Genomic map of Lactobacillus phage SA-C12 (KU052488)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU052488
Definition
Lactobacillus phage SA-C12, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Tybeckvirinae; Lenusvirus; Lactobacillus virus SAC12.
DB of origin
NUCCORE
Length
79099
Host Name
Lactobacillus brevis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
121
%GC
37.49
Number of singletons
17
Number of paralogs
6

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALY06840.1 KU052488_p18 structural protein phrog_1217 tail protein tail -1 22367 22744
ALY06886.1 KU052488_p65 hypothetical protein phrog_22698 unknown function unknown function -1 46792 47229
ALY06842.1 KU052488_p20 head-tail joining protein phrog_25 head closure Hc1 connector -1 23189 23611
ALY06935.1 KU052488_p114 hypothetical protein phrog_25186 unknown function unknown function 1 73120 73350
ALY06924.1 KU052488_p103 hypothetical protein phrog_918 unknown function unknown function 1 67102 67347
ALY06907.1 KU052488_p86 hypothetical protein phrog_24710 unknown function unknown function -1 58291 58581
ALY06925.1 KU052488_p104 hypothetical protein phrog_11757 unknown function unknown function 1 67415 67795
ALY06848.1 KU052488_p26 hypothetical protein singleton unknown function unknown function 1 30017 30187
ALY06851.1 KU052488_p29 hypothetical protein singleton unknown function unknown function 1 30814 31008
ALY06881.1 KU052488_p60 hypothetical protein phrog_17627 unknown function unknown function -1 44260 44496
ALY06905.1 KU052488_p84 hypothetical protein phrog_26623 unknown function unknown function -1 57607 58002
ALY06826.1 KU052488_p4 holin phrog_13404 holin lysis -1 2153 2554
ALY06936.1 KU052488_p115 hypothetical protein phrog_22425 unknown function unknown function 1 73331 73570
ALY06930.1 KU052488_p109 lysozyme phrog_14545 unknown function unknown function 1 70201 70524
ALY06857.1 KU052488_p35 hypothetical protein phrog_18814 unknown function unknown function 1 33553 33732
ALY06877.1 KU052488_p56 hypothetical protein phrog_3784 unknown function unknown function -1 42517 42948
ALY06834.1 KU052488_p12 minor structural protein phrog_4798 tail protein tail -1 11034 13418
ALY06897.1 KU052488_p76 hypothetical protein singleton unknown function unknown function 1 50921 51097
ALY06858.1 KU052488_p36 hypothetical protein phrog_9246 unknown function unknown function 1 33744 34097
ALY06933.1 KU052488_p112 hypothetical protein phrog_26567 unknown function unknown function 1 71848 72114
ALY06869.1 KU052488_p48 hypothetical protein phrog_16248 unknown function unknown function -1 39274 39528
ALY06883.1 KU052488_p62 hypothetical protein phrog_25564 unknown function unknown function -1 45148 45396
ALY06838.1 KU052488_p16 tail assembly chaperone phrog_1346 tail protein tail -1 21239 21649
ALY06831.1 KU052488_p9 hypothetical protein phrog_1401 unknown function unknown function -1 5907 6329
ALY06926.1 KU052488_p105 hypothetical protein phrog_19275 unknown function unknown function 1 67797 68129
ALY06860.1 KU052488_p38 NAD-dependent DNA ligase Zn finger domain protein phrog_1494 unknown function unknown function 1 34576 34788
ALY06891.1 KU052488_p70 hypothetical protein phrog_1048 unknown function unknown function -1 48890 49168
ALY06937.1 KU052488_p116 hypothetical protein phrog_22812 unknown function unknown function 1 73614 73910
ALY06854.1 KU052488_p32 hypothetical protein phrog_26511 unknown function unknown function -1 32282 32557
ALY06835.1 KU052488_p13 minor structural protein phrog_202 distal tail protein Dit tail -1 13458 15242
ALY06892.1 KU052488_p71 hypothetical protein phrog_26175 unknown function unknown function -1 49362 49691
ALY06910.1 KU052488_p89 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59621 60259
ALY06824.1 KU052488_p2 hypothetical protein phrog_13351 unknown function unknown function -1 866 1111
ALY06916.1 KU052488_p95 SSB protein phrog_2367 unknown function unknown function 1 61963 62931
ALY06837.1 KU052488_p15 metallo-peptidase family M12B protein phrog_36529 unknown function unknown function -1 21034 21300
ALY06865.1 KU052488_p44 hypothetical protein phrog_28448 unknown function unknown function -1 37429 37815
ALY06828.1 KU052488_p6 glycosylhydrlase LysM domain protein phrog_291 endolysin lysis -1 2840 4225
ALY06845.1 KU052488_p23 major capsid protein phrog_13042 major head protein head and packaging -1 24521 26710
