| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KT365402 |
Definition |
Mycobacterium phage Tres, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Rosebushvirus; Mycobacterium virus Rosebush. |
DB of origin |
PVOG |
Length |
67349 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
68.93 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALF01331.1 | KT365402_p46 | hypothetical protein | phrog_636 | unknown function | unknown function | -1 | 39932 | 40696 |
| ALF01368.1 | KT365402_p83 | hypothetical protein | phrog_7394 | unknown function | unknown function | -1 | 62748 | 62969 |
| ALF01307.1 | KT365402_p22 | hypothetical protein | phrog_7051 | unknown function | unknown function | -1 | 18715 | 18828 |
| ALF01332.1 | KT365402_p47 | lysin A | phrog_317 | endolysin | lysis | 1 | 40804 | 42303 |
| ALF01333.1 | KT365402_p48 | hypothetical protein | phrog_526 | holin | lysis | 1 | 42303 | 42836 |
| ALF01311.1 | KT365402_p26 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 20481 | 20834 |
| ALF01352.1 | KT365402_p67 | hypothetical protein | phrog_1031 | unknown function | unknown function | 1 | 56718 | 57251 |
| ALF01293.1 | KT365402_p8 | hypothetical protein | phrog_5935 | unknown function | unknown function | -1 | 5921 | 6391 |
| ALF01303.1 | KT365402_p18 | hypothetical protein | phrog_2272 | unknown function | unknown function | 1 | 16136 | 16678 |
| ALF01320.1 | KT365402_p35 | hypothetical protein | phrog_948 | unknown function | unknown function | 1 | 34283 | 34672 |
| ALF01334.1 | KT365402_p49 | hypothetical protein | phrog_870 | unknown function | unknown function | -1 | 42954 | 43478 |
| ALF01339.1 | KT365402_p54 | hypothetical protein | phrog_1371 | unknown function | unknown function | -1 | 47141 | 47632 |
| ALF01341.1 | KT365402_p56 | hypothetical protein | phrog_2526 | unknown function | unknown function | -1 | 50498 | 50662 |
| ALF01313.1 | KT365402_p28 | hypothetical protein | phrog_6941 | unknown function | unknown function | 1 | 21318 | 21803 |
| ALF01317.1 | KT365402_p32 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 29968 | 32688 |
| ALF01319.1 | KT365402_p34 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 33885 | 34274 |
| ALF01364.1 | KT365402_p79 | hypothetical protein | phrog_7479 | unknown function | unknown function | -1 | 61401 | 61826 |
| ALF01344.1 | KT365402_p59 | hypothetical protein | phrog_993 | unknown function | unknown function | -1 | 52868 | 53356 |
| ALF01302.1 | KT365402_p17 | hypothetical protein | phrog_970 | unknown function | unknown function | 1 | 15350 | 16099 |
| ALF01353.1 | KT365402_p68 | hypothetical protein | phrog_7186 | unknown function | unknown function | 1 | 57292 | 57675 |
| ALF01329.1 | KT365402_p44 | HTH DNA binding protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39231 | 39437 |
| ALF01286.1 | KT365402_p1 | DNA binding protein | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 1 | 792 |
| ALF01363.1 | KT365402_p78 | hypothetical protein | phrog_7525 | unknown function | unknown function | -1 | 61036 | 61353 |
| ALF01361.1 | KT365402_p76 | hypothetical protein | phrog_7367 | unknown function | unknown function | -1 | 60319 | 60630 |
| ALF01306.1 | KT365402_p21 | major tail subunit | phrog_792 | major tail protein | tail | 1 | 17576 | 18655 |
| ALF01338.1 | KT365402_p53 | hypothetical protein | phrog_3892 | unknown function | unknown function | -1 | 46806 | 47141 |
| ALF01290.1 | KT365402_p5 | 7-cyano-7-deazaguanosine | phrog_2076 | QueE-like radical SAM domain | moron, auxiliary metabolic gene and host takeover | 1 | 2958 | 3671 |
| ALF01362.1 | KT365402_p77 | hypothetical protein | phrog_8341 | unknown function | unknown function | -1 | 60693 | 60938 |
| ALF01323.1 | KT365402_p38 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 35474 | 36073 |
