| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KT825490 |
Definition |
Escherichia phage C119, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Rogunavirinae; Rogunavirus; Escherichia virus C119. |
DB of origin |
PVOG |
Length |
47319 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
44.23 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ALJ98905.1 | KT825490_p25 | exodeoxyribonuclease VIII | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 19723 | 20691 |
| ALJ98946.1 | KT825490_p66 | hypothetical protein | phrog_11452 | unknown function | unknown function | 1 | 41318 | 41611 |
| ALJ98899.1 | KT825490_p19 | tail assembly protein I | phrog_32 | tail assembly protein | tail | 1 | 12902 | 13468 |
| ALJ98931.1 | KT825490_p51 | hypothetical protein | phrog_11986 | unknown function | unknown function | -1 | 36354 | 36536 |
| ALJ98939.1 | KT825490_p59 | hypothetical protein | phrog_7327 | unknown function | unknown function | 1 | 39457 | 40017 |
| ALJ98917.1 | KT825490_p37 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 29822 | 29947 |
| ALJ98943.1 | KT825490_p63 | hypothetical protein | phrog_25960 | unknown function | unknown function | 1 | 40708 | 40869 |
| ALJ98935.1 | KT825490_p55 | hypothetical protein | phrog_4448 | unknown function | unknown function | -1 | 37656 | 37895 |
| ALJ98892.1 | KT825490_p12 | tape measure chaperone | phrog_569 | tail length tape measure protein | tail | 1 | 6978 | 7292 |
| ALJ98886.1 | KT825490_p6 | hypothetical protein | phrog_2716 | unknown function | unknown function | 1 | 4374 | 4619 |
| ALJ98895.1 | KT825490_p15 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 10729 | 11079 |
| ALJ98949.1 | KT825490_p69 | hypothetical protein | phrog_10885 | unknown function | unknown function | 1 | 41984 | 42178 |
| ALJ98888.1 | KT825490_p8 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 5062 | 5430 |
| ALJ98953.1 | KT825490_p73 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 44972 | 46246 |
| ALJ98951.1 | KT825490_p71 | terminase small subunit | phrog_606 | terminase small subunit | head and packaging | 1 | 42842 | 43357 |
| ALJ98904.1 | KT825490_p24 | hypothetical protein | phrog_5247 | unknown function | unknown function | 1 | 19525 | 19719 |
| ALJ98924.1 | KT825490_p44 | hypothetical protein | phrog_4788 | unknown function | unknown function | 1 | 32742 | 32915 |
| ALJ98945.1 | KT825490_p65 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 41193 | 41321 |
| ALJ98894.1 | KT825490_p14 | tail length tape measure protein precursor | phrog_24 | tail length tape measure protein | tail | 1 | 7644 | 10697 |
| ALJ98891.1 | KT825490_p11 | major tail protein | phrog_584 | major tail protein | tail | 1 | 6254 | 6904 |
| ALJ98942.1 | KT825490_p62 | hypothetical protein | phrog_12148 | unknown function | unknown function | 1 | 40586 | 40711 |
| ALJ98932.1 | KT825490_p52 | hypothetical protein | phrog_2684 | unknown function | unknown function | -1 | 36747 | 37100 |
| ALJ98903.1 | KT825490_p23 | regulatory protein | phrog_8235 | anti-repressor | transcription regulation | 1 | 18720 | 19451 |
| ALJ98893.1 | KT825490_p13 | tape measure chaperone | phrog_680 | tail length tape measure protein | tail | 1 | 7355 | 7609 |
| ALJ98944.1 | KT825490_p64 | hypothetical protein | phrog_2452 | unknown function | unknown function | 1 | 40869 | 41120 |
| ALJ98883.1 | KT825490_p3 | DNA polymerase I | phrog_5073 | tail fiber protein | tail | 1 | 1246 | 2691 |
| ALJ98889.1 | KT825490_p9 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 5423 | 5851 |
| ALJ98926.1 | KT825490_p46 | endolysin | phrog_7 | endolysin | lysis | 1 | 33243 | 33728 |
| ALJ98940.1 | KT825490_p60 | hypothetical protein | phrog_13316 | unknown function | unknown function | 1 | 40075 | 40305 |
| ALJ98937.1 | KT825490_p57 | hypothetical protein | phrog_14327 | unknown function | unknown function | -1 | 38075 | 38269 |
| ALJ98927.1 | KT825490_p47 | spanin | phrog_1804 | Rz-like spanin | lysis | 1 | 33710 | 34114 |
| ALJ98884.1 | KT825490_p4 | major capsid protein | phrog_264 | major head protein | head and packaging | 1 | 2771 | 3730 |
| ALJ98929.1 | KT825490_p49 | hypothetical protein | phrog_2373 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 34468 | 36057 |
| ALJ98921.1 | KT825490_p41 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 31791 | 32282 |
| ALJ98936.1 | KT825490_p56 | hypothetical protein | phrog_9053 | unknown function | unknown function | -1 | 37906 | 38085 |
| ALJ98897.1 | KT825490_p17 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 11401 | 12165 |
