Genomic map of Pseudomonas phage vB_PsyM_KIL4 (KU130129)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU130129
Definition
Pseudomonas phage vB_PsyM_KIL4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Flaumdravirus; Pseudomonas virus KIL2.
DB of origin
NUCCORE
Length
92816
Host Name
Pseudomonas syringae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
167
%GC
44.89
Number of singletons
1
Number of paralogs
12

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AMR57820.1 KU130129_p87 hypothetical protein phrog_12336 unknown function unknown function 1 51364 51558
AMR57761.1 KU130129_p28 hypothetical protein phrog_18214 unknown function unknown function -1 9773 10099
AMR57754.1 KU130129_p21 hypothetical protein phrog_2686 unknown function unknown function -1 6070 6540
AMR57817.1 KU130129_p84 hypothetical protein phrog_20015 endonuclease DNA, RNA and nucleotide metabolism 1 50617 50757
AMR57770.1 KU130129_p37 hypothetical protein phrog_11200 unknown function unknown function 1 16505 16630
AMR57765.1 KU130129_p32 phosphate starvation inducible protein phrog_170 PhoH-like phosphate starvation-inducible other -1 12194 12928
AMR57809.1 KU130129_p76 hypothetical protein phrog_5847 holin lysis 1 46555 46806
AMR57834.1 KU130129_p101 hypothetical protein phrog_2544 unknown function unknown function 1 61943 62941
AMR57823.1 KU130129_p90 hypothetical protein phrog_1491 tail fiber protein tail 1 52345 52962
AMR57887.1 KU130129_p154 hypothetical protein phrog_17824 unknown function unknown function 1 87603 87719
AMR57736.1 KU130129_p3 hypothetical protein phrog_18558 unknown function unknown function -1 865 1065
AMR57796.1 KU130129_p63 hypothetical protein phrog_4625 unknown function unknown function 1 33976 34197
AMR57773.1 KU130129_p40 hypothetical protein phrog_17509 unknown function unknown function 1 18851 19696
AMR57875.1 KU130129_p142 hypothetical protein phrog_13040 unknown function unknown function 1 82772 82987
AMR57844.1 KU130129_p111 hypothetical protein phrog_4276 unknown function unknown function 1 67445 67657
AMR57874.1 KU130129_p141 hypothetical protein phrog_14647 unknown function unknown function 1 82515 82775
AMR57813.1 KU130129_p80 hypothetical protein phrog_4172 unknown function unknown function 1 47996 48277
AMR57771.1 KU130129_p38 HNH endonuclease phrog_2255 HNH endonuclease DNA, RNA and nucleotide metabolism 1 17909 18307
AMR57897.1 KU130129_p164 hypothetical protein phrog_18501 unknown function unknown function 1 90934 91122
AMR57767.1 KU130129_p34 hypothetical protein phrog_5019 unknown function unknown function -1 13497 13937
AMR57882.1 KU130129_p149 hypothetical protein phrog_13300 unknown function unknown function 1 86138 86284
AMR57785.1 KU130129_p52 hypothetical protein phrog_4087 unknown function unknown function 1 28406 28978
AMR57838.1 KU130129_p105 hypothetical protein phrog_7029 unknown function unknown function 1 63720 63971
AMR57811.1 KU130129_p78 hypothetical protein phrog_16936 unknown function unknown function 1 47397 47834
AMR57801.1 KU130129_p68 baseplate protein phrog_11 baseplate spike tail 1 38603 39364
AMR57778.1 KU130129_p45 portal protein phrog_1530 DNA methyltransferase other 1 24196 24645
AMR57828.1 KU130129_p95 hypothetical protein phrog_13446 unknown function unknown function 1 54426 54593
AMR57860.1 KU130129_p127 hypothetical protein phrog_17804 unknown function unknown function 1 76622 76792
AMR57849.1 KU130129_p116 hypothetical protein phrog_5046 HNH endonuclease DNA, RNA and nucleotide metabolism 1 69655 70089
AMR57756.1 KU130129_p23 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 7056 8276
AMR57872.1 KU130129_p139 hypothetical protein phrog_13468 unknown function unknown function 1 81588 82064
AMR57869.1 KU130129_p136 hypothetical protein phrog_4317 unknown function unknown function 1 79435 80025
AMR57889.1 KU130129_p156 hypothetical protein phrog_3199 unknown function unknown function 1 88179 88439
AMR57782.1 KU130129_p49 hypothetical protein phrog_1732 unknown function unknown function 1 27097 27579
AMR57737.1 KU130129_p4 hypothetical protein phrog_18078 unknown function unknown function -1 1127 1384
AMR57792.1 KU130129_p59 hypothetical protein phrog_280 virion structural protein head and packaging 1 32180 32683
AMR57750.1 KU130129_p17 hypothetical protein phrog_14326 RNA ligase DNA, RNA and nucleotide metabolism -1 4688 4864
AMR57819.1 KU130129_p86 hypothetical protein phrog_12621 unknown function unknown function 1 51155 51367