| ALF01318.1 | KT365402_p33 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 32691 | 33854 |
| ALF01309.1 | KT365402_p24 | hypothetical protein | phrog_783 | head-tail adaptor | connector | 1 | 19130 | 19915 |
| ALF01325.1 | KT365402_p40 | hypothetical protein | phrog_915 | unknown function | unknown function | 1 | 37414 | 37770 |
| ALF01375.1 | KT365402_p90 | hypothetical protein | phrog_9162 | unknown function | unknown function | -1 | 65769 | 66128 |
| ALF01360.1 | KT365402_p75 | hypothetical protein | phrog_7463 | unknown function | unknown function | -1 | 60011 | 60322 |
| ALF01369.1 | KT365402_p84 | hypothetical protein | phrog_1010 | unknown function | unknown function | -1 | 63079 | 63660 |
| ALF01351.1 | KT365402_p66 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 56063 | 56716 |
| ALF01301.1 | KT365402_p16 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 14532 | 15350 |
| ALF01314.1 | KT365402_p29 | tapemeasure | phrog_934 | tail length tape measure protein | tail | 1 | 21829 | 27474 |
| ALF01358.1 | KT365402_p73 | hypothetical protein | phrog_7876 | unknown function | unknown function | -1 | 59227 | 59742 |
| ALF01304.1 | KT365402_p19 | hypothetical protein | phrog_2344 | unknown function | unknown function | 1 | 16675 | 17157 |
| ALF01355.1 | KT365402_p70 | HNH endonuclease | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 58616 | 58918 |
| ALF01371.1 | KT365402_p86 | hypothetical protein | phrog_2972 | unknown function | unknown function | -1 | 64833 | 65135 |
| ALF01342.1 | KT365402_p57 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 50665 | 52494 |
| ALF01287.1 | KT365402_p2 | queuine tRNA-ribosyltransferase | phrog_7068 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 789 | 1829 |
| ALF01346.1 | KT365402_p61 | hypothetical protein | phrog_982 | unknown function | unknown function | -1 | 54046 | 54306 |
| ALF01373.1 | KT365402_p88 | hypothetical protein | phrog_8227 | unknown function | unknown function | -1 | 65306 | 65443 |
| ALF01359.1 | KT365402_p74 | hypothetical protein | phrog_8177 | unknown function | unknown function | -1 | 59736 | 60014 |
| ALF01326.1 | KT365402_p41 | hypothetical protein | phrog_941 | unknown function | unknown function | 1 | 37731 | 38096 |
| ALF01321.1 | KT365402_p36 | hypothetical protein | phrog_282 | unknown function | unknown function | 1 | 34684 | 35328 |
| ALF01289.1 | KT365402_p4 | 6-pyruvoyl tetrahydropterin synthase | phrog_2389 | QueD-like 6-pyruvoyl-tetrahydropterin synthase | moron, auxiliary metabolic gene and host takeover | 1 | 2530 | 2961 |
| ALF01356.1 | KT365402_p71 | hypothetical protein | phrog_4461 | unknown function | unknown function | -1 | 58905 | 59009 |
| ALF01376.1 | KT365402_p91 | hypothetical protein | phrog_6718 | unknown function | unknown function | -1 | 66131 | 66322 |
| ALF01299.1 | KT365402_p14 | hypothetical protein | phrog_2069 | unknown function | unknown function | 1 | 12064 | 12237 |
| ALF01367.1 | KT365402_p82 | hypothetical protein | phrog_6719 | unknown function | unknown function | -1 | 62188 | 62682 |
| ALF01330.1 | KT365402_p45 | HTH DNA binding protein | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39468 | 39857 |
| ALF01322.1 | KT365402_p37 | hypothetical protein | phrog_8248 | unknown function | unknown function | 1 | 35325 | 35477 |
| ALF01292.1 | KT365402_p7 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 4230 | 5924 |
| ALF01328.1 | KT365402_p43 | hydrolase | phrog_2804 | virion structural protein | head and packaging | 1 | 38539 | 39234 |
| ALF01312.1 | KT365402_p27 | tail protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20834 | 21262 |
| ALF01308.1 | KT365402_p23 | hypothetical protein | phrog_1318 | unknown function | unknown function | -1 | 18828 | 19019 |
