Genomic map of Pseudomonas phage POR1 (KT716399)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT716399
Definition
Pseudomonas phage POR1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
DB of origin
PVOG
Length
55349
Host Name
Pseudomonas oryzihabitans
Host domain
Bacteria
Is prophage?
undef
Number of proteins
81
%GC
55.5
Number of singletons
47
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALH46234.1 KT716399_p29 pyrophosphatase phrog_5658 pyrophosphatase other -1 24083 24541
ALH46260.1 KT716399_p55 hypothetical protein singleton unknown function unknown function 1 40047 40217
ALH46255.1 KT716399_p50 hypothetical protein singleton unknown function unknown function 1 37866 38075
ALH46209.1 KT716399_p4 prohead protease phrog_530 head maturation protease head and packaging 1 3487 4629
ALH46286.1 KT716399_p81 hypothetical protein singleton unknown function unknown function 1 54723 55331
ALH46272.1 KT716399_p67 hypothetical protein singleton unknown function unknown function 1 44308 44460
ALH46222.1 KT716399_p17 hypothetical protein phrog_349 virion structural protein head and packaging 1 14038 14358
ALH46269.1 KT716399_p64 hypothetical protein singleton unknown function unknown function 1 43346 43690
ALH46284.1 KT716399_p79 hypothetical protein singleton unknown function unknown function 1 53908 54222
ALH46211.1 KT716399_p6 major capsid protein phrog_264 major head protein head and packaging 1 5222 6205
ALH46214.1 KT716399_p9 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 6898 7374
ALH46265.1 KT716399_p60 hypothetical protein singleton unknown function unknown function 1 41611 41847
ALH46278.1 KT716399_p73 hypothetical protein singleton unknown function unknown function 1 48336 48581
ALH46212.1 KT716399_p7 hypothetical protein singleton unknown function unknown function 1 6207 6512
ALH46252.1 KT716399_p46 hypothetical protein phrog_1934 unknown function unknown function -1 35147 35662
ALH46208.1 KT716399_p3 portal protein phrog_146 portal protein head and packaging 1 2135 3490
ALH46262.1 KT716399_p57 basic leucine zipper protein singleton unknown function unknown function 1 40423 40728
ALH46257.1 KT716399_p52 hypothetical protein singleton unknown function unknown function 1 38602 39327
ALH46228.1 KT716399_p23 tail collar protein phrog_19618 tail collar protein tail 1 18399 19691
ALH46268.1 KT716399_p63 hypothetical protein singleton unknown function unknown function 1 42879 43148
ALH46279.1 KT716399_p74 hypothetical protein singleton unknown function unknown function 1 48583 49107
ALH46259.1 KT716399_p54 excinuclease singleton unknown function unknown function 1 39709 40050
ALH46256.1 KT716399_p51 hypothetical protein singleton unknown function unknown function 1 38075 38539
ALH46207.1 KT716399_p2 large terminase phrog_38 terminase large subunit head and packaging 1 576 2123
ALH46280.1 KT716399_p75 collagen-like protein singleton unknown function unknown function 1 49294 50490
ALH46244.1 KT716399_p39 hypothetical protein singleton unknown function unknown function 1 32973 33212
ALH46236.1 KT716399_p31 hypothetical protein singleton unknown function unknown function -1 24698 25099
ALH46248.1 KT716399_p43 hypothetical protein phrog_5856 unknown function unknown function 1 34251 34433
ALH46232.1 KT716399_p27 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 21114 23099
ALH46226.1 KT716399_p21 baseplate component phrog_6 baseplate wedge subunit tail 1 16328 17785
ALH46273.1 KT716399_p68 hypothetical protein singleton unknown function unknown function 1 44445 44678
ALH46216.1 KT716399_p11 hypothetical protein phrog_1876 unknown function unknown function 1 7732 8226
ALH46249.1 KT716399_p44 hypothetical protein singleton unknown function unknown function 1 34430 34645
ALH46245.1 KT716399_p40 hypothetical protein singleton unknown function unknown function 1 33286 33480
ALH46230.1 KT716399_p25 hypothetical protein singleton unknown function unknown function 1 20170 20544
ALH46220.1 KT716399_p15 tape measure protein phrog_7740 tail length tape measure protein tail 1 10797 13301
ALH46243.1 KT716399_p38 primase/helicase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 30392 32986
ALH46276.1 KT716399_p71 hypothetical protein singleton unknown function unknown function 1 47800 47964