AMR57898.1 KU130129_p165 hypothetical protein phrog_22728 unknown function unknown function 1 91189 91362
AMR57853.1 KU130129_p120 ribonucleotide-diphosphate reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 71447 72913
AMR57740.1 KU130129_p7 hypothetical protein phrog_30006 unknown function unknown function -1 1830 2036
AMR57738.1 KU130129_p5 hypothetical protein phrog_18660 unknown function unknown function -1 1386 1625
AMR57763.1 KU130129_p30 antirepressor protein phrog_63 anti-repressor Ant transcription regulation -1 10732 11514
AMR57776.1 KU130129_p43 hypothetical protein phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21645 22181
AMR57786.1 KU130129_p53 hypothetical protein phrog_30933 unknown function unknown function 1 29048 29278
AMR57848.1 KU130129_p115 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 68748 69665
AMR57787.1 KU130129_p54 structural protein phrog_205 tail sheath tail 1 29545 30579
AMR57867.1 KU130129_p134 hypothetical protein phrog_17937 unknown function unknown function 1 78683 79102
AMR57873.1 KU130129_p140 anti-sigma factor phrog_3118 HNH endonuclease DNA, RNA and nucleotide metabolism 1 82126 82518
AMR57745.1 KU130129_p12 hypothetical protein phrog_16170 unknown function unknown function -1 3252 3437
AMR57855.1 KU130129_p122 DNA adenine methyltransferase phrog_5172 unknown function unknown function 1 74739 75542
AMR57774.1 KU130129_p41 hypothetical protein phrog_17443 unknown function unknown function 1 19773 19898
AMR57758.1 KU130129_p25 hypothetical protein phrog_15470 unknown function unknown function -1 8506 8703
AMR57762.1 KU130129_p29 hypothetical protein phrog_3948 unknown function unknown function -1 10401 10667
AMR57832.1 KU130129_p99 hypothetical protein phrog_14269 unknown function unknown function 1 61243 61428
AMR57766.1 KU130129_p33 hypothetical protein phrog_5067 unknown function unknown function -1 13135 13491
AMR57864.1 KU130129_p131 hypothetical protein phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 77584 78093
AMR57779.1 KU130129_p46 hypothetical protein phrog_4103 unknown function unknown function 1 24642 25556
AMR57876.1 KU130129_p143 hypothetical protein phrog_12713 unknown function unknown function 1 82984 83217
AMR57835.1 KU130129_p102 hypothetical protein phrog_2340 endonuclease DNA, RNA and nucleotide metabolism 1 62938 63339
AMR57783.1 KU130129_p50 RNA polymerase phrog_222 tail completion or Neck1 protein connector 1 27563 28030
AMR57784.1 KU130129_p51 hypothetical protein phrog_939 head protein head and packaging 1 28041 28409
AMR57825.1 KU130129_p92 hypothetical protein phrog_12169 unknown function unknown function 1 53765 53986
AMR57885.1 KU130129_p152 hypothetical protein phrog_6261 unknown function unknown function 1 87037 87243
AMR57802.1 KU130129_p69 tail lysozyme phrog_120 baseplate wedge subunit tail 1 39373 39738
AMR57815.1 KU130129_p82 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism -1 48759 49901
AMR57827.1 KU130129_p94 hypothetical protein phrog_12645 unknown function unknown function 1 54088 54429
AMR57861.1 KU130129_p128 hypothetical protein phrog_16351 DNA binding protein DNA, RNA and nucleotide metabolism 1 76785 76922
AMR57808.1 KU130129_p75 endolysin phrog_2860 endolysin head and packaging 1 45981 46544
AMR57757.1 KU130129_p24 hypothetical protein phrog_11656 unknown function unknown function -1 8273 8509
AMR57799.1 KU130129_p66 hypothetical protein phrog_349 virion structural protein head and packaging 1 37336 37677
AMR57883.1 KU130129_p150 hypothetical protein phrog_6140 unknown function unknown function 1 86307 86519
AMR57804.1 KU130129_p71 hypothetical protein phrog_587 structural protein head and packaging 1 41211 41945
AMR57833.1 KU130129_p100 hypothetical protein phrog_10905 unknown function unknown function 1 61487 61867
AMR57890.1 KU130129_p157 hypothetical protein phrog_5336 unknown function unknown function 1 88498 88833
AMR57743.1 KU130129_p10 hypothetical protein phrog_12309 unknown function unknown function -1 2699 2902
AMR57753.1 KU130129_p20 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism -1 5396 6022
AMR57772.1 KU130129_p39 hypothetical protein phrog_4770 unknown function unknown function 1 18585 18854
AMR57841.1 KU130129_p108 HNH endonuclease phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 65524 66081
AMR57895.1 KU130129_p162 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 89898 90386
