| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KT365401 |
Definition |
Arthrobacter phage Brent, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Marthavirus; Arthrobacter virus Brent. |
DB of origin |
PVOG |
Length |
49879 |
Host Name |
Arthrobacter sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
74 |
%GC |
63.42 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALF01226.1 | KT365401_p15 | hypothetical protein | phrog_5102 | tail tube protein | tail | 1 | 12024 | 12443 |
| ALF01232.1 | KT365401_p21 | hypothetical protein | phrog_5207 | unknown function | unknown function | 1 | 18489 | 20555 |
| ALF01245.1 | KT365401_p34 | HTH DNA binding protein | phrog_6156 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 30324 | 30557 |
| ALF01214.1 | KT365401_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 1982 | 3427 |
| ALF01261.1 | KT365401_p50 | hypothetical protein | phrog_5352 | unknown function | unknown function | 1 | 38026 | 38331 |
| ALF01285.1 | KT365401_p74 | hypothetical protein | phrog_14419 | unknown function | unknown function | -1 | 49582 | 49803 |
| ALF01270.1 | KT365401_p59 | hypothetical protein | phrog_12474 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 41557 | 41730 |
| ALF01251.1 | KT365401_p40 | endodeoxyribonuclease | phrog_9203 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 33738 | 34244 |
| ALF01228.1 | KT365401_p17 | tapemeasure | phrog_971 | endolysin | lysis | 1 | 13434 | 16064 |
| ALF01266.1 | KT365401_p55 | hypothetical protein | phrog_9184 | unknown function | unknown function | 1 | 40359 | 40649 |
| ALF01268.1 | KT365401_p57 | hypothetical protein | phrog_8873 | unknown function | unknown function | 1 | 40890 | 41213 |
| ALF01219.1 | KT365401_p8 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 7215 | 8108 |
| ALF01237.1 | KT365401_p26 | lysin | phrog_7470 | amidase | lysis | 1 | 23376 | 24986 |
| ALF01250.1 | KT365401_p39 | hypothetical protein | phrog_8936 | unknown function | unknown function | 1 | 33230 | 33781 |
| ALF01278.1 | KT365401_p67 | hypothetical protein | phrog_20803 | unknown function | unknown function | 1 | 45124 | 45357 |
| ALF01274.1 | KT365401_p63 | hypothetical protein | phrog_9132 | unknown function | unknown function | 1 | 43188 | 43652 |
| ALF01262.1 | KT365401_p51 | hypothetical protein | phrog_5352 | unknown function | unknown function | 1 | 38336 | 38629 |
| ALF01249.1 | KT365401_p38 | hypothetical protein | phrog_9073 | unknown function | unknown function | 1 | 32451 | 33233 |
| ALF01269.1 | KT365401_p58 | hypothetical protein | phrog_9045 | unknown function | unknown function | 1 | 41210 | 41560 |
| ALF01229.1 | KT365401_p18 | peptidoglycan-binding protein | phrog_380 | endolysin | lysis | 1 | 16067 | 16732 |
| ALF01227.1 | KT365401_p16 | hypothetical protein | phrog_5088 | tail assembly chaperone | tail | 1 | 12623 | 13210 |
| ALF01282.1 | KT365401_p71 | hypothetical protein | phrog_9278 | unknown function | unknown function | -1 | 47427 | 48068 |
| ALF01272.1 | KT365401_p61 | hypothetical protein | phrog_9225 | unknown function | unknown function | 1 | 41856 | 42800 |
| ALF01273.1 | KT365401_p62 | hypothetical protein | phrog_9283 | unknown function | unknown function | 1 | 42793 | 43191 |
| ALF01258.1 | KT365401_p47 | hypothetical protein | phrog_7314 | unknown function | unknown function | 1 | 36916 | 37317 |
| ALF01276.1 | KT365401_p65 | hypothetical protein | phrog_5264 | unknown function | unknown function | 1 | 43911 | 44552 |
| ALF01213.1 | KT365401_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 471 | 1940 |
| ALF01242.1 | KT365401_p31 | hypothetical protein | phrog_9182 | unknown function | unknown function | 1 | 28183 | 28458 |
| ALF01240.1 | KT365401_p29 | baseplate J-like protein | phrog_6 | baseplate wedge subunit | tail | 1 | 25723 | 26853 |
| ALF01277.1 | KT365401_p66 | DNA binding protein | phrog_620 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 44549 | 45127 |
| ALF01260.1 | KT365401_p49 | hypothetical protein | phrog_10565 | unknown function | unknown function | 1 | 37764 | 37997 |
| ALF01246.1 | KT365401_p35 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30565 | 31143 |
| ALF01265.1 | KT365401_p54 | hypothetical protein | phrog_9070 | unknown function | unknown function | 1 | 40099 | 40362 |
| ALF01224.1 | KT365401_p13 | hypothetical protein | phrog_9144 | unknown function | unknown function | 1 | 10318 | 10557 |
| ALF01223.1 | KT365401_p12 | hypothetical protein | phrog_5178 | unknown function | unknown function | 1 | 9653 | 10264 |
| ALF01217.1 | KT365401_p6 | scaffolding protein | phrog_3894 | head maturation protease | head and packaging | 1 | 5617 | 6768 |
