| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KT820175 |
Definition |
Ruegeria phage 45A6, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae. |
DB of origin |
NUCCORE |
Length |
53160 |
Host Name |
Ruegeria mobilis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
61.54 |
Number of singletons |
30 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ANH49095.1 | KT820175_p48 | hypothetical protein | phrog_9953 | major head protein | head and packaging | -1 | 42990 | 43949 |
| ANH49055.1 | KT820175_p8 | hypothetical protein | phrog_2554 | unknown function | unknown function | -1 | 4459 | 6006 |
| ANH49075.1 | KT820175_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15908 | 16090 |
| ANH49080.1 | KT820175_p33 | integrase DNA protein | phrog_1 | integrase | integration and excision | 1 | 17956 | 19146 |
| ANH49065.1 | KT820175_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8960 | 9184 |
| ANH49054.1 | KT820175_p7 | cell division protein FtsK | phrog_4212 | unknown function | unknown function | -1 | 3393 | 4448 |
| ANH49082.1 | KT820175_p35 | hypothetical protein | phrog_12264 | unknown function | unknown function | -1 | 19409 | 19828 |
| ANH49091.1 | KT820175_p44 | hypothetical protein | phrog_5107 | amidase | lysis | -1 | 38960 | 40408 |
| ANH49048.1 | KT820175_p1 | hypothetical protein | phrog_9327 | primosomal protein | DNA, RNA and nucleotide metabolism | -1 | 212 | 1093 |
| ANH49087.1 | KT820175_p40 | hypothetical protein | phrog_10691 | unknown function | unknown function | -1 | 24146 | 35884 |
| ANH49088.1 | KT820175_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36021 | 37442 |
| ANH49089.1 | KT820175_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37442 | 38428 |
| ANH49104.1 | KT820175_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51207 | 51611 |
| ANH49084.1 | KT820175_p37 | protein of unknown function DUF847 | phrog_315 | endolysin | lysis | -1 | 20027 | 20791 |
| ANH49106.1 | KT820175_p59 | hypothetical protein | phrog_309 | terminase small subunit | head and packaging | -1 | 51967 | 52473 |
| ANH49071.1 | KT820175_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11669 | 11956 |
| ANH49073.1 | KT820175_p26 | hypothetical protein | phrog_5928 | unknown function | unknown function | 1 | 13886 | 14236 |
| ANH49070.1 | KT820175_p23 | hypothetical protein | phrog_8389 | unknown function | unknown function | 1 | 11487 | 11669 |
| ANH49083.1 | KT820175_p36 | hypothetical protein | phrog_34283 | unknown function | unknown function | -1 | 19828 | 20034 |
| ANH49052.1 | KT820175_p5 | adenylosuccinate synthetase | phrog_799 | DNA methyltransferase | other | -1 | 2317 | 3003 |
| ANH49050.1 | KT820175_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1293 | 2000 |
| ANH49102.1 | KT820175_p55 | hypothetical protein | phrog_12082 | portal protein | head and packaging | -1 | 47173 | 49395 |
| ANH49105.1 | KT820175_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51608 | 51970 |
| ANH49093.1 | KT820175_p46 | hypothetical protein | phrog_6013 | tail protein | tail | -1 | 41157 | 42107 |
| ANH49092.1 | KT820175_p45 | tail fibers protein | phrog_8763 | tail protein | tail | -1 | 40405 | 41157 |
| ANH49051.1 | KT820175_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1997 | 2320 |
| ANH49099.1 | KT820175_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45936 | 46436 |
| ANH49090.1 | KT820175_p43 | hypothetical protein | phrog_4470 | acyl-CoA N-acyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 38454 | 38999 |
| ANH49081.1 | KT820175_p34 | hypothetical protein | phrog_6664 | unknown function | unknown function | -1 | 19133 | 19405 |
| ANH49069.1 | KT820175_p22 | hypothetical protein | phrog_561 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 10543 | 11490 |
| ANH49053.1 | KT820175_p6 | hypothetical protein | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 3000 | 3389 |
| ANH49098.1 | KT820175_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45691 | 45939 |
| ANH49085.1 | KT820175_p38 | hypothetical protein | phrog_26934 | unknown function | unknown function | -1 | 20803 | 23799 |
| ANH49063.1 | KT820175_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8657 | 8842 |
| ANH49094.1 | KT820175_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42111 | 42926 |
| ANH49107.1 | KT820175_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52492 | 52992 |
| ANH49101.1 | KT820175_p54 | hypothetical protein | phrog_872 | unknown function | unknown function | -1 | 46720 | 47163 |
| ANH49059.1 | KT820175_p12 | hypothetical protein | phrog_4 | transcriptional repressor | transcription regulation | 1 | 7008 | 7592 |
| ANH49076.1 | KT820175_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16087 | 16260 |
| ANH49066.1 | KT820175_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9181 | 9573 |
| ANH49077.1 | KT820175_p30 | hypothetical protein | phrog_7839 | unknown function | unknown function | 1 | 16257 | 16673 |
| ANH49060.1 | KT820175_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7589 | 7792 |
| ANH49068.1 | KT820175_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10322 | 10546 |
| ANH49058.1 | KT820175_p11 | hypothetical protein | singleton | unknown function | unknown function | -1 | 6708 | 6935 |
| ANH49057.1 | KT820175_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 6385 | 6711 |
| ANH49097.1 | KT820175_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45290 | 45688 |
| ANH49074.1 | KT820175_p27 | SWI/SNF family helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 14233 | 15915 |
| ANH49049.1 | KT820175_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1090 | 1296 |
| ANH49056.1 | KT820175_p9 | hypothetical protein | singleton | unknown function | unknown function | -1 | 6006 | 6209 |
| ANH49078.1 | KT820175_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16880 | 17431 |
| ANH49072.1 | KT820175_p25 | C-5 cytosine-specific DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 11922 | 13889 |
| ANH49061.1 | KT820175_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7897 | 8139 |
| ANH49062.1 | KT820175_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8136 | 8660 |
| ANH49079.1 | KT820175_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17428 | 17733 |
| ANH49067.1 | KT820175_p20 | exonuclease | phrog_10477 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 9573 | 10322 |
| ANH49064.1 | KT820175_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8842 | 8967 |
| ANH49096.1 | KT820175_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43982 | 45205 |
| ANH49103.1 | KT820175_p56 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 49389 | 50948 |
| ANH49086.1 | KT820175_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23867 | 24145 |
| ANH49100.1 | KT820175_p53 | hypothetical protein | phrog_419 | unknown function | unknown function | -1 | 46438 | 46716 |