AMR57768.1 KU130129_p35 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 14371 14937
AMR57842.1 KU130129_p109 exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 66078 66989
AMR57816.1 KU130129_p83 hypothetical protein phrog_18434 unknown function unknown function -1 49918 50223
AMR57847.1 KU130129_p114 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis 1 68002 68577
AMR57830.1 KU130129_p97 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 57506 60760
AMR57831.1 KU130129_p98 hypothetical protein phrog_10599 unknown function unknown function 1 60959 61246
AMR57775.1 KU130129_p42 terminase large subunit phrog_979 terminase large subunit head and packaging 1 20074 21435
AMR57837.1 KU130129_p104 hypothetical protein phrog_17673 unknown function unknown function 1 63535 63723
AMR57846.1 KU130129_p113 hypothetical protein phrog_14002 unknown function unknown function 1 67803 68018
AMR57734.1 KU130129_p1 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism -1 106 627
AMR57840.1 KU130129_p107 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 65049 65531
AMR57880.1 KU130129_p147 hypothetical protein phrog_28912 unknown function unknown function 1 84241 84417
AMR57854.1 KU130129_p121 ribonucleotide-diphosphate reductase alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 72910 74637
AMR57892.1 KU130129_p159 hypothetical protein phrog_11435 unknown function unknown function 1 89007 89429
AMR57755.1 KU130129_p22 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 6530 7081
AMR57742.1 KU130129_p9 hypothetical protein phrog_16192 unknown function unknown function -1 2335 2613
AMR57888.1 KU130129_p155 hypothetical protein phrog_11538 unknown function unknown function 1 87722 88105
AMR57818.1 KU130129_p85 hypothetical protein phrog_3754 unknown function unknown function 1 50757 51158
AMR57879.1 KU130129_p146 hypothetical protein phrog_8790 restriction endonuclease DNA, RNA and nucleotide metabolism 1 83685 84101
AMR57739.1 KU130129_p6 hypothetical protein phrog_17973 unknown function unknown function -1 1627 1833
AMR57822.1 KU130129_p89 hypothetical protein phrog_13035 unknown function unknown function 1 51925 52275
AMR57746.1 KU130129_p13 hypothetical protein phrog_10873 unknown function unknown function -1 3434 3769
AMR57795.1 KU130129_p62 hypothetical protein phrog_1613 tail assembly chaperone tail 1 33590 33952
AMR57839.1 KU130129_p106 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 64028 65062
AMR57851.1 KU130129_p118 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 70453 71106
AMR57856.1 KU130129_p123 hypothetical protein phrog_15563 unknown function unknown function 1 75532 75843
AMR57896.1 KU130129_p163 hypothetical protein phrog_4025 unknown function unknown function 1 90460 90714
AMR57798.1 KU130129_p65 hypothetical protein phrog_817 tail fiber protein tail 1 36562 37326
AMR57850.1 KU130129_p117 thymidylate synthase phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 70082 70474
AMR57789.1 KU130129_p56 hypothetical protein phrog_32358 unknown function unknown function 1 31283 31393
AMR57886.1 KU130129_p153 hypothetical protein phrog_4323 unknown function unknown function 1 87375 87515
AMR57760.1 KU130129_p27 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism -1 9196 9786
AMR57870.1 KU130129_p137 hypothetical protein phrog_2141 unknown function unknown function 1 80037 80984
AMR57769.1 KU130129_p36 hypothetical protein phrog_3900 unknown function unknown function 1 15267 15584
AMR57866.1 KU130129_p133 hypothetical protein phrog_899 unknown function unknown function 1 78404 78664
AMR57852.1 KU130129_p119 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 71103 71444
AMR57747.1 KU130129_p14 hypothetical protein phrog_11764 unknown function unknown function -1 3879 4217
AMR57829.1 KU130129_p96 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 54590 57391
AMR57859.1 KU130129_p126 hypothetical protein phrog_12065 unknown function unknown function 1 76287 76616
AMR57814.1 KU130129_p81 hypothetical protein phrog_3899 unknown function unknown function 1 48287 48610
AMR57744.1 KU130129_p11 hypothetical protein phrog_15766 unknown function unknown function -1 2899 3087
AMR57871.1 KU130129_p138 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 80956 81588
AMR57878.1 KU130129_p145 hypothetical protein phrog_5041 unknown function unknown function 1 83446 83640
