| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KT626047 |
Definition |
Mycobacterium phage Dynamix, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
PVOG |
Length |
50628 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
91 |
%GC |
63.72 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AMD43070.1 | KT626047_p73 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 44333 | 44737 |
| AMD43056.1 | KT626047_p59 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 39502 | 39645 |
| AMD43062.1 | KT626047_p65 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 41471 | 41617 |
| AMD43031.1 | KT626047_p34 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 27882 | 28073 |
| AMD43065.1 | KT626047_p68 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 42228 | 42410 |
| AMD43030.1 | KT626047_p33 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27549 | 27872 |
| AMD43001.1 | KT626047_p4 | tail protein | phrog_1197 | tail protein | tail | 1 | 2004 | 3074 |
| AMD42998.1 | KT626047_p1 | hypothetical protein | phrog_4649 | unknown function | unknown function | 1 | 598 | 750 |
| AMD43073.1 | KT626047_p76 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 45840 | 46109 |
| AMD43054.1 | KT626047_p57 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 39270 | 39434 |
| AMD43087.1 | KT626047_p90 | hypothetical protein | phrog_5419 | unknown function | unknown function | -1 | 49620 | 49949 |
| AMD43034.1 | KT626047_p37 | serine integrase | phrog_95 | integrase | integration and excision | 1 | 29367 | 30950 |
| AMD43026.1 | KT626047_p29 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 23419 | 23766 |
| AMD43040.1 | KT626047_p43 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32187 | 32570 |
| AMD43011.1 | KT626047_p14 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11120 | 11632 |
| AMD43060.1 | KT626047_p63 | NrdH glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 40409 | 40678 |
| AMD43007.1 | KT626047_p10 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 6722 | 7036 |
| AMD43059.1 | KT626047_p62 | hypothetical protein | phrog_15751 | unknown function | unknown function | -1 | 40202 | 40378 |
| AMD43061.1 | KT626047_p64 | hypothetical protein | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40675 | 41484 |
| AMD43012.1 | KT626047_p15 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11642 | 12640 |
| AMD43004.1 | KT626047_p7 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4052 | 4309 |
| AMD43069.1 | KT626047_p72 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 44022 | 44336 |
| AMD43064.1 | KT626047_p67 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 41904 | 42224 |
| AMD43045.1 | KT626047_p48 | hypothetical protein | phrog_2094 | unknown function | unknown function | -1 | 35454 | 35786 |
| AMD43048.1 | KT626047_p51 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36770 | 36910 |
| AMD43044.1 | KT626047_p47 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34928 | 35419 |
| AMD43043.1 | KT626047_p46 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 34667 | 34897 |
| AMD43002.1 | KT626047_p5 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3084 | 3773 |
| AMD43066.1 | KT626047_p69 | DNA methylase | phrog_111 | DNA methyltransferase | other | -1 | 42455 | 42982 |
| AMD43036.1 | KT626047_p39 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 31342 | 31512 |
| AMD43032.1 | KT626047_p35 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28070 | 28879 |
| AMD43076.1 | KT626047_p79 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 46494 | 46661 |
| AMD43035.1 | KT626047_p38 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 31073 | 31345 |
| AMD43028.1 | KT626047_p31 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 24135 | 25988 |
| AMD43047.1 | KT626047_p50 | helix-turn-helix DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35962 | 36777 |
| AMD43086.1 | KT626047_p89 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 49444 | 49542 |
| AMD43055.1 | KT626047_p58 | hypothetical protein | phrog_5801 | unknown function | unknown function | -1 | 39434 | 39505 |
| AMD43039.1 | KT626047_p42 | hypothetical protein | phrog_9812 | unknown function | unknown function | -1 | 31900 | 32151 |
| AMD43067.1 | KT626047_p70 | hypothetical protein | phrog_5961 | unknown function | unknown function | -1 | 43017 | 43175 |
| AMD43022.1 | KT626047_p25 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18900 | 20957 |
| AMD43016.1 | KT626047_p19 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13773 | 14168 |
| AMD43081.1 | KT626047_p84 | hypothetical protein | phrog_363 | DNA methyltransferase | other | -1 | 47417 | 48097 |
| AMD43075.1 | KT626047_p78 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 46306 | 46494 |
| AMD43014.1 | KT626047_p17 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 12962 | 13411 |
