Genomic map of Mycobacterium phage Ukulele (KT373978)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT373978
Definition
Mycobacterium phage Ukulele, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
PVOG
Length
75114
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
141
%GC
63.01
Number of singletons
2
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALA06359.1 KT373978_p127 hypothetical protein phrog_4547 unknown function unknown function -1 70616 70933
ALA06315.1 KT373978_p83 polynucleotide kinase phrog_505 polynucleotide kinase other 1 52339 53280
ALA06251.1 KT373978_p19 hypothetical protein phrog_5711 head fiber protein head and packaging 1 11637 12110
ALA06272.1 KT373978_p40 hypothetical protein phrog_647 unknown function unknown function -1 33991 34569
ALA06268.1 KT373978_p36 hypothetical protein phrog_726 unknown function unknown function 1 32470 32886
ALA06321.1 KT373978_p89 hypothetical protein phrog_2853 unknown function unknown function 1 56304 56462
ALA06282.1 KT373978_p50 hypothetical protein phrog_2842 unknown function unknown function 1 38279 38518
ALA06341.1 KT373978_p109 hypothetical protein phrog_2965 unknown function unknown function 1 65898 66035
ALA06332.1 KT373978_p100 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61803 62093
ALA06283.1 KT373978_p51 hypothetical protein phrog_950 unknown function unknown function -1 38496 39269
ALA06368.1 KT373978_p136 hypothetical protein phrog_2795 unknown function unknown function -1 73173 73370
ALA06244.1 KT373978_p12 major capsid protein phrog_10 major head protein head and packaging 1 7106 8599
ALA06311.1 KT373978_p79 hypothetical protein phrog_2747 unknown function unknown function 1 51055 51276
ALA06324.1 KT373978_p92 hypothetical protein phrog_2788 unknown function unknown function 1 57360 57695
ALA06292.1 KT373978_p60 hypothetical protein phrog_2221 unknown function unknown function 1 42734 42895
ALA06325.1 KT373978_p93 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 57692 58234
ALA06234.1 KT373978_p2 hypothetical protein phrog_2775 unknown function unknown function 1 557 742
ALA06302.1 KT373978_p70 hypothetical protein phrog_2793 unknown function unknown function 1 47221 47454
ALA06316.1 KT373978_p84 hypothetical protein phrog_2495 unknown function unknown function 1 53387 53755
ALA06319.1 KT373978_p87 hypothetical protein phrog_1590 unknown function unknown function 1 55209 56030
ALA06370.1 KT373978_p138 hypothetical protein phrog_5130 unknown function unknown function -1 73644 73835
ALA06271.1 KT373978_p39 Lsr2 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33557 33943
ALA06293.1 KT373978_p61 hypothetical protein phrog_762 unknown function unknown function 1 42942 43445
ALA06328.1 KT373978_p96 ClpP protease phrog_94 head maturation protease head and packaging 1 60011 60790
ALA06281.1 KT373978_p49 integrase phrog_1 integrase integration and excision 1 37259 38140
ALA06318.1 KT373978_p86 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 53847 55172
ALA06303.1 KT373978_p71 hypothetical protein phrog_289 GTP-binding domain other 1 47451 47864
ALA06336.1 KT373978_p104 hypothetical protein singleton unknown function unknown function 1 63190 63414
ALA06352.1 KT373978_p120 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 68358 68621
ALA06276.1 KT373978_p44 hypothetical protein phrog_2893 unknown function unknown function -1 35415 35651
ALA06245.1 KT373978_p13 head-to-tail connector protein phrog_2796 head-tail connector protein connector 1 8722 8901
ALA06248.1 KT373978_p16 head-to-tail connector protein phrog_2805 minor tail protein tail 1 9814 10194
ALA06304.1 KT373978_p72 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 47861 48178
ALA06348.1 KT373978_p116 hypothetical protein phrog_2296 unknown function unknown function 1 67390 67527
ALA06242.1 KT373978_p10 portal protein phrog_12 portal protein head and packaging 1 4167 5723
ALA06314.1 KT373978_p82 hypothetical protein phrog_2894 unknown function unknown function 1 51990 52184
ALA06258.1 KT373978_p26 minor tail protein phrog_346 minor tail protein tail 1 22042 24438
ALA06299.1 KT373978_p67 hypothetical protein phrog_1389 unknown function unknown function 1 46303 46674
ALA06286.1 KT373978_p54 hypothetical protein phrog_2852 unknown function unknown function 1 40116 40253
ALA06338.1 KT373978_p106 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 63907 64692
ALA06343.1 KT373978_p111 hypothetical protein phrog_2279 unknown function unknown function 1 66188 66400
ALA06309.1 KT373978_p77 hypothetical protein phrog_1091 unknown function unknown function 1 50635 50823
ALA06300.1 KT373978_p68 hypothetical protein phrog_572 unknown function unknown function 1 46671 47045
ALA06342.1 KT373978_p110 hypothetical protein phrog_2755 unknown function unknown function 1 66022 66195
