Genomic map of Aeromonas phage phiARM81ld (KT898133)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KT898133
Definition
Aeromonas phage phiARM81ld, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
DB of origin
NUCCORE
Length
47457
Host Name
Aeromonas sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
58.6
Number of singletons
18
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALN97522.1 KT898133_p2 large subunit terminase phrog_15 terminase large subunit head and packaging 1 620 2509
ALN97569.1 KT898133_p49 hypothetical protein singleton unknown function unknown function 1 41105 41767
ALN97573.1 KT898133_p53 hypothetical protein singleton unknown function unknown function 1 43397 43513
ALN97524.1 KT898133_p4 portal protein phrog_21 portal protein head and packaging 1 2747 4321
ALN97531.1 KT898133_p11 hypothetical protein phrog_1072 unknown function unknown function 1 8498 9025
ALN97575.1 KT898133_p55 translational regulator Com-like protein singleton unknown function unknown function 1 44000 44215
ALN97576.1 KT898133_p56 adenine-specific DNA methyltransferase phrog_67 DNA methyltransferase other 1 44139 45194
ALN97523.1 KT898133_p3 head-tail connector phrog_75 head-tail adaptor Ad1 connector 1 2547 2750
ALN97557.1 KT898133_p37 LuxR family transcriptional regulator phrog_3282 sigma factor transcription regulation 1 28641 29399
ALN97572.1 KT898133_p52 exonuclease phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism 1 42292 43287
ALN97581.1 KT898133_p61 hypothetical protein singleton unknown function unknown function 1 46559 46996
ALN97533.1 KT898133_p13 baseplate assembly protein W phrog_43 baseplate wedge subunit tail 1 9623 9964
ALN97552.1 KT898133_p32 hypothetical protein phrog_17514 unknown function unknown function -1 27430 27606
ALN97541.1 KT898133_p21 hypothetical protein phrog_166 tail protein tail 1 16637 17263
ALN97536.1 KT898133_p16 tail-collar fiber protein phrog_1780 tail collar fiber protein tail 1 11574 14093
ALN97579.1 KT898133_p59 Rz lysis protein phrog_1327 Rz-like spanin lysis 1 46011 46562
ALN97542.1 KT898133_p22 tail tape measure protein phrog_28 tail length tape measure protein tail 1 17378 20173
ALN97551.1 KT898133_p31 C-5 cytosine-specific DNA methylase phrog_116 DNA methyltransferase other -1 25673 27337
ALN97538.1 KT898133_p18 hypothetical protein singleton unknown function unknown function 1 14452 14619
ALN97566.1 KT898133_p46 HTH_XRE family transcriptional regulator, CI repressor phrog_4 transcriptional repressor transcription regulation -1 39602 40240
ALN97544.1 KT898133_p24 tail protein X phrog_46 baseplate hub tail 1 20643 20849
ALN97550.1 KT898133_p30 hypothetical protein phrog_1672 unknown function unknown function -1 25040 25630
ALN97556.1 KT898133_p36 HTH_XRE-family like protein phrog_18342 transcriptional repressor transcription regulation 1 28277 28651
ALN97564.1 KT898133_p44 hypothetical protein singleton unknown function unknown function 1 35334 35705
ALN97570.1 KT898133_p50 hypothetical protein singleton unknown function unknown function 1 41832 42032
ALN97547.1 KT898133_p27 transposase phrog_506 transposase integration and excision -1 22654 23892
ALN97545.1 KT898133_p25 tail protein phrog_52 tail protein tail 1 20840 21874
ALN97530.1 KT898133_p10 minor tail protein Z phrog_27 tail completion or Neck1 protein connector 1 7860 8489
ALN97559.1 KT898133_p39 hypothetical protein singleton unknown function unknown function -1 29682 30044
ALN97540.1 KT898133_p20 FII tail tube protein phrog_55 head closure connector 1 16095 16577
ALN97548.1 KT898133_p28 hypothetical protein singleton unknown function unknown function -1 23894 24124
ALN97532.1 KT898133_p12 baseplate assembly protein V phrog_11 baseplate spike tail 1 9040 9612
ALN97543.1 KT898133_p23 tail assembly protein phrog_76 tail protein tail 1 20173 20646
ALN97562.1 KT898133_p42 partitioning protein ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism -1 31581 32753
ALN97578.1 KT898133_p58 hypothetical protein phrog_1259 baseplate hub subunit and tail lysozyme tail 1 45535 46014
ALN97535.1 KT898133_p15 tail protein I phrog_48 tail protein tail 1 10960 11577
ALN97521.1 KT898133_p1 small subunit terminase phrog_57 terminase small subunit head and packaging 1 79 657
ALN97577.1 KT898133_p57 holin phrog_126 holin/anti-holin lysis 1 45215 45532
ALN97558.1 KT898133_p38 hypothetical protein singleton unknown function unknown function -1 29421 29600
ALN97554.1 KT898133_p34 hypothetical protein singleton unknown function unknown function -1 27751 27900
ALN97539.1 KT898133_p19 FI major tail sheath protein phrog_23 tail sheath tail 1 14623 16074
ALN97526.1 KT898133_p6 head decoration protein D phrog_49 head decoration head and packaging 1 5636 5980
ALN97525.1 KT898133_p5 head maturation protease C phrog_53 head maturation protease head and packaging 1 4311 5633
ALN97529.1 KT898133_p9 hypothetical protein singleton unknown function unknown function 1 7451 7846
ALN97574.1 KT898133_p54 hypothetical protein singleton unknown function unknown function 1 43525 43719
ALN97546.1 KT898133_p26 hypothetical protein phrog_36303 unknown function unknown function 1 21928 22455
ALN97527.1 KT898133_p7 major capsid protein E phrog_29 major head protein head and packaging 1 5980 7026
ALN97580.1 KT898133_p60 Rz1 lysis protein singleton unknown function unknown function 1 46285 46512
ALN97528.1 KT898133_p8 DNA packaging protein FI phrog_92 DNA packaging chaperone FI head and packaging 1 7084 7458
ALN97568.1 KT898133_p48 antirepressor phrog_4834 CII-like transcriptional activator transcription regulation 1 40533 41108
ALN97565.1 KT898133_p45 primase phrog_4913 replication DNA, RNA and nucleotide metabolism -1 35702 39310
ALN97560.1 KT898133_p40 hypothetical protein singleton unknown function unknown function -1 30055 30210
ALN97563.1 KT898133_p43 protelomerase phrog_5272 unknown function unknown function 1 33360 35249
ALN97549.1 KT898133_p29 exodeoxyribonuclease VIII phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 24426 25043
ALN97553.1 KT898133_p33 hypothetical protein singleton unknown function unknown function -1 27603 27758
ALN97571.1 KT898133_p51 hypothetical protein singleton unknown function unknown function 1 42029 42316
ALN97555.1 KT898133_p35 hypothetical protein singleton unknown function unknown function -1 27958 28119
ALN97567.1 KT898133_p47 Cro DNA-binding transcriptional regulator phrog_409 transcriptional regulator transcription regulation 1 40323 40532
ALN97537.1 KT898133_p17 hypothetical protein phrog_18037 unknown function unknown function 1 14096 14365
ALN97534.1 KT898133_p14 baseplate assembly J-like protein phrog_6 baseplate wedge subunit tail 1 10005 10967
ALN97561.1 KT898133_p41 partitioning protein ParB phrog_1146 ParB-like partition protein DNA, RNA and nucleotide metabolism -1 30271 31584