Genomic map of Pseudomonas phage vB_PsyM_KIL3b (KU130131)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU130131
Definition
Pseudomonas phage vB_PsyM_KIL3b, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Flaumdravirus; Pseudomonas virus KIL4; Pseudomonas phage vB_PsyM_KIL1.
DB of origin
NUCCORE
Length
92095
Host Name
Pseudomonas syringae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
161
%GC
44.72
Number of singletons
2
Number of paralogs
13

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AMR58129.1 KU130131_p59 hypothetical protein phrog_280 virion structural protein head and packaging 1 32551 33075
AMR58127.1 KU130131_p57 structural protein phrog_205 tail sheath tail 1 30468 31538
AMR58222.1 KU130131_p152 hypothetical protein phrog_3199 unknown function unknown function 1 87393 87653
AMR58107.1 KU130131_p37 hypothetical protein phrog_3900 unknown function unknown function 1 15692 16012
AMR58187.1 KU130131_p117 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 70826 71743
AMR58134.1 KU130131_p64 hypothetical protein phrog_4625 unknown function unknown function 1 34936 35157
AMR58160.1 KU130131_p90 hypothetical protein phrog_13035 unknown function unknown function 1 53219 53569
AMR58121.1 KU130131_p51 hypothetical protein phrog_1732 unknown function unknown function 1 26903 27385
AMR58085.1 KU130131_p15 hypothetical protein phrog_12988 unknown function unknown function -1 4403 4642
AMR58078.1 KU130131_p8 hypothetical protein phrog_16192 unknown function unknown function -1 2289 2567
AMR58172.1 KU130131_p102 hypothetical protein phrog_10905 unknown function unknown function 1 63290 63670
AMR58204.1 KU130131_p134 hypothetical protein phrog_25807 unknown function unknown function 1 80519 80872
AMR58138.1 KU130131_p68 tail protein phrog_196 baseplate hub tail 1 38808 39731
AMR58128.1 KU130131_p58 endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 31830 32546
AMR58108.1 KU130131_p38 hypothetical protein phrog_19297 unknown function unknown function -1 16235 16477
AMR58206.1 KU130131_p136 hypothetical protein phrog_14647 unknown function unknown function 1 81335 81595
AMR58090.1 KU130131_p20 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 6484 7035
AMR58226.1 KU130131_p156 hypothetical protein phrog_12215 unknown function unknown function 1 88636 88887
AMR58081.1 KU130131_p11 hypothetical protein phrog_16170 unknown function unknown function -1 3206 3391
AMR58131.1 KU130131_p61 hypothetical protein phrog_280 virion structural protein head and packaging 1 33654 34187
AMR58112.1 KU130131_p42 hypothetical protein phrog_17509 unknown function unknown function 1 18364 19209
AMR58223.1 KU130131_p153 hypothetical protein phrog_5336 unknown function unknown function 1 87712 88047
AMR58207.1 KU130131_p137 hypothetical protein phrog_13040 unknown function unknown function 1 81592 81807
AMR58205.1 KU130131_p135 anti-sigma factor phrog_3118 HNH endonuclease DNA, RNA and nucleotide metabolism 1 80943 81338
AMR58210.1 KU130131_p140 hypothetical protein phrog_5041 unknown function unknown function 1 82266 82460
AMR58093.1 KU130131_p23 hypothetical protein phrog_15470 unknown function unknown function -1 8460 8657
AMR58082.1 KU130131_p12 hypothetical protein phrog_10873 unknown function unknown function -1 3388 3723
AMR58178.1 KU130131_p108 restriction endonuclease phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 65833 66492
AMR58213.1 KU130131_p143 hypothetical protein phrog_13300 unknown function unknown function 1 84995 85141
AMR58185.1 KU130131_p115 hypothetical protein phrog_14002 unknown function unknown function 1 69881 70096
AMR58095.1 KU130131_p25 DNA binding protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism -1 9150 9740
AMR58163.1 KU130131_p93 hypothetical protein phrog_12169 unknown function unknown function 1 55063 55284
AMR58146.1 KU130131_p76 endolysin phrog_2860 endolysin head and packaging 1 47106 47669
AMR58135.1 KU130131_p65 tape measure protein phrog_991 tail length tape measure protein tail 1 35168 37579
