Genomic map of Arthrobacter phage Sandman (KT355475)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT355475
Definition
Arthrobacter phage Sandman, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Decurrovirus; unclassified Decurrovirus.
DB of origin
PVOG
Length
15630
Host Name
Arthrobacter sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
26
%GC
60.03
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALF00854.1 KT355475_p10 major tail protein phrog_4574 major tail protein tail 1 6088 6510
ALF00868.1 KT355475_p24 hypothetical protein phrog_10694 unknown function unknown function 1 14845 15060
ALF00851.1 KT355475_p7 capsid maturation protease phrog_2263 major head protein head and packaging 1 3778 5361
ALF00862.1 KT355475_p18 hypothetical protein phrog_9284 holin lysis 1 12771 12980
ALF00855.1 KT355475_p11 minor tail protein phrog_5 tail completion or Neck1 protein connector 1 6510 6887
ALF00846.1 KT355475_p2 hypothetical protein singleton unknown function unknown function 1 341 634
ALF00869.1 KT355475_p25 hypothetical protein phrog_10672 unknown function unknown function 1 15057 15350
ALF00852.1 KT355475_p8 head-to-tail connector protein phrog_5938 head-tail connector protein connector 1 5365 5721
ALF00860.1 KT355475_p16 lysin A peptidase domain phrog_6700 endolysin lysis 1 11681 12127
ALF00858.1 KT355475_p14 minor tail protein phrog_10760 minor tail protein tail 1 9350 11164
ALF00866.1 KT355475_p22 MerR-like HTH DNA binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 13960 14193
ALF00867.1 KT355475_p23 hypothetical protein phrog_8540 replication initiation O-like DNA, RNA and nucleotide metabolism 1 14190 14858
ALF00850.1 KT355475_p6 portal protein phrog_12 portal protein head and packaging 1 2621 3781
ALF00865.2 KT355475_p21 XRE-like helix-turn-helix DNA binding protein phrog_3 transcriptional repressor transcription regulation -1 13578 13850
ALF00859.1 KT355475_p15 hypothetical protein phrog_10587 unknown function unknown function 1 11169 11684
ALF00863.1 KT355475_p19 hypothetical protein phrog_689 holin lysis 1 12970 13227
ALF00861.1 KT355475_p17 lysin A amidase domain phrog_4018 amidase lysis 1 12124 12765
ALF00847.1 KT355475_p3 hypothetical protein phrog_10836 unknown function unknown function 1 665 880
ALF00864.2 KT355475_p20 helix-turn-helix DNA binding protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 13295 13549
ALF00857.1 KT355475_p13 tape measure protein phrog_3981 tail length tape measure protein tail 1 7356 9353
ALF00849.1 KT355475_p5 hypothetical protein phrog_7332 unknown function unknown function 1 2366 2569
ALF00853.1 KT355475_p9 hypothetical protein phrog_6768 unknown function unknown function 1 5726 6082
ALF00848.1 KT355475_p4 terminase phrog_9 terminase large subunit head and packaging 1 874 2364
ARE89883.1 KT355475_p26 HNH endonuclease phrog_5718 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15337 15603
ALF00856.1 KT355475_p12 hypothetical protein phrog_6889 unknown function unknown function 1 6895 7245
ALF00845.1 KT355475_p1 hypothetical protein phrog_9475 unknown function unknown function 1 43 351