Genomic map of Thiobacimonas phage vB_ThpS-P1 (KT381864)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT381864
Definition
Thiobacimonas phage vB_ThpS-P1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
39591
Host Name
Thiobacimonas profunda
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
66.73
Number of singletons
15
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALF02084.1 KT381864_p45 hypothetical protein phrog_13335 unknown function unknown function -1 33560 33841
ALF02076.1 KT381864_p37 hypothetical protein singleton unknown function unknown function -1 27975 28193
ALF02054.1 KT381864_p15 hypothetical protein phrog_195 head-tail adaptor connector -1 14548 14976
ALF02086.1 KT381864_p47 hypothetical protein singleton unknown function unknown function -1 34317 34751
ALF02051.1 KT381864_p12 hypothetical protein phrog_290 minor tail protein tail -1 13030 13962
ALF02061.1 KT381864_p22 hypothetical protein phrog_113 portal protein head and packaging -1 19306 20946
ALF02071.1 KT381864_p32 N-acetylmuramoyl-L-alanine amidase phrog_1794 amidase lysis -1 25280 26146
ALF02087.1 KT381864_p48 Cro/CI family transcriptional regulator phrog_4 transcriptional repressor transcription regulation 1 35049 35729
ALF02072.1 KT381864_p33 hypothetical protein phrog_836 late transcriptional activator transcription regulation -1 26254 26643
ALF02058.1 KT381864_p19 hypothetical protein phrog_328 head maturation protease head and packaging -1 16807 17850
ALF02078.1 KT381864_p39 hypothetical protein phrog_15963 unknown function unknown function -1 28465 28845
ALF02047.1 KT381864_p8 D-alanyl-D-alanine carboxypeptidase family protein phrog_19487 tail length tape measure protein tail -1 8819 12115
ALF02083.1 KT381864_p44 ParB-like nuclease domain protein phrog_3264 ParB-like partition protein DNA, RNA and nucleotide metabolism -1 32647 33549
ALF02053.1 KT381864_p14 hypothetical protein phrog_209 portal protein head and packaging -1 14117 14548
ALF02067.1 KT381864_p28 hypothetical protein phrog_436 unknown function unknown function -1 23902 24198
ALF02069.1 KT381864_p30 hypothetical protein phrog_25396 unknown function unknown function -1 24548 24865
ALF02065.1 KT381864_p26 hypothetical protein phrog_15183 unknown function unknown function -1 23047 23343
ALF02073.1 KT381864_p34 hypothetical protein phrog_8252 unknown function unknown function -1 26636 26902
ALF02046.1 KT381864_p7 hypothetical protein phrog_384 virion structural protein head and packaging -1 8400 8822
ALF02074.1 KT381864_p35 protein of unknown function DUF1018 phrog_286 unknown function unknown function -1 26899 27342
ALF02081.1 KT381864_p42 hypothetical protein phrog_296 DNA transposition protein integration and excision -1 29760 30530
ALF02066.1 KT381864_p27 terminase small subunit phrog_426 terminase small subunit head and packaging -1 23340 23900
ALF02090.1 KT381864_p51 hypothetical protein singleton unknown function unknown function -1 36581 38005
ALF02077.1 KT381864_p38 hypothetical protein singleton unknown function unknown function -1 28190 28426
ALF02079.1 KT381864_p40 hypothetical protein phrog_2119 unknown function unknown function -1 28838 29209
ALF02057.1 KT381864_p18 hypothetical protein phrog_1731 virion structural protein head and packaging -1 16376 16807
ALF02052.1 KT381864_p13 hypothetical protein singleton unknown function unknown function -1 13959 14120
ALF02040.1 KT381864_p1 hypothetical protein singleton unknown function unknown function -1 172 324
ALF02044.1 KT381864_p5 hypothetical protein singleton unknown function unknown function 1 7367 7759
ALF02064.1 KT381864_p25 hypothetical protein singleton unknown function unknown function -1 22907 23047
ALF02059.1 KT381864_p20 virion morphogenesis protein phrog_26 tail completion or Neck1 protein connector -1 17977 18492
ALF02070.1 KT381864_p31 hypothetical protein phrog_17576 unknown function unknown function -1 24874 25269
ALF02060.1 KT381864_p21 virion morphogenesis protein phrog_220 minor head protein and DNA pilot head and packaging -1 18492 19313
ALF02041.1 KT381864_p2 tail fiber protein singleton unknown function unknown function -1 318 3536
ALF02089.1 KT381864_p50 hypothetical protein singleton unknown function unknown function -1 36373 36549
ALF02048.1 KT381864_p9 hypothetical protein phrog_680 tail length tape measure protein tail -1 12117 12359
ALF02088.1 KT381864_p49 hypothetical protein singleton unknown function unknown function 1 36281 36421
ALF02085.1 KT381864_p46 hypothetical protein singleton unknown function unknown function -1 33838 34320
ALF02045.1 KT381864_p6 hypothetical protein phrog_396 minor tail protein tail -1 7879 8403
ALF02050.1 KT381864_p11 hypothetical protein singleton unknown function unknown function -1 12797 13000
ALF02063.1 KT381864_p24 hypothetical protein singleton unknown function unknown function -1 22465 22725
ALF02068.1 KT381864_p29 hypothetical protein phrog_736 unknown function unknown function -1 24195 24551
ALF02055.1 KT381864_p16 hypothetical protein phrog_27280 unknown function unknown function -1 15069 15455
ALF02082.1 KT381864_p43 hypothetical protein phrog_310 transposase integration and excision -1 30549 32654
ALF02043.1 KT381864_p4 hypothetical protein phrog_329 minor tail protein tail -1 6894 7295
ALF02056.1 KT381864_p17 major capsid protein phrog_371 major head protein head and packaging -1 15467 16360
ALF02049.1 KT381864_p10 hypothetical protein phrog_569 tail length tape measure protein tail -1 12461 12769
ALF02062.1 KT381864_p23 terminase large subunit phrog_2 terminase large subunit head and packaging -1 21056 22468
ALF02080.1 KT381864_p41 hypothetical protein phrog_2030 transcriptional regulator transcription regulation -1 29206 29763
ALF02075.1 KT381864_p36 hypothetical protein phrog_846 unknown function unknown function -1 27358 27978
ALF02091.1 KT381864_p52 hypothetical protein singleton unknown function unknown function -1 37995 38840
ALF02042.1 KT381864_p3 tail component phrog_31 central tail fiber J tail -1 3547 6897