ALA06288.1 KT373978_p56 hypothetical protein phrog_2463 unknown function unknown function 1 41097 41243
ALA06298.1 KT373978_p66 hypothetical protein phrog_2771 unknown function unknown function 1 45836 46306
ALA06354.1 KT373978_p122 hypothetical protein phrog_2942 unknown function unknown function -1 69125 69379
ALA06345.1 KT373978_p113 hypothetical protein phrog_2174 unknown function unknown function 1 66632 67045
ALA06346.1 KT373978_p114 hypothetical protein phrog_2764 unknown function unknown function 1 67042 67209
ALA06267.1 KT373978_p35 lysin B phrog_102 endolysin lysis 1 31616 32473
ALA06339.1 KT373978_p107 hypothetical protein phrog_1941 unknown function unknown function 1 64689 64931
ALA06259.1 KT373978_p27 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 24435 27275
ALA06247.1 KT373978_p15 head-to-tail connector protein phrog_1531 head closure connector 1 9482 9817
ALA06274.1 KT373978_p42 hypothetical protein phrog_1546 unknown function unknown function -1 34865 35251
ALA06333.1 KT373978_p101 hypothetical protein phrog_2846 unknown function unknown function 1 62475 62771
ALA06360.1 KT373978_p128 hypothetical protein phrog_3730 unknown function unknown function -1 70939 71064
ALA06372.1 KT373978_p140 hypothetical protein phrog_2762 unknown function unknown function 1 74322 74543
ALA06280.1 KT373978_p48 hypothetical protein phrog_2847 unknown function unknown function -1 36706 37029
ALA06233.1 KT373978_p1 hypothetical protein phrog_2829 unknown function unknown function 1 267 560
ALA06334.1 KT373978_p102 hypothetical protein phrog_1042 unknown function unknown function 1 62768 63031
ALA06297.1 KT373978_p65 hypothetical protein phrog_2750 unknown function unknown function 1 45525 45836
ALA06277.1 KT373978_p45 hypothetical protein phrog_2702 unknown function unknown function -1 35644 35859
ALA06287.1 KT373978_p55 pentapeptide repeat protein phrog_923 unknown function unknown function 1 40250 41095
ALA06326.1 KT373978_p94 DNA methylase phrog_67 DNA methyltransferase other 1 58344 59462
ALA06306.1 KT373978_p74 hypothetical protein phrog_1882 unknown function unknown function 1 48401 49051
ALA06235.1 KT373978_p3 hypothetical protein phrog_3858 unknown function unknown function 1 739 1032
ALA06364.1 KT373978_p132 hypothetical protein phrog_1438 unknown function unknown function -1 72234 72407
ALA06236.1 KT373978_p4 hypothetical protein phrog_8426 unknown function unknown function 1 1022 1159
ALA06260.1 KT373978_p28 hypothetical protein phrog_553 minor tail protein tail 1 27276 28238
ALA06305.1 KT373978_p73 hypothetical protein phrog_1673 unknown function unknown function 1 48168 48404
ALA06327.1 KT373978_p95 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 59455 59895
ALA06265.1 KT373978_p33 holin phrog_526 holin lysis 1 30905 31288
ALA06252.1 KT373978_p20 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 12159 12692
ALA06351.1 KT373978_p119 hypothetical protein phrog_3016 unknown function unknown function 1 67818 67979
ALA06340.1 KT373978_p108 DNA recombinase phrog_97 UvsX-like recombinase other 1 64939 65901
ALA06243.1 KT373978_p11 hypothetical protein phrog_2753 head maturation protease head and packaging 1 5726 7018
ALA06323.1 KT373978_p91 hypothetical protein phrog_889 unknown function unknown function 1 56915 57358
ALA06290.1 KT373978_p58 hypothetical protein phrog_2744 unknown function unknown function 1 42062 42367
ALA06344.1 KT373978_p112 hypothetical protein phrog_3062 unknown function unknown function 1 66381 66635
ALA06285.1 KT373978_p53 hypothetical protein phrog_3071 unknown function unknown function 1 40021 40119
ALA06254.1 KT373978_p22 tape meaure protein phrog_2723 tail length tape measure protein tail 1 13095 17825
ALA06263.1 KT373978_p31 hypothetical protein phrog_411 unknown function unknown function 1 29041 29325
ALA06361.1 KT373978_p129 hypothetical protein phrog_2287 unknown function unknown function -1 71054 71290
ALA06308.1 KT373978_p76 dsDNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 49376 50638
ALA06269.1 KT373978_p37 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 32893 33138
ALA06310.1 KT373978_p78 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 50820 51080
ALA06237.1 KT373978_p5 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1152 1613
ALA06261.1 KT373978_p29 hypothetical protein phrog_644 unknown function unknown function 1 28308 28736
ALA06240.1 KT373978_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2277 3947
ALA06363.1 KT373978_p131 hypothetical protein phrog_3174 unknown function unknown function -1 71846 72229
ALA06257.1 KT373978_p25 minor tail protein phrog_732 minor tail protein tail 1 21192 22025
ALA06256.1 KT373978_p24 minor tail protein phrog_110 minor tail protein tail 1 19504 21183
ALA06357.1 KT373978_p125 hypothetical protein phrog_1915 unknown function unknown function -1 69812 70270
