| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KT717084 |
Definition |
Streptococcus phage 53, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus. |
DB of origin |
NUCCORE |
Length |
34239 |
Host Name |
Streptococcus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
41 |
%GC |
38.9 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALJ99583.1 | KT717084_p1 | small subunit terminase | phrog_83 | terminase small subunit | head and packaging | 1 | 296 | 757 |
| ALJ99592.1 | KT717084_p10 | tail protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7703 | 8125 |
| ALJ99616.1 | KT717084_p34 | primase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28717 | 30240 |
| ALJ99604.1 | KT717084_p22 | lysin | phrog_998 | endolysin | lysis | 1 | 22118 | 22963 |
| ALJ99586.1 | KT717084_p4 | head-tail joining protein | phrog_1142 | unknown function | unknown function | 1 | 3797 | 3976 |
| ALJ99600.1 | KT717084_p18 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 20960 | 21370 |
| ALJ99588.1 | KT717084_p6 | scaffolding protein | phrog_94 | head maturation protease | head and packaging | 1 | 5141 | 5809 |
| ALJ99601.1 | KT717084_p19 | hypothetical protein | phrog_1567 | unknown function | unknown function | 1 | 21390 | 21536 |
| ALJ99623.1 | KT717084_p41 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 33597 | 34145 |
| ALJ99621.1 | KT717084_p39 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 32064 | 32771 |
| ALJ99591.1 | KT717084_p9 | head-tail joining protein | phrog_25 | head closure Hc1 | connector | 1 | 7346 | 7696 |
| ALJ99610.1 | KT717084_p28 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 24783 | 24917 |
| ALJ99585.1 | KT717084_p3 | large subunit terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 1919 | 3793 |
| ALJ99598.1 | KT717084_p16 | host specificity protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 16300 | 18885 |
| ALJ99609.1 | KT717084_p27 | cro-like regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 24328 | 24531 |
| ALJ99603.1 | KT717084_p21 | hypothetical protein | phrog_297 | holin | lysis | 1 | 21874 | 22116 |
| ALJ99593.1 | KT717084_p11 | tail protein | phrog_1217 | tail protein | tail | 1 | 8130 | 8501 |
| ALJ99594.1 | KT717084_p12 | major tail protein | phrog_88 | major tail protein | tail | 1 | 8520 | 9128 |
| ALJ99584.1 | KT717084_p2 | hypothetical protein | phrog_559 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1030 | 1938 |
| ALJ99620.1 | KT717084_p38 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 31759 | 32067 |
| ALJ99595.1 | KT717084_p13 | tail protein | phrog_1346 | tail protein | tail | 1 | 9202 | 9555 |
| ALJ99587.1 | KT717084_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3994 | 5154 |
| ALJ99590.1 | KT717084_p8 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 7032 | 7346 |
| ALJ99619.1 | KT717084_p37 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 31314 | 31790 |
| ALJ99608.1 | KT717084_p26 | hypothetical protein | phrog_26898 | unknown function | unknown function | 1 | 23895 | 24185 |
| ALJ99602.1 | KT717084_p20 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 21554 | 21877 |
| ALJ99612.1 | KT717084_p30 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 25449 | 26150 |
| ALJ99607.1 | KT717084_p25 | cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 23650 | 23877 |
| ALJ99622.1 | KT717084_p40 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 33105 | 33524 |
| ALJ99597.1 | KT717084_p15 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 14741 | 16300 |
| ALJ99613.1 | KT717084_p31 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 26125 | 27456 |
| ALJ99605.1 | KT717084_p23 | hypothetical protein | phrog_11088 | unknown function | unknown function | 1 | 23057 | 23179 |
| ALJ99599.1 | KT717084_p17 | tail protein | phrog_372 | tail protein | tail | 1 | 18886 | 20934 |
| ALJ99596.1 | KT717084_p14 | tail protein | phrog_167 | tail length tape measure protein | tail | 1 | 9774 | 14744 |
| ALJ99618.1 | KT717084_p36 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 31081 | 31329 |
| ALJ99615.1 | KT717084_p33 | replication protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 27921 | 28736 |
| ALJ99617.1 | KT717084_p35 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 30777 | 31100 |
| ALJ99614.1 | KT717084_p32 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 27463 | 27918 |
| ALJ99611.1 | KT717084_p29 | hypothetical protein | phrog_4084 | unknown function | unknown function | 1 | 25119 | 25445 |
| ALJ99589.1 | KT717084_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5824 | 7017 |
| ALJ99606.1 | KT717084_p24 | hypothetical protein | phrog_21229 | unknown function | unknown function | 1 | 23348 | 23443 |