail 1 12216 16295
ALA06694.1 KT246485_p50 DNA-binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 36945 37142
ALA06649.1 KT246485_p5 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1855 3489
ALA06727.1 KT246485_p83 hypothetical protein phrog_32051 unknown function unknown function 1 53033 53191
ALA06658.1 KT246485_p14 hypothetical protein phrog_6485 tail terminator connector 1 9515 9916
ALA06675.1 KT246485_p31 hypothetical protein singleton unknown function unknown function 1 26843 26956
ALA06682.1 KT246485_p38 hypothetical protein phrog_38603 unknown function unknown function 1 31736 31888
ALA06715.1 KT246485_p71 hypothetical protein phrog_33633 unknown function unknown function 1 47691 48146
ALA06663.1 KT246485_p19 hypothetical protein phrog_29514 unknown function unknown function 1 12065 12223
ALA06705.1 KT246485_p61 hypothetical protein phrog_29159 unknown function unknown function 1 42900 43211
ALA06722.1 KT246485_p78 hypothetical protein phrog_33233 unknown function unknown function 1 50360 50716
ALA06645.1 KT246485_p1 terminase small subunit phrog_26270 terminase small subunit head and packaging 1 71 571
ALA06648.1 KT246485_p4 hypothetical protein phrog_1318 unknown function unknown function -1 1617 1826
ALA06651.1 KT246485_p7 Clp-like protease phrog_2976 head maturation protease head and packaging 1 4908 6092
ALA06666.1 KT246485_p22 minor tail subunit phrog_110 minor tail protein tail 1 17400 19142
ALA06708.1 KT246485_p64 DnaQ-like exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 43955 44509
ALA06701.1 KT246485_p57 hypothetical protein phrog_6734 unknown function unknown function 1 41309 41449
ALA06704.1 KT246485_p60 hypothetical protein phrog_32877 unknown function unknown function 1 42331 42903
ALA06714.1 KT246485_p70 DNA methyltransferase phrog_31969 unknown function unknown function 1 47281 47694
ALA06697.1 KT246485_p53 hypothetical protein phrog_1590 unknown function unknown function 1 37905 38768
ALA06650.1 KT246485_p6 portal protein phrog_113 portal protein head and packaging 1 3506 4915
ALA06720.1 KT246485_p76 hypothetical protein phrog_3848 unknown function unknown function 1 49567 49980
ALA06652.1 KT246485_p8 hypothetical protein phrog_673 head scaffolding protein head and packaging 1 6094 6546
ALA06721.1 KT246485_p77 hypothetical protein phrog_18038 unknown function unknown function 1 49977 50363
ALA06726.1 KT246485_p82 hypothetical protein phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 52647 53036
ALA06678.1 KT246485_p34 holin phrog_565 holin lysis 1 29590 30000
ALA06668.1 KT246485_p24 minor tail subunit phrog_1565 minor tail protein tail 1 19744 20847
ALA06673.1 KT246485_p29 integrase phrog_1 integrase integration and excision -1 25279 26514
ALA06667.1 KT246485_p23 hypothetical protein phrog_13217 minor tail protein tail 1 19142 19747
ALA06728.1 KT246485_p84 hypothetical protein phrog_32490 unknown function unknown function 1 53292 53657
ALA06700.1 KT246485_p56 RecT-like protein phrog_4171 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 39882 41312
ALA06724.1 KT246485_p80 hypothetical protein phrog_31102 unknown function unknown function 1 51198 51608
ALA06696.1 KT246485_p52 hypothetical protein phrog_28168 unknown function unknown function 1 37450 37833
ALA06686.1 KT246485_p42 hypothetical protein phrog_11565 unknown function unknown function -1 32698 32871
ALA06647.1 KT246485_p3 hypothetical protein phrog_31632 unknown function unknown function -1 930 1553
ALA06703.1 KT246485_p59 hypothetical protein phrog_25539 unknown function unknown function 1 41756 42334
ALA06710.1 KT246485_p66 hypothetical protein singleton unknown function unknown function 1 44658 44915
ALA06695.1 KT246485_p51 hypothetical protein phrog_35547 unknown function unknown function 1 37139 37453
ALA06674.1 KT246485_p30 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 26616 26816
ALA06706.1 KT246485_p62 hypothetical protein phrog_18585 unknown function unknown function 1 43208 43627
ALA06662.1 KT246485_p18 hypothetical protein phrog_27289 unknown function unknown function 1 11821 12063