Genomic map of Salmonella phage fSE1C (KT962832)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Salmonella phage fSE1C, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus; Salmonella virus f18SE; Salmonella phage f18SE.
DB of origin
Host Name
Salmonella enterica
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALN97440.1 KT962832_p1 DNA-binding protein phrog_63 anti-repressor Ant transcription regulation 1 3 638
ALN97465.1 KT962832_p26 hypothetical protein phrog_2359 holin lysis -1 15679 16005
ALN97443.1 KT962832_p4 hypothetical protein phrog_169 tail completion or Neck1 protein connector -1 2255 2650
ALN97490.1 KT962832_p51 hypothetical protein phrog_313 Tail assembly chaperone tail -1 39403 39819
ALN97460.1 KT962832_p21 hypothetical protein phrog_1402 unknown function unknown function -1 14222 14401
ALN97477.1 KT962832_p38 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 24168 24794
ALN97455.1 KT962832_p16 hypothetical protein phrog_6095 amidase lysis 1 9393 10043
ALN97470.1 KT962832_p31 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 18671 18856
ALN97469.1 KT962832_p30 hypothetical protein phrog_625 unknown function unknown function -1 17598 17873
ALN97474.1 KT962832_p35 hypothetical protein phrog_3127 unknown function unknown function 1 21696 22220
ALN97478.1 KT962832_p39 DNA polymerase family A phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 24852 27950
ALN97480.1 KT962832_p41 hypothetical protein phrog_4879 unknown function unknown function 1 28356 28547
ALN97467.1 KT962832_p28 hypothetical protein phrog_4947 unknown function unknown function -1 16480 16851
ALN97484.1 KT962832_p45 tailspike protein phrog_1819 tail spike protein tail -1 30720 32750
ALN97441.1 KT962832_p2 tail protein phrog_290 minor tail protein tail -1 667 1836
ALN97466.1 KT962832_p27 hypothetical protein phrog_1040 peptidase HslV family other -1 16040 16474
ALN97475.1 KT962832_p36 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22289 22810
ALN97481.1 KT962832_p42 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 28544 29968
ALN97461.1 KT962832_p22 hypothetical protein phrog_4684 unknown function unknown function -1 14398 14553
ALN97450.1 KT962832_p11 major capsid protein phrog_247 major head protein head and packaging -1 5059 6108
ALN97452.1 KT962832_p13 hypothetical protein phrog_2536 Rz-like spanin lysis -1 7007 7393
ALN97492.1 KT962832_p53 hypothetical protein phrog_2452 unknown function unknown function 1 41363 41593
ALN97463.1 KT962832_p24 lysozyme phrog_7 endolysin lysis -1 14921 15409
ALN97486.1 KT962832_p47 hypothetical protein phrog_396 minor tail protein tail -1 35698 36213
ALN97451.1 KT962832_p12 scaffold protein phrog_206 head scaffolding protein head and packaging -1 6112 6813
ALN97485.1 KT962832_p46 tail fiber protein phrog_469 tail protein tail -1 32787 35345
ALN97482.1 KT962832_p43 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29965 30450
ALN97476.1 KT962832_p37 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 22794 24086
ALN97445.1 KT962832_p6 hypothetical protein phrog_3614 unknown function unknown function -1 3006 3611
ALN97453.1 KT962832_p14 hypothetical protein phrog_3945 Hoc-like head decoration head and packaging -1 7712 8170
ALN97458.1 KT962832_p19 terminase small subunit protein phrog_3064 terminase head and packaging -1 12816 13361
ALN97456.1 KT962832_p17 portal protein phrog_145 portal protein head and packaging -1 10076 11542
ALN97479.1 KT962832_p40 restriction endonuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 28037 28324
ALN97459.1 KT962832_p20 hypothetical protein phrog_10134 unknown function unknown function -1 13456 13686
ALN97487.1 KT962832_p48 hypothetical protein phrog_384 virion structural protein head and packaging -1 36210 36710
ALN97444.1 KT962832_p5 hypothetical protein phrog_161 head closure Hc1 connector -1 2647 2928
ALN97468.1 KT962832_p29 EaA protein phrog_924 unknown function unknown function -1 17410 17601
ALN97472.1 KT962832_p33 primase-helicase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism 1 19143 21329
ALN97464.1 KT962832_p25 holin-like class I phrog_2508 holin lysis -1 15390 15677
ALN97483.1 KT962832_p44 hypothetical protein phrog_5915 unknown function unknown function 1 30447 30602
ALN97471.1 KT962832_p32 uvsX-like protein phrog_5169 unknown function unknown function 1 18853 19086
ALN97447.1 KT962832_p8 hypothetical protein phrog_4451 unknown function unknown function -1 4127 4315
ALN97488.1 KT962832_p49 tape measure protein phrog_1538 tail length tape measure protein tail -1 36712 39045
ALN97491.1 KT962832_p52 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 40236 41366
ALN97462.1 KT962832_p23 hypothetical protein phrog_2180 unknown function unknown function -1 14550 14735
ALN97473.1 KT962832_p34 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 21344 21562
ALN97448.1 KT962832_p9 major tail protein phrog_4069 Hoc-like head decoration head and packaging -1 4352 4702
ALN97449.1 KT962832_p10 head protein phrog_4366 head fiber protein head and packaging -1 4714 4998
ALN97446.1 KT962832_p7 hypothetical protein phrog_477 head-tail adaptor Ad1 connector -1 3614 4123
ALN97442.1 KT962832_p3 hypothetical protein phrog_179 tail terminator connector -1 1836 2255
ALN97489.1 KT962832_p50 hypothetical protein phrog_4557 unknown function unknown function -1 39038 39397
ALN97454.1 KT962832_p15 head morphogenesis protein phrog_241 head morphogenesis head and packaging -1 8173 9216
ALN97457.1 KT962832_p18 terminase large subunit phrog_2 terminase large subunit head and packaging -1 11555 12826