ALY06888.1 KU052488_p67 deoxyribonuclease NucA/NucB phrog_4019 unknown function unknown function -1 47544 47870
ALY06932.1 KU052488_p111 hypothetical protein phrog_4602 transglycosylase other 1 71159 71764
ALY06870.1 KU052488_p49 hypothetical protein phrog_27864 unknown function unknown function -1 39560 39895
ALY06847.1 KU052488_p25 terminase phrog_9 terminase large subunit head and packaging -1 28275 30023
ALY06871.1 KU052488_p50 hypothetical protein singleton unknown function unknown function 1 40081 40335
ALY06912.1 KU052488_p91 hypothetical protein singleton unknown function unknown function -1 60569 60916
ALY06889.1 KU052488_p68 hypothetical protein phrog_98 unknown function unknown function -1 47872 48264
ALY06890.1 KU052488_p69 hypothetical protein singleton unknown function unknown function -1 48517 48801
ALY06887.1 KU052488_p66 hypothetical protein phrog_17195 unknown function unknown function -1 47319 47516
ALY06929.1 KU052488_p108 MazF family toxin-antitoxin system protein phrog_1936 MazF-like growth inhibitor moron, auxiliary metabolic gene and host takeover 1 69839 70204
ALY06903.1 KU052488_p82 hypothetical protein phrog_13292 unknown function unknown function -1 56971 57171
ALY06855.1 KU052488_p33 hypothetical protein singleton unknown function unknown function 1 32652 32915
ALY06856.1 KU052488_p34 hypothetical protein phrog_13887 unknown function unknown function 1 32890 33510
ALY06849.1 KU052488_p27 hypothetical protein singleton unknown function unknown function 1 30156 30428
ALY06829.1 KU052488_p7 tail protein CHO binding protein phrog_5499 host range and adsorption protein moron, auxiliary metabolic gene and host takeover -1 4320 4859
ALY06913.1 KU052488_p92 hypothetical protein phrog_15790 unknown function unknown function 1 60897 61139
ALY06833.1 KU052488_p11 tail fiber protein phrog_7660 tail fiber protein tail -1 6567 11006
ALY06830.1 KU052488_p8 hypothetical protein phrog_4440 tail fiber protein tail -1 4865 5890
ALY06832.1 KU052488_p10 hypothetical protein phrog_11075 unknown function unknown function -1 6344 6574
ALY06941.1 KU052488_p120 DNA polymerase III alpha subunit phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 74927 77530
ALY06879.1 KU052488_p58 hypothetical protein phrog_419 unknown function unknown function -1 43680 44066
ALY06911.1 KU052488_p90 hypothetical protein phrog_26955 unknown function unknown function 1 60296 60697
ALY06825.1 KU052488_p3 site-specific recombinase phage integrase phrog_1 integrase integration and excision -1 1122 2096
ALY06864.1 KU052488_p43 hypothetical protein phrog_27074 unknown function unknown function -1 36961 37416
ALY06901.1 KU052488_p80 hypothetical protein phrog_4680 unknown function unknown function -1 55546 56181
ALY06861.1 KU052488_p40 NADH dehydrogenase domain protein phrog_24500 unknown function unknown function 1 34983 35216
ALY06843.1 KU052488_p21 hypothetical protein phrog_40 head-tail adaptor Ad1 connector -1 23624 23917
ALY06918.1 KU052488_p97 hypothetical protein phrog_23339 unknown function unknown function 1 64015 64218
ALY06902.1 KU052488_p81 deoxynucleoside kinase phrog_761 thymidylate kinase other -1 56267 56971
ALY06876.1 KU052488_p55 hypothetical protein phrog_15366 unknown function unknown function -1 41889 42464
ALY06895.1 KU052488_p74 pseudomurein endo-isopeptidase phrog_7591 unknown function unknown function -1 50165 50446
ALY06850.1 KU052488_p28 hypothetical protein singleton unknown function unknown function -1 30611 30787
ALY06872.1 KU052488_p51 hypothetical protein singleton unknown function unknown function -1 40503 40649
ALY06841.1 KU052488_p19 head-tail joining protein phrog_5 tail completion or Neck1 protein connector -1 22744 23205
ALY06882.1 KU052488_p61 hypothetical protein phrog_22959 unknown function unknown function -1 44447 44767
ALY06906.1 KU052488_p85 hypothetical protein singleton unknown function unknown function -1 58014 58397
ALY06900.1 KU052488_p79 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 53964 55568
ALY06915.1 KU052488_p94 hypothetical protein phrog_14233 unknown function unknown function 1 61564 61896
ALY06943.1 KU052488_p39 hypothetical protein phrog_1494 unknown function unknown function 1 34785 34973
ALY06931.1 KU052488_p110 hypothetical protein phrog_5083 unknown function unknown function 1 70527 71075
ALY06852.1 KU052488_p30 terminase small subunit phrog_83 terminase small subunit head and packaging -1 31072 31575