| ALF01259.1 | KT365401_p48 | hypothetical protein | phrog_8872 | unknown function | unknown function | 1 | 37314 | 37607 |
| ALF01252.1 | KT365401_p41 | hypothetical protein | phrog_13477 | unknown function | unknown function | 1 | 34289 | 34651 |
| ALF01275.1 | KT365401_p64 | hypothetical protein | phrog_15185 | unknown function | unknown function | 1 | 43649 | 43828 |
| ALF01231.1 | KT365401_p20 | hypothetical protein | phrog_5161 | unknown function | unknown function | 1 | 18082 | 18492 |
| ALF01236.1 | KT365401_p25 | hypothetical protein | phrog_5480 | unknown function | unknown function | 1 | 22975 | 23376 |
| ALF01243.1 | KT365401_p32 | exonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28455 | 29483 |
| ALF01239.1 | KT365401_p28 | tail lysozyme | phrog_5026 | baseplate protein | tail | 1 | 25398 | 25730 |
| ALF01216.1 | KT365401_p5 | hypothetical protein | phrog_3585 | immunity protein | other | 1 | 5178 | 5459 |
| ALF01220.1 | KT365401_p9 | hypothetical protein | phrog_9354 | unknown function | unknown function | 1 | 8114 | 8671 |
| ALF01225.1 | KT365401_p14 | tail sheath | phrog_23 | tail sheath | tail | 1 | 10560 | 12008 |
| ALF01254.1 | KT365401_p43 | hypothetical protein | phrog_9520 | unknown function | unknown function | 1 | 34934 | 35713 |
| ALF01255.1 | KT365401_p44 | hypothetical protein | phrog_8957 | unknown function | unknown function | 1 | 35710 | 36162 |
| ALF01253.1 | KT365401_p42 | hypothetical protein | phrog_12937 | unknown function | unknown function | 1 | 34704 | 34937 |
| ALF01234.1 | KT365401_p23 | hypothetical protein | phrog_4565 | unknown function | unknown function | 1 | 22473 | 22760 |
| ALF01271.1 | KT365401_p60 | HTH DNA binding protein | phrog_7351 | unknown function | unknown function | 1 | 41735 | 41863 |
| ALF01241.1 | KT365401_p30 | hypothetical protein | phrog_9229 | tail protein | tail | 1 | 26853 | 28130 |
| ALF01218.1 | KT365401_p7 | hypothetical protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 6810 | 7196 |
| ALF01212.1 | KT365401_p1 | HTH DNA binding protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 25 | 474 |
| ALF01233.1 | KT365401_p22 | hypothetical protein | phrog_5231 | unknown function | unknown function | 1 | 20617 | 22473 |
| ALF01222.1 | KT365401_p11 | head-tail connector | phrog_26 | tail completion or Neck1 protein | connector | 1 | 9186 | 9650 |
| ALF01247.1 | KT365401_p36 | HTH DNA binding protein | phrog_7061 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31380 | 31598 |
| ALF01264.1 | KT365401_p53 | hypothetical protein | phrog_9308 | unknown function | unknown function | 1 | 39143 | 40102 |
| ALF01256.1 | KT365401_p45 | hypothetical protein | phrog_9025 | unknown function | unknown function | 1 | 36162 | 36671 |
| ALF01221.1 | KT365401_p10 | hypothetical protein | phrog_5280 | unknown function | unknown function | 1 | 8677 | 9186 |
| ALF01263.1 | KT365401_p52 | hypothetical protein | phrog_9121 | unknown function | unknown function | 1 | 38686 | 39060 |
| ALF01244.1 | KT365401_p33 | RecT-like recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 29486 | 30331 |
| ALF01215.1 | KT365401_p4 | hypothetical protein | phrog_595 | head maturation protease | head and packaging | 1 | 3427 | 5181 |
| ALF01235.1 | KT365401_p24 | hypothetical protein | phrog_5303 | unknown function | unknown function | 1 | 22757 | 22975 |
| ALF01283.1 | KT365401_p72 | hypothetical protein | phrog_12308 | unknown function | unknown function | -1 | 48141 | 48356 |
| ALF01284.1 | KT365401_p73 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 48494 | 49498 |
| ALF01230.1 | KT365401_p19 | peptidoglycan hydrolase | phrog_52 | tail protein | tail | 1 | 16732 | 18078 |
| ALF01281.1 | KT365401_p70 | DNA polymerase III subunit beta | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 46082 | 47353 |
| ALF01248.1 | KT365401_p37 | HTH DNA binding protein | phrog_8064 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 31595 | 32149 |
| ALF01267.1 | KT365401_p56 | hypothetical protein | phrog_9753 | unknown function | unknown function | 1 | 40640 | 40861 |
| ALF01280.1 | KT365401_p69 | AlpA-like DNA binding protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 45731 | 46039 |
| ALF01257.1 | KT365401_p46 | hypothetical protein | phrog_17404 | unknown function | unknown function | 1 | 36668 | 36919 |
| ALF01279.1 | KT365401_p68 | hypothetical protein | phrog_9461 | unknown function | unknown function | 1 | 45350 | 45589 |
| ALF01238.1 | KT365401_p27 | hypothetical protein | phrog_4316 | unknown function | unknown function | 1 | 24986 | 25354 |