AMR58145.1 KU130131_p75 tail fiber protein phrog_2282 tail fiber protein tail 1 45624 47096
AMR58103.1 KU130131_p33 hypothetical protein phrog_5067 unknown function unknown function -1 13560 13916
AMR58074.1 KU130131_p4 hypothetical protein phrog_18660 unknown function unknown function -1 1444 1629
AMR58161.1 KU130131_p91 hypothetical protein phrog_1491 tail fiber protein tail 1 53639 54256
AMR58113.1 KU130131_p43 hypothetical protein phrog_17443 unknown function unknown function 1 19286 19411
AMR58136.1 KU130131_p66 hypothetical protein phrog_817 tail fiber protein tail 1 37687 38451
AMR58102.1 KU130131_p32 phosphate starvation protein phrog_170 PhoH-like phosphate starvation-inducible other -1 12619 13353
AMR58214.1 KU130131_p144 hypothetical protein phrog_6140 unknown function unknown function 1 85146 85376
AMR58179.1 KU130131_p109 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 66493 67524
AMR58228.1 KU130131_p158 hypothetical protein phrog_4025 unknown function unknown function 1 89265 89519
AMR58193.1 KU130131_p123 hypothetical protein phrog_15563 unknown function unknown function 1 76589 76900
AMR58191.1 KU130131_p121 ribonucleotide-diphosphate reductase alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 73967 75694
AMR58217.1 KU130131_p147 HNH endonuclease phrog_4578 HNH endonuclease DNA, RNA and nucleotide metabolism 1 85974 86231
AMR58154.1 KU130131_p84 hypothetical protein phrog_18434 unknown function unknown function -1 51045 51350
AMR58216.1 KU130131_p146 hypothetical protein singleton unknown function unknown function 1 85700 85981
AMR58208.1 KU130131_p138 hypothetical protein phrog_12713 unknown function unknown function 1 81804 82037
AMR58170.1 KU130131_p100 hypothetical protein phrog_10599 unknown function unknown function 1 62775 63062
AMR58140.1 KU130131_p70 tail lysozyme phrog_120 baseplate wedge subunit tail 1 40498 40863
AMR58200.1 KU130131_p130 pyrophosphatase phrog_5658 pyrophosphatase other 1 78228 78641
AMR58109.1 KU130131_p39 hypothetical protein phrog_11200 unknown function unknown function 1 16932 17057
AMR58117.1 KU130131_p47 methyltransferase phrog_1530 DNA methyltransferase other 1 24002 24451
AMR58227.1 KU130131_p157 hypothetical protein phrog_18035 unknown function unknown function 1 88891 89058
AMR58183.1 KU130131_p113 hypothetical protein phrog_4276 unknown function unknown function 1 69523 69735
AMR58083.1 KU130131_p13 hypothetical protein phrog_11764 unknown function unknown function -1 3833 4171
AMR58097.1 KU130131_p27 hypothetical protein phrog_14679 unknown function unknown function -1 10065 10406
AMR58142.1 KU130131_p72 hypothetical protein phrog_587 structural protein head and packaging 1 42336 43070
AMR58165.1 KU130131_p95 hypothetical protein phrog_12645 unknown function unknown function 1 55386 55727
AMR58162.1 KU130131_p92 hypothetical protein phrog_2529 unknown function unknown function 1 54722 55066
AMR58126.1 KU130131_p56 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29548 30237
AMR58209.1 KU130131_p139 hypothetical protein phrog_4323 unknown function unknown function 1 82037 82183
AMR58167.1 KU130131_p97 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 55888 58689
AMR58220.1 KU130131_p150 hypothetical protein phrog_17824 unknown function unknown function 1 86817 86933
AMR58231.1 KU130131_p161 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 91123 91776
AMR58229.1 KU130131_p159 hypothetical protein phrog_18501 unknown function unknown function 1 89719 89907
AMR58190.1 KU130131_p120 ribonucleotide-diphosphate reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 72504 73970
AMR58088.1 KU130131_p18 DNA binding protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism -1 5350 5976
AMR58130.1 KU130131_p60 hypothetical protein phrog_280 virion structural protein head and packaging 1 33141 33644
AMR58153.1 KU130131_p83 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism -1 49886 51028
AMR58158.1 KU130131_p88 hypothetical protein phrog_12336 unknown function unknown function 1 52658 52852