ALA06289.1 KT373978_p57 hypothetical protein phrog_2800 unknown function unknown function 1 41240 41518
ALA06313.1 KT373978_p81 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 51631 51993
ALA06275.1 KT373978_p43 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 35251 35418
ALA06255.1 KT373978_p23 minor tail protein phrog_106 minor tail protein tail 1 17855 19516
ALA06249.1 KT373978_p17 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 10172 10576
ALA06349.1 KT373978_p117 hypothetical protein phrog_2925 unknown function unknown function 1 67524 67703
ALA06279.1 KT373978_p47 hypothetical protein phrog_2759 unknown function unknown function -1 36024 36419
ALA06278.1 KT373978_p46 hypothetical protein phrog_2815 unknown function unknown function -1 35878 36024
ALA06347.1 KT373978_p115 hypothetical protein phrog_2823 unknown function unknown function 1 67193 67393
ALA06284.1 KT373978_p52 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 39364 39804
ALA06270.1 KT373978_p38 hypothetical protein phrog_9947 Lsr2-like DNA bridging protein DNA, RNA and nucleotide metabolism -1 33375 33554
ALA06322.1 KT373978_p90 hypothetical protein phrog_889 unknown function unknown function 1 56459 56911
ALA06335.1 KT373978_p103 hydrolase singleton unknown function unknown function 1 63042 63314
ALA06266.1 KT373978_p34 hypothetical protein phrog_2424 unknown function unknown function 1 31281 31619
ALA06294.1 KT373978_p62 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 43442 44410
ALA06317.1 KT373978_p85 hypothetical protein phrog_2844 unknown function unknown function 1 53752 53850
ALA06367.1 KT373978_p135 hypothetical protein phrog_2772 unknown function unknown function -1 72916 73176
ALA06238.1 KT373978_p6 hypothetical protein phrog_4101 unknown function unknown function -1 1685 1924
ALA06362.1 KT373978_p130 hypothetical protein phrog_2883 unknown function unknown function -1 71306 71842
ALA06239.1 KT373978_p7 hypothetical protein phrog_2202 unknown function unknown function -1 1924 2232
ALA06369.1 KT373978_p137 hypothetical protein phrog_5970 unknown function unknown function -1 73398 73640
ALA06296.1 KT373978_p64 ERF family ssDNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44810 45532
ALA06264.1 KT373978_p32 lysin A phrog_317 endolysin lysis 1 29399 30901
ALA06320.1 KT373978_p88 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 56027 56287
ALA06262.1 KT373978_p30 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28723 28908
ALA06331.1 KT373978_p99 hypothetical protein phrog_1969 unknown function unknown function 1 61439 61750
ALA06307.1 KT373978_p75 hypothetical protein phrog_572 unknown function unknown function 1 49048 49383
ALA06312.1 KT373978_p80 hypothetical protein phrog_3836 unknown function unknown function 1 51269 51634
ALA06291.1 KT373978_p59 hypothetical protein phrog_2147 unknown function unknown function 1 42501 42734
ALA06365.1 KT373978_p133 hypothetical protein phrog_36359 unknown function unknown function -1 72412 72723
ALA06330.1 KT373978_p98 hypothetical protein phrog_2757 unknown function unknown function 1 61144 61434
ALA06356.1 KT373978_p124 hypothetical protein phrog_3034 unknown function unknown function -1 69447 69815
ALA06353.1 KT373978_p121 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 68618 69007
ALA06273.1 KT373978_p41 hypothetical protein phrog_722 unknown function unknown function -1 34593 34868
ALA06253.1 KT373978_p21 tail assembly chaperone phrog_5940 tail assembly chaperone tail 1 12824 13102
ALA06329.1 KT373978_p97 hypothetical protein phrog_2785 unknown function unknown function 1 60787 61143
ALA06246.1 KT373978_p14 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 8901 9467
ALA06350.1 KT373978_p118 hypothetical protein phrog_2897 unknown function unknown function 1 67703 67834
ALA06250.1 KT373978_p18 major tail protein phrog_476 major tail protein tail 1 10603 11577
ALA06241.1 KT373978_p9 hypothetical protein phrog_2845 unknown function unknown function 1 3959 4180
ALA06295.1 KT373978_p63 hypothetical protein phrog_572 unknown function unknown function 1 44407 44817
ALA06301.1 KT373978_p69 hypothetical protein phrog_1622 unknown function unknown function 1 47045 47218
ALA06358.1 KT373978_p126 hypothetical protein phrog_1587 unknown function unknown function -1 70285 70632
ALA06371.1 KT373978_p139 hypothetical protein phrog_2904 unknown function unknown function 1 73900 74247
ALA06373.1 KT373978_p141 HNH endonuclease phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 74533 74880
ALA06337.1 KT373978_p105 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 63417 63896
ALA06366.1 KT373978_p134 hypothetical protein phrog_14103 unknown function unknown function -1 72720 72905
ALA06355.1 KT373978_p123 hypothetical protein phrog_8201 unknown function unknown function -1 69376 69450