| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KT716399 |
Definition |
Pseudomonas phage POR1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
DB of origin |
PVOG |
Length |
55349 |
Host Name |
Pseudomonas oryzihabitans |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
81 |
%GC |
55.5 |
Number of singletons |
47 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALH46234.1 | KT716399_p29 | pyrophosphatase | phrog_5658 | pyrophosphatase | other | -1 | 24083 | 24541 |
| ALH46260.1 | KT716399_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40047 | 40217 |
| ALH46255.1 | KT716399_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37866 | 38075 |
| ALH46209.1 | KT716399_p4 | prohead protease | phrog_530 | head maturation protease | head and packaging | 1 | 3487 | 4629 |
| ALH46286.1 | KT716399_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54723 | 55331 |
| ALH46272.1 | KT716399_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44308 | 44460 |
| ALH46222.1 | KT716399_p17 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | 1 | 14038 | 14358 |
| ALH46269.1 | KT716399_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43346 | 43690 |
| ALH46284.1 | KT716399_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53908 | 54222 |
| ALH46211.1 | KT716399_p6 | major capsid protein | phrog_264 | major head protein | head and packaging | 1 | 5222 | 6205 |
| ALH46214.1 | KT716399_p9 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 6898 | 7374 |
| ALH46265.1 | KT716399_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41611 | 41847 |
| ALH46278.1 | KT716399_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48336 | 48581 |
| ALH46212.1 | KT716399_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6207 | 6512 |
| ALH46252.1 | KT716399_p46 | hypothetical protein | phrog_1934 | unknown function | unknown function | -1 | 35147 | 35662 |
| ALH46208.1 | KT716399_p3 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 2135 | 3490 |
| ALH46262.1 | KT716399_p57 | basic leucine zipper protein | singleton | unknown function | unknown function | 1 | 40423 | 40728 |
| ALH46257.1 | KT716399_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38602 | 39327 |
| ALH46228.1 | KT716399_p23 | tail collar protein | phrog_19618 | tail collar protein | tail | 1 | 18399 | 19691 |
| ALH46268.1 | KT716399_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42879 | 43148 |
| ALH46279.1 | KT716399_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48583 | 49107 |
| ALH46259.1 | KT716399_p54 | excinuclease | singleton | unknown function | unknown function | 1 | 39709 | 40050 |
| ALH46256.1 | KT716399_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38075 | 38539 |
| ALH46207.1 | KT716399_p2 | large terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 576 | 2123 |
| ALH46280.1 | KT716399_p75 | collagen-like protein | singleton | unknown function | unknown function | 1 | 49294 | 50490 |
| ALH46244.1 | KT716399_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32973 | 33212 |
| ALH46236.1 | KT716399_p31 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24698 | 25099 |
| ALH46248.1 | KT716399_p43 | hypothetical protein | phrog_5856 | unknown function | unknown function | 1 | 34251 | 34433 |
| ALH46232.1 | KT716399_p27 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 21114 | 23099 |
| ALH46226.1 | KT716399_p21 | baseplate component | phrog_6 | baseplate wedge subunit | tail | 1 | 16328 | 17785 |
| ALH46273.1 | KT716399_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44445 | 44678 |
| ALH46216.1 | KT716399_p11 | hypothetical protein | phrog_1876 | unknown function | unknown function | 1 | 7732 | 8226 |
| ALH46249.1 | KT716399_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34430 | 34645 |
| ALH46245.1 | KT716399_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33286 | 33480 |
| ALH46230.1 | KT716399_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20170 | 20544 |
| ALH46220.1 | KT716399_p15 | tape measure protein | phrog_7740 | tail length tape measure protein | tail | 1 | 10797 | 13301 |
| ALH46243.1 | KT716399_p38 | primase/helicase | phrog_3022 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 30392 | 32986 |
| ALH46276.1 | KT716399_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47800 | 47964 |
| ALH46213.1 | KT716399_p8 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 6513 | 6884 |