ALH46213.1 KT716399_p8 hypothetical protein phrog_302 virion structural protein head and packaging 1 6513 6884
ALH46240.1 KT716399_p35 ATPase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 28890 29573
ALH46266.1 KT716399_p61 hypothetical protein singleton unknown function unknown function 1 41826 41954
ALH46258.1 KT716399_p53 hypothetical protein singleton unknown function unknown function 1 39377 39712
ALH46264.1 KT716399_p59 hypothetical protein singleton unknown function unknown function 1 40911 41528
ALH46235.1 KT716399_p30 hypothetical protein singleton unknown function unknown function -1 24546 24665
ALH46283.1 KT716399_p78 hypothetical protein singleton unknown function unknown function 1 53679 53906
ALH46267.1 KT716399_p62 hypothetical protein singleton unknown function unknown function 1 41980 42705
ALH46254.1 KT716399_p49 hypothetical protein singleton unknown function unknown function 1 37698 37844
ALH46218.1 KT716399_p12 major tail protein phrog_205 tail sheath tail 1 8271 9629
ALH46250.1 KT716399_p45 hypothetical protein singleton unknown function unknown function 1 34642 34833
ALH46227.1 KT716399_p22 structural component phrog_587 structural protein head and packaging 1 17787 18398
ALH46210.1 KT716399_p5 hypothetical protein phrog_563 virion structural protein head and packaging 1 4663 5190
ALH46246.1 KT716399_p41 hypothetical protein singleton unknown function unknown function 1 33519 33911
ALH46270.1 KT716399_p65 hypothetical protein singleton unknown function unknown function 1 43693 43896
ALH46219.2 KT716399_p14 tail assembly protein phrog_1613 tail assembly chaperone tail 1 10106 10636
ALH46225.1 KT716399_p20 hypothetical protein phrog_120 baseplate wedge subunit tail 1 15967 16353
ALH46277.1 KT716399_p72 hypothetical protein singleton unknown function unknown function 1 47951 48343
ALH46229.1 KT716399_p24 SH3 protein singleton unknown function unknown function 1 19752 20177
ALH46206.1 KT716399_p1 small terminase singleton unknown function unknown function 1 47 583
ALH46223.1 KT716399_p18 hypothetical protein phrog_196 baseplate hub tail 1 14355 15299
ALH46282.1 KT716399_p77 hypothetical protein singleton unknown function unknown function 1 51535 53592
ALH46239.1 KT716399_p34 hypothetical protein phrog_2300 unknown function unknown function -1 27733 28875
ALH46247.1 KT716399_p42 hypothetical protein singleton unknown function unknown function 1 34054 34239
ALH46263.1 KT716399_p58 hypothetical protein singleton unknown function unknown function 1 40732 40920
ALH46231.1 KT716399_p26 lysozyme phrog_90 endolysin lysis 1 20522 21028
ALH46242.1 KT716399_p37 hypothetical protein singleton unknown function unknown function 1 30155 30376
ALH46221.1 KT716399_p16 structural protein phrog_817 tail fiber protein tail 1 13298 14035
ALH46281.1 KT716399_p76 hypothetical protein singleton unknown function unknown function 1 50487 51518
ALH46215.1 KT716399_p10 hypothetical protein phrog_939 head protein head and packaging 1 7371 7739
ALH46285.1 KT716399_p80 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 54222 54689
ALH46238.1 KT716399_p33 nuclease phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 26815 27678
ALH46251.1 KT716399_p47 hypothetical protein singleton unknown function unknown function -1 35659 36504
ALH46233.1 KT716399_p28 DNA polymerase beta subunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 23096 24067
ALH46274.1 KT716399_p69 tail collar fibers protein singleton unknown function unknown function 1 44678 45046
ALH46253.1 KT716399_p48 hypothetical protein singleton unknown function unknown function 1 37321 37686
ALH46224.1 KT716399_p19 baseplate component protein phrog_11 baseplate spike tail 1 15299 15970
ALH46261.1 KT716399_p56 hypothetical protein singleton unknown function unknown function 1 40217 40423
ALH46217.1 KT716399_p13 structural protein phrog_280 virion structural protein head and packaging 1 9645 10079
ALH46271.1 KT716399_p66 hypothetical protein singleton unknown function unknown function 1 43979 44308
ALH46241.1 KT716399_p36 hypothetical protein phrog_2480 unknown function unknown function -1 29583 29975
ALH46237.1 KT716399_p32 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 25109 26815
ALH46275.1 KT716399_p70 hypothetical protein singleton unknown function unknown function 1 45100 47721