AMR57780.1 KU130129_p47 structural protein phrog_49 head decoration head and packaging 1 25582 25968
AMR57824.1 KU130129_p91 hypothetical protein phrog_2529 unknown function unknown function 1 53424 53768
AMR57877.1 KU130129_p144 hypothetical protein phrog_4323 unknown function unknown function 1 83217 83363
AMR57800.1 KU130129_p67 hypothetical protein phrog_196 baseplate hub tail 1 37683 38606
AMR57735.1 KU130129_p2 hypothetical protein phrog_28194 unknown function unknown function -1 757 843
AMR57865.1 KU130129_p132 hypothetical protein singleton unknown function unknown function 1 78119 78394
AMR57812.1 KU130129_p79 hypothetical protein phrog_5388 Rz-like spanin lysis 1 47809 47994
AMR57749.1 KU130129_p16 hypothetical protein phrog_12988 unknown function unknown function -1 4449 4688
AMR57857.1 KU130129_p124 hypothetical protein phrog_18010 unknown function unknown function 1 75917 76090
AMR57806.1 KU130129_p73 hypothetical protein phrog_1795 tail fiber protein tail 1 44055 44474
AMR57881.1 KU130129_p148 hypothetical protein phrog_12785 unknown function unknown function 1 84809 86056
AMR57797.1 KU130129_p64 tape measure protein phrog_991 tail length tape measure protein tail 1 34208 36562
AMR57793.1 KU130129_p60 hypothetical protein phrog_280 virion structural protein head and packaging 1 32693 33226
AMR57759.1 KU130129_p26 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 8700 9206
AMR57894.1 KU130129_p161 hypothetical protein phrog_18035 unknown function unknown function 1 89677 89844
AMR57893.1 KU130129_p160 hypothetical protein phrog_12215 unknown function unknown function 1 89422 89673
AMR57788.1 KU130129_p55 endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 30871 31179
AMR57807.1 KU130129_p74 tail fiber protein phrog_2282 tail fiber protein tail 1 44499 45971
AMR57845.1 KU130129_p112 hypothetical protein phrog_17850 unknown function unknown function 1 67654 67806
AMR57791.1 KU130129_p58 structural protein phrog_280 virion structural protein head and packaging 1 31591 32115
AMR57843.1 KU130129_p110 hypothetical protein phrog_15326 unknown function unknown function 1 67124 67432
AMR57891.1 KU130129_p158 hypothetical protein phrog_18479 unknown function unknown function 1 88821 88952
AMR57810.1 KU130129_p77 hypothetical protein phrog_4349 Rz-like spanin lysis 1 46822 47247
AMR57826.1 KU130129_p93 hypothetical protein phrog_6310 unknown function unknown function 1 53970 54095
AMR57764.1 KU130129_p31 hypothetical protein phrog_1827 ATP-dependent protease other -1 11584 12201
AMR57868.1 KU130129_p135 hypothetical protein phrog_899 unknown function unknown function 1 79102 79356
AMR57863.1 KU130129_p130 hypothetical protein phrog_5658 pyrophosphatase other 1 77171 77584
AMR57794.1 KU130129_p61 hypothetical protein phrog_32884 unknown function unknown function 1 33290 33505
AMR57790.1 KU130129_p57 homing endonuclease phrog_28368 unknown function unknown function 1 31390 31587
AMR57821.1 KU130129_p88 hypothetical protein phrog_4256 unknown function unknown function 1 51558 51902
AMR57884.1 KU130129_p151 hypothetical protein phrog_2267 unknown function unknown function 1 86584 86895
AMR57805.1 KU130129_p72 tail fiber protein phrog_2282 tail fiber protein tail 1 41955 44039
AMR57751.1 KU130129_p18 hypothetical protein phrog_5447 unknown function unknown function -1 4866 5087
AMR57803.1 KU130129_p70 baseplate protein phrog_6 baseplate wedge subunit tail 1 39741 41198
AMR57862.1 KU130129_p129 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 76934 77158
AMR57899.1 KU130129_p166 hypothetical protein phrog_36482 unknown function unknown function 1 91513 91722
AMR57900.1 KU130129_p167 hypothetical protein phrog_23951 unknown function unknown function -1 91988 92152
AMR57748.1 KU130129_p15 hypothetical protein phrog_16860 unknown function unknown function -1 4227 4388
AMR57781.1 KU130129_p48 capsid protein phrog_29 major head protein head and packaging 1 25979 27040
AMR57741.1 KU130129_p8 hypothetical protein phrog_12741 unknown function unknown function -1 2201 2335
AMR57836.1 KU130129_p103 hypothetical protein phrog_17732 unknown function unknown function 1 63403 63522
AMR57752.1 KU130129_p19 hypothetical protein phrog_30537 unknown function unknown function -1 5087 5350
AMR57777.1 KU130129_p44 hypothetical protein phrog_113 portal protein head and packaging 1 22322 24187
AMR57858.1 KU130129_p125 hypothetical protein phrog_14187 unknown function unknown function 1 76090 76287