| ALF01366.1 | KT365402_p81 | hypothetical protein | phrog_1933 | unknown function | unknown function | -1 | 61979 | 62191 |
| ALF01315.1 | KT365402_p30 | minor tail protein | phrog_838 | unknown function | unknown function | 1 | 27483 | 28919 |
| ALF01340.1 | KT365402_p55 | primase/helicase | phrog_906 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 47697 | 50453 |
| ALF01300.1 | KT365402_p15 | major capsid protein | phrog_777 | major head protein | head and packaging | 1 | 12411 | 14438 |
| ALF01348.1 | KT365402_p63 | hypothetical protein | phrog_996 | unknown function | unknown function | 1 | 54722 | 55423 |
| ALF01310.1 | KT365402_p25 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 19912 | 20472 |
| ALF01349.1 | KT365402_p64 | replication regulatory protein | phrog_1016 | unknown function | unknown function | 1 | 55433 | 55693 |
| ALF01377.1 | KT365402_p92 | hypothetical protein | phrog_7435 | unknown function | unknown function | -1 | 66418 | 67185 |
| ALF01324.1 | KT365402_p39 | hypothetical protein | phrog_3329 | unknown function | unknown function | 1 | 36070 | 37383 |
| ALF01337.1 | KT365402_p52 | hypothetical protein | phrog_7912 | unknown function | unknown function | -1 | 46643 | 46804 |
| ALF01357.1 | KT365402_p72 | hypothetical protein | phrog_2089 | unknown function | unknown function | -1 | 59006 | 59230 |
| ALF01305.1 | KT365402_p20 | DNA binding protein | phrog_2525 | unknown function | unknown function | 1 | 17154 | 17486 |
| ALF01354.1 | KT365402_p69 | DNA binding protein | phrog_928 | unknown function | unknown function | 1 | 57672 | 58385 |
| ALF01335.1 | KT365402_p50 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43493 | 44860 |
| ALF01345.1 | KT365402_p60 | hypothetical protein | phrog_3835 | unknown function | unknown function | -1 | 53353 | 53793 |
| ALF01350.1 | KT365402_p65 | hypothetical protein | phrog_7544 | unknown function | unknown function | 1 | 55725 | 56066 |
| ALF01291.1 | KT365402_p6 | GTP cyclohydrolase I | phrog_2197 | GTP cyclohydrolase | other | 1 | 3671 | 4246 |
| ALF01296.1 | KT365402_p11 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 7363 | 7701 |
| ALF01316.1 | KT365402_p31 | minor tail protein | phrog_837 | minor tail protein | tail | 1 | 28922 | 29971 |
| ALF01294.1 | KT365402_p9 | RuvC-like protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6474 | 7049 |
| ALF01298.1 | KT365402_p13 | portal protein | phrog_859 | portal protein | head and packaging | 1 | 9617 | 12064 |
| ALF01295.1 | KT365402_p10 | hypothetical protein | phrog_7710 | unknown function | unknown function | 1 | 7046 | 7366 |
| ALF01343.1 | KT365402_p58 | hypothetical protein | phrog_3025 | unknown function | unknown function | -1 | 52491 | 52874 |
| ALF01374.1 | KT365402_p89 | hypothetical protein | phrog_7256 | unknown function | unknown function | -1 | 65440 | 65772 |
| ALF01347.1 | KT365402_p62 | hypothetical protein | phrog_8754 | unknown function | unknown function | 1 | 54466 | 54735 |
| ALF01297.1 | KT365402_p12 | hypothetical protein | phrog_776 | portal protein | head and packaging | 1 | 7728 | 9617 |
| ALF01327.1 | KT365402_p42 | hypothetical protein | phrog_892 | tail fiber protein | tail | 1 | 38122 | 38538 |
| ALF01336.1 | KT365402_p51 | DNA helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 44857 | 46572 |
| ALF01288.1 | KT365402_p3 | queuosine biosynthesis | phrog_1550 | QueC-like queuosine biosynthesis | moron, auxiliary metabolic gene and host takeover | 1 | 1826 | 2533 |
| ALF01372.1 | KT365402_p87 | hypothetical protein | phrog_7689 | unknown function | unknown function | -1 | 65163 | 65309 |
| ALF01365.1 | KT365402_p80 | hypothetical protein | phrog_8500 | unknown function | unknown function | -1 | 61816 | 61977 |
| ALF01370.1 | KT365402_p85 | hypothetical protein | phrog_1221 | unknown function | unknown function | -1 | 63689 | 64759 |