| ALJ98913.1 | KT825490_p33 | hypothetical protein | phrog_824 | unknown function | unknown function | 1 | 28690 | 29079 |
| ALJ98938.1 | KT825490_p58 | hypothetical protein | phrog_4841 | unknown function | unknown function | 1 | 38942 | 39457 |
| ALJ98955.1 | KT825490_p75 | prohead protease | singleton | unknown function | unknown function | 1 | 46960 | 47313 |
| ALJ98918.1 | KT825490_p38 | hypothetical protein | phrog_2817 | unknown function | unknown function | 1 | 29944 | 30183 |
| ALJ98934.1 | KT825490_p54 | hypothetical protein | phrog_4548 | unknown function | unknown function | -1 | 37503 | 37655 |
| ALJ98908.1 | KT825490_p28 | single-stranded DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 21955 | 22377 |
| ALJ98952.1 | KT825490_p72 | terminase large subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 43354 | 44922 |
| ALJ98920.1 | KT825490_p40 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 30589 | 31725 |
| ALJ98911.1 | KT825490_p31 | transcriptional regulator | phrog_2856 | transcriptional regulator | transcription regulation | -1 | 26181 | 26654 |
| ALJ98885.1 | KT825490_p5 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 3801 | 4331 |
| ALJ98930.1 | KT825490_p50 | hypothetical protein | phrog_8121 | unknown function | unknown function | -1 | 36092 | 36271 |
| ALJ98902.1 | KT825490_p22 | lipoprotein | phrog_4281 | unknown function | unknown function | -1 | 17928 | 18248 |
| ALJ98922.1 | KT825490_p42 | hypothetical protein | phrog_7411 | unknown function | unknown function | 1 | 32311 | 32541 |
| ALJ98928.1 | KT825490_p48 | hypothetical protein | phrog_2794 | unknown function | unknown function | -1 | 34128 | 34463 |
| ALJ98919.1 | KT825490_p39 | hypothetical protein | phrog_4596 | unknown function | unknown function | 1 | 30180 | 30437 |
| ALJ98910.1 | KT825490_p30 | alpha replication protein | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 25205 | 26128 |
| ALJ98882.1 | KT825490_p2 | hypothetical protein | phrog_1989 | unknown function | unknown function | 1 | 685 | 1152 |
| ALJ98925.1 | KT825490_p45 | holin | phrog_2877 | holin | lysis | 1 | 33031 | 33246 |
| ALJ98933.1 | KT825490_p53 | hypothetical protein | phrog_12926 | unknown function | unknown function | -1 | 37126 | 37428 |
| ALJ98887.1 | KT825490_p7 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | 1 | 4664 | 5065 |
| ALJ98916.1 | KT825490_p36 | hypothetical protein | phrog_3249 | unknown function | unknown function | 1 | 29547 | 29747 |
| ALJ98915.1 | KT825490_p35 | hypothetical protein | phrog_2676 | unknown function | unknown function | 1 | 29332 | 29550 |
| ALJ98907.1 | KT825490_p27 | endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 21437 | 21931 |
| ALJ98948.1 | KT825490_p68 | fusion protein | phrog_303 | unknown function | unknown function | 1 | 41752 | 41991 |
| ALJ98896.1 | KT825490_p16 | tailspike sialidase | phrog_29402 | unknown function | unknown function | 1 | 11152 | 11367 |
| ALJ98914.1 | KT825490_p34 | hypothetical protein | phrog_6031 | unknown function | unknown function | 1 | 29138 | 29332 |
| ALJ98941.1 | KT825490_p61 | hypothetical protein | phrog_8335 | unknown function | unknown function | 1 | 40356 | 40589 |
| ALJ98901.1 | KT825490_p21 | hypothetical protein | phrog_1265 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 16966 | 17928 |
| ALJ98912.1 | KT825490_p32 | ATP-dependent helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 26696 | 28690 |
| ALJ98881.1 | KT825490_p1 | prohead protease | phrog_36941 | head maturation protease | head and packaging | 1 | 191 | 673 |
| ALJ98900.1 | KT825490_p20 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 13510 | 16935 |
| ALJ98909.1 | KT825490_p29 | tail fiber protein | phrog_4818 | tail fiber protein | tail | -1 | 22409 | 25126 |
| ALJ98950.1 | KT825490_p70 | hypothetical protein | phrog_2919 | unknown function | unknown function | 1 | 42593 | 42742 |
| ALJ98954.1 | KT825490_p74 | head morphogenesis protein | phrog_324 | head morphogenesis | head and packaging | 1 | 46227 | 46970 |
| ALJ98890.1 | KT825490_p10 | minor tail protein | phrog_179 | tail terminator | connector | 1 | 5853 | 6239 |
| ALJ98947.1 | KT825490_p67 | hypothetical protein | phrog_3955 | unknown function | unknown function | 1 | 41615 | 41749 |
| ALJ98906.1 | KT825490_p26 | recombination protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 20748 | 21395 |
| ALJ98923.1 | KT825490_p43 | hypothetical protein | phrog_10052 | unknown function | unknown function | 1 | 32541 | 32729 |
| ALJ98898.1 | KT825490_p18 | minor tail protein | phrog_30 | minor tail protein | tail | 1 | 12175 | 12921 |