| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KT355473 |
Definition |
Arthrobacter phage Jessica, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Decurrovirus; unclassified Decurrovirus. |
DB of origin |
PVOG |
Length |
15556 |
Host Name |
Arthrobacter sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
26 |
%GC |
60.11 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALF00762.1 | KT355473_p6 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2547 | 3707 |
| ALF00756.1 | KT355473_p1 | hypothetical protein | phrog_9475 | unknown function | unknown function | 1 | 43 | 348 |
| ALF00769.1 | KT355473_p13 | tape measure protein | phrog_3981 | tail length tape measure protein | tail | 1 | 7282 | 9279 |
| ALF00772.1 | KT355473_p16 | lysin A peptidase domain | phrog_6700 | endolysin | lysis | 1 | 11607 | 12053 |
| ALF00757.1 | KT355473_p2 | hypothetical protein | phrog_17346 | unknown function | unknown function | 1 | 345 | 560 |
| ALF00760.1 | KT355473_p4 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 800 | 2290 |
| ALF00779.1 | KT355473_p23 | helix-turn-helix DNA binding domain protein | phrog_8540 | replication initiation O-like | DNA, RNA and nucleotide metabolism | 1 | 14116 | 14784 |
| ALM23551.1 | KT355473_p3 | hypothetical protein | phrog_10836 | unknown function | unknown function | 1 | 591 | 806 |
| ALF00777.1 | KT355473_p21 | helix-turn-helix DNA binding domain protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 13504 | 13776 |
| ALF00764.1 | KT355473_p8 | head-to-tail connector protein | phrog_5938 | head-tail connector protein | connector | 1 | 5291 | 5647 |
| ALF00773.1 | KT355473_p17 | lysin A amidase domain | phrog_4018 | amidase | lysis | 1 | 12050 | 12691 |
| ALF00770.1 | KT355473_p14 | minor tail protein | phrog_10760 | minor tail protein | tail | 1 | 9273 | 11090 |
| ALF00766.1 | KT355473_p10 | major tail protein | phrog_4574 | major tail protein | tail | 1 | 6014 | 6436 |
| ALF00768.1 | KT355473_p12 | hypothetical protein | phrog_6889 | unknown function | unknown function | 1 | 6821 | 7171 |
| ALF00775.1 | KT355473_p19 | hypothetical protein | phrog_689 | holin | lysis | 1 | 12896 | 13153 |
| ARE89882.1 | KT355473_p26 | HNH endonuclease | phrog_5718 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15266 | 15529 |
| ALF00761.1 | KT355473_p5 | hypothetical protein | phrog_7332 | unknown function | unknown function | 1 | 2292 | 2495 |
| ALF00767.1 | KT355473_p11 | minor tail protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6436 | 6813 |
| ALF00781.1 | KT355473_p25 | hypothetical protein | phrog_10672 | unknown function | unknown function | 1 | 14983 | 15276 |
| ALF00765.1 | KT355473_p9 | hypothetical protein | phrog_6768 | unknown function | unknown function | 1 | 5652 | 6008 |
| ALF00780.1 | KT355473_p24 | hypothetical protein | phrog_10694 | unknown function | unknown function | 1 | 14771 | 14986 |
| ALF00771.1 | KT355473_p15 | hypothetical protein | phrog_10587 | unknown function | unknown function | 1 | 11095 | 11610 |
| ALF00763.1 | KT355473_p7 | capsid maturation protease | phrog_2263 | major head protein | head and packaging | 1 | 3704 | 5287 |
| ALF00776.1 | KT355473_p20 | helix-turn-helix DNA binding protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 13221 | 13475 |
| ALF00778.1 | KT355473_p22 | MerR-like HTH DNA binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 13913 | 14119 |
| ALF00774.1 | KT355473_p18 | hypothetical protein | phrog_9284 | holin | lysis | 1 | 12697 | 12906 |