| ALH46240.1 | KT716399_p35 | ATPase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 28890 | 29573 |
| ALH46266.1 | KT716399_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41826 | 41954 |
| ALH46258.1 | KT716399_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39377 | 39712 |
| ALH46264.1 | KT716399_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40911 | 41528 |
| ALH46235.1 | KT716399_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24546 | 24665 |
| ALH46283.1 | KT716399_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53679 | 53906 |
| ALH46267.1 | KT716399_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41980 | 42705 |
| ALH46254.1 | KT716399_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37698 | 37844 |
| ALH46218.1 | KT716399_p12 | major tail protein | phrog_205 | tail sheath | tail | 1 | 8271 | 9629 |
| ALH46250.1 | KT716399_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34642 | 34833 |
| ALH46227.1 | KT716399_p22 | structural component | phrog_587 | structural protein | head and packaging | 1 | 17787 | 18398 |
| ALH46210.1 | KT716399_p5 | hypothetical protein | phrog_563 | virion structural protein | head and packaging | 1 | 4663 | 5190 |
| ALH46246.1 | KT716399_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33519 | 33911 |
| ALH46270.1 | KT716399_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43693 | 43896 |
| ALH46219.2 | KT716399_p14 | tail assembly protein | phrog_1613 | tail assembly chaperone | tail | 1 | 10106 | 10636 |
| ALH46225.1 | KT716399_p20 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 15967 | 16353 |
| ALH46277.1 | KT716399_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47951 | 48343 |
| ALH46229.1 | KT716399_p24 | SH3 protein | singleton | unknown function | unknown function | 1 | 19752 | 20177 |
| ALH46206.1 | KT716399_p1 | small terminase | singleton | unknown function | unknown function | 1 | 47 | 583 |
| ALH46223.1 | KT716399_p18 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 14355 | 15299 |
| ALH46282.1 | KT716399_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51535 | 53592 |
| ALH46239.1 | KT716399_p34 | hypothetical protein | phrog_2300 | unknown function | unknown function | -1 | 27733 | 28875 |
| ALH46247.1 | KT716399_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34054 | 34239 |
| ALH46263.1 | KT716399_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40732 | 40920 |
| ALH46231.1 | KT716399_p26 | lysozyme | phrog_90 | endolysin | lysis | 1 | 20522 | 21028 |
| ALH46242.1 | KT716399_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30155 | 30376 |
| ALH46221.1 | KT716399_p16 | structural protein | phrog_817 | tail fiber protein | tail | 1 | 13298 | 14035 |
| ALH46281.1 | KT716399_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50487 | 51518 |
| ALH46215.1 | KT716399_p10 | hypothetical protein | phrog_939 | head protein | head and packaging | 1 | 7371 | 7739 |
| ALH46285.1 | KT716399_p80 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 54222 | 54689 |
| ALH46238.1 | KT716399_p33 | nuclease | phrog_1990 | Cas4-domain exonuclease | DNA, RNA and nucleotide metabolism | -1 | 26815 | 27678 |
| ALH46251.1 | KT716399_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35659 | 36504 |
| ALH46233.1 | KT716399_p28 | DNA polymerase beta subunit | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 23096 | 24067 |
| ALH46274.1 | KT716399_p69 | tail collar fibers protein | singleton | unknown function | unknown function | 1 | 44678 | 45046 |
| ALH46253.1 | KT716399_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37321 | 37686 |
| ALH46224.1 | KT716399_p19 | baseplate component protein | phrog_11 | baseplate spike | tail | 1 | 15299 | 15970 |
| ALH46261.1 | KT716399_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40217 | 40423 |
| ALH46217.1 | KT716399_p13 | structural protein | phrog_280 | virion structural protein | head and packaging | 1 | 9645 | 10079 |
| ALH46271.1 | KT716399_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43979 | 44308 |
| ALH46241.1 | KT716399_p36 | hypothetical protein | phrog_2480 | unknown function | unknown function | -1 | 29583 | 29975 |
| ALH46237.1 | KT716399_p32 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 25109 | 26815 |
| ALH46275.1 | KT716399_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45100 | 47721 |