| AMD43038.1 | KT626047_p41 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 31601 | 31903 |
| AMD43082.1 | KT626047_p85 | hypothetical protein | phrog_4958 | unknown function | unknown function | -1 | 48102 | 48386 |
| AMD43003.1 | KT626047_p6 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3784 | 4044 |
| AMD43080.1 | KT626047_p83 | hypothetical protein | phrog_26095 | unknown function | unknown function | -1 | 47115 | 47288 |
| AMD43021.1 | KT626047_p24 | tapemeasure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16399 | 18876 |
| AMD43074.1 | KT626047_p77 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 46106 | 46309 |
| AMD43005.1 | KT626047_p8 | lysin A | phrog_317 | endolysin | lysis | 1 | 4309 | 5742 |
| AMD43017.1 | KT626047_p20 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 14172 | 14618 |
| AMD43018.1 | KT626047_p21 | major tail protein | phrog_117 | major tail protein | tail | 1 | 14627 | 15475 |
| AMD43008.1 | KT626047_p11 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7056 | 8744 |
| AMD43078.1 | KT626047_p81 | hypothetical protein | phrog_9318 | unknown function | unknown function | -1 | 46780 | 46950 |
| AMD43052.1 | KT626047_p55 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38409 | 38930 |
| AMD43013.1 | KT626047_p16 | head-to-tail connector protein | phrog_1857 | head-tail connector protein | connector | 1 | 12726 | 12962 |
| AMD43024.1 | KT626047_p27 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21136 | 22938 |
| AMD43042.1 | KT626047_p45 | hypothetical protein | phrog_6173 | unknown function | unknown function | -1 | 34416 | 34670 |
| AMD43019.1 | KT626047_p23 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15587 | 15964 |
| AMD43058.1 | KT626047_p61 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 40119 | 40205 |
| AMD43006.1 | KT626047_p9 | lysin B | phrog_102 | endolysin | lysis | 1 | 5732 | 6700 |
| AMD43046.1 | KT626047_p49 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35759 | 35965 |
| AMD43015.1 | KT626047_p18 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 13411 | 13773 |
| AMD42999.1 | KT626047_p2 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 747 | 1043 |
| AMD43084.1 | KT626047_p87 | hypothetical protein | phrog_11359 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 48852 | 49088 |
| AMD43033.1 | KT626047_p36 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29000 | 29296 |
| AMD43063.1 | KT626047_p66 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 41614 | 41907 |
| AMD43083.1 | KT626047_p86 | hypothetical protein | phrog_3414 | unknown function | unknown function | -1 | 48438 | 48722 |
| AMD43050.1 | KT626047_p53 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 37679 | 37849 |
| AMD43053.1 | KT626047_p56 | hypothetical protein | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38776 | 39291 |
| AMD43023.1 | KT626047_p26 | minor tail protein | phrog_1543 | minor tail protein | tail | 1 | 20954 | 21136 |
| AMD43079.1 | KT626047_p82 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 46969 | 47118 |
| AMD43009.1 | KT626047_p12 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 8741 | 10183 |
| AMD43068.1 | KT626047_p71 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43205 | 44029 |
| AMD43041.1 | KT626047_p44 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32567 | 34393 |
| AMD43057.1 | KT626047_p60 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39665 | 40132 |
| AMD43077.1 | KT626047_p80 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 46658 | 46783 |
| AMD43037.1 | KT626047_p40 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 31509 | 31604 |
| AMD43051.1 | KT626047_p54 | DNA primase | phrog_1167 | phosphofructokinase | other | -1 | 37846 | 38412 |
| AMD43020.1 | KT626047_p22 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15587 | 16386 |
| AMD43010.1 | KT626047_p13 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10180 | 11061 |
| AMD43027.1 | KT626047_p30 | hypothetical protein | phrog_1397 | unknown function | unknown function | 1 | 23763 | 24110 |
| AMD43000.1 | KT626047_p3 | tail protein | phrog_226 | minor tail protein | tail | 1 | 1078 | 1518 |
| AMD43029.1 | KT626047_p32 | hypothetical protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 25981 | 27459 |
| AMD43071.1 | KT626047_p74 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 44770 | 45282 |
| AMD43088.1 | KT626047_p91 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 50030 | 50284 |
| AMD43025.1 | KT626047_p28 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 22976 | 23422 |
| AMD43049.1 | KT626047_p52 | phosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 36915 | 37682 |
| AMD43072.1 | KT626047_p75 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 45544 | 45843 |
| AMD43085.1 | KT626047_p88 | hypothetical protein | phrog_5542 | unknown function | unknown function | -1 | 49085 | 49447 |