ALY06921.1 KU052488_p100 nicotinamide mononucleotide transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover 1 65650 66414
ALY06875.1 KU052488_p54 hypothetical protein singleton unknown function unknown function 1 41615 41746
ALY06862.1 KU052488_p41 hypothetical protein phrog_26589 unknown function unknown function -1 36135 36446
ALY06859.1 KU052488_p37 sensor protein phrog_98 unknown function unknown function 1 34124 34579
ALY06914.1 KU052488_p93 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 61142 61579
ALY06942.1 KU052488_p121 DNA-binding protein phrog_20695 DNA binding protein DNA, RNA and nucleotide metabolism 1 77888 79054
ALY06917.1 KU052488_p96 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 62964 64025
ALY06938.1 KU052488_p117 hypothetical protein phrog_14203 unknown function unknown function 1 73914 74201
ALY06846.1 KU052488_p24 portal protein phrog_12 portal protein head and packaging -1 26820 28133
ALY06898.1 KU052488_p77 single-stranded-DNA-specific exonuclease phrog_2484 RecJ-like ssDNA exonuclease DNA, RNA and nucleotide metabolism -1 51180 52925
ALY06866.1 KU052488_p45 hypothetical protein phrog_20607 unknown function unknown function -1 37833 38147
ALY06894.1 KU052488_p73 hypothetical protein phrog_7591 unknown function unknown function -1 49924 50154
ALY06885.1 KU052488_p64 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 45868 46719
ALY06934.1 KU052488_p113 hypothetical protein phrog_22118 unknown function unknown function 1 72264 72575
ALY06927.1 KU052488_p106 methyltransferase phrog_954 DNA methyltransferase other 1 68162 68647
ALY06908.1 KU052488_p87 hypothetical protein singleton unknown function unknown function 1 58762 58968
ALY06940.1 KU052488_p119 TraG-like protein phrog_17034 unknown function unknown function 1 74509 74835
ALY06853.1 KU052488_p31 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism -1 31580 32032
ALY06863.1 KU052488_p42 hypothetical protein phrog_14183 unknown function unknown function -1 36439 36897
ALY06896.1 KU052488_p75 hypothetical protein phrog_24165 unknown function unknown function -1 50448 50966
ALY06923.1 KU052488_p102 NrdH family redoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 66809 67129
ALY06868.1 KU052488_p47 hypothetical protein phrog_8645 unknown function unknown function -1 38962 39210
ALY06844.1 KU052488_p22 hypothetical protein phrog_341 major tail protein tail -1 23952 24401
ALY06899.1 KU052488_p78 hypothetical protein phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 52928 53830
ALY06878.1 KU052488_p57 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 42952 43563
ALY06893.1 KU052488_p72 hypothetical protein phrog_7591 unknown function unknown function -1 49621 49908
ALY06867.1 KU052488_p46 hypothetical protein phrog_10700 unknown function unknown function -1 38308 38625
ALY06939.1 KU052488_p118 hypothetical protein phrog_15801 unknown function unknown function 1 74140 74508
ALY06922.1 KU052488_p101 hypothetical protein singleton unknown function unknown function -1 66530 66748
ALY06904.1 KU052488_p83 hypothetical protein phrog_26884 unknown function unknown function -1 57185 57463
ALY06928.1 KU052488_p107 DNA methylase phrog_116 DNA methyltransferase other 1 68647 69771
ALY06836.1 KU052488_p14 tail tape measure protein phrog_167 tail length tape measure protein tail -1 15301 20961
ALY06880.1 KU052488_p59 hypothetical protein phrog_23755 unknown function unknown function -1 44072 44263
ALY06884.1 KU052488_p63 hypothetical protein phrog_17062 unknown function unknown function -1 45386 45790
ALY06873.1 KU052488_p52 hypothetical protein singleton unknown function unknown function 1 41072 41323
ALY06919.1 KU052488_p98 hypothetical protein phrog_24137 unknown function unknown function 1 64202 64408
ALY06823.1 KU052488_p1 DNA polymerase III alpha subunit singleton unknown function unknown function 1 51 830
ALY06874.1 KU052488_p53 hypothetical protein phrog_38242 unknown function unknown function -1 41176 41517
ALY06827.1 KU052488_p5 holin phrog_1009 unknown function unknown function -1 2541 2837
ALY06909.1 KU052488_p88 hypothetical protein singleton unknown function unknown function -1 58988 59173
ALY06839.1 KU052488_p17 major tail protein phrog_88 major tail protein tail -1 21738 22349
ALY06920.1 KU052488_p99 DNA polymerase phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 64405 65631