AMR58144.1 KU130131_p74 hypothetical protein phrog_1795 tail fiber protein tail 1 45180 45599
AMR58152.1 KU130131_p82 hypothetical protein phrog_3899 unknown function unknown function 1 49412 49735
AMR58086.1 KU130131_p16 hypothetical protein phrog_14326 RNA ligase DNA, RNA and nucleotide metabolism -1 4642 4818
AMR58188.1 KU130131_p118 HNH endonuclease phrog_5046 HNH endonuclease DNA, RNA and nucleotide metabolism 1 71733 72167
AMR58174.1 KU130131_p104 hypothetical protein phrog_2340 endonuclease DNA, RNA and nucleotide metabolism 1 64744 65145
AMR58225.1 KU130131_p155 hypothetical protein phrog_11435 unknown function unknown function 1 88221 88643
AMR58201.1 KU130131_p131 hypothetical protein phrog_13468 unknown function unknown function 1 78693 79280
AMR58173.1 KU130131_p103 hypothetical protein phrog_2544 unknown function unknown function 1 63746 64747
AMR58076.1 KU130131_p6 hypothetical protein phrog_36989 unknown function unknown function -1 1837 2151
AMR58199.1 KU130131_p129 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 77991 78215
AMR58089.1 KU130131_p19 hypothetical protein phrog_2686 unknown function unknown function -1 6024 6494
AMR58176.1 KU130131_p106 hypothetical protein phrog_17673 unknown function unknown function 1 65341 65529
AMR58159.1 KU130131_p89 hypothetical protein phrog_4256 unknown function unknown function 1 52852 53196
AMR58197.1 KU130131_p127 hypothetical protein phrog_17804 unknown function unknown function 1 77679 77849
AMR58189.1 KU130131_p119 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 72160 72501
AMR58150.1 KU130131_p80 hypothetical protein phrog_5388 Rz-like spanin lysis 1 48934 49119
AMR58110.1 KU130131_p40 HNH endonuclease phrog_2255 HNH endonuclease DNA, RNA and nucleotide metabolism 1 17054 17476
AMR58094.1 KU130131_p24 cytidine and deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 8654 9160
AMR58196.1 KU130131_p126 hypothetical protein phrog_12065 unknown function unknown function 1 77344 77673
AMR58072.1 KU130131_p2 hypothetical protein phrog_18558 unknown function unknown function -1 854 1054
AMR58221.1 KU130131_p151 hypothetical protein phrog_11538 unknown function unknown function 1 86936 87319
AMR58198.1 KU130131_p128 DNA binding protein phrog_16351 DNA binding protein DNA, RNA and nucleotide metabolism 1 77842 77979
AMR58215.1 KU130131_p145 hypothetical protein phrog_2267 unknown function unknown function 1 85441 85752
AMR58111.1 KU130131_p41 hypothetical protein phrog_4770 unknown function unknown function 1 18098 18367
AMR58096.1 KU130131_p26 hypothetical protein phrog_18214 unknown function unknown function -1 9727 10053
AMR58099.1 KU130131_p29 hypothetical protein phrog_3948 unknown function unknown function -1 10826 11092
AMR58166.1 KU130131_p96 hypothetical protein phrog_13446 unknown function unknown function 1 55724 55891
AMR58203.1 KU130131_p133 hypothetical protein phrog_4317 unknown function unknown function 1 79767 80507
AMR58141.1 KU130131_p71 baseplate component phrog_6 baseplate wedge subunit tail 1 40866 42323
AMR58181.1 KU130131_p111 exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 68156 69067
AMR58123.1 KU130131_p53 hypothetical protein phrog_939 head protein head and packaging 1 27847 28215
AMR58155.1 KU130131_p85 hypothetical protein phrog_464 unknown function unknown function 1 51746 52051
AMR58101.1 KU130131_p31 serine protease phrog_1827 ATP-dependent protease other -1 12009 12626
AMR58120.1 KU130131_p50 major capsid protein phrog_29 major head protein head and packaging 1 25785 26846
AMR58137.1 KU130131_p67 hypothetical protein phrog_349 virion structural protein head and packaging 1 38461 38802
AMR58084.1 KU130131_p14 hypothetical protein phrog_16860 unknown function unknown function -1 4181 4342
AMR58116.1 KU130131_p46 hypothetical protein phrog_113 portal protein head and packaging 1 22128 23993
AMR58114.1 KU130131_p44 terminase large subunit phrog_979 terminase large subunit head and packaging 1 19587 21241
AMR58168.1 KU130131_p98 DNA binding protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58692 59261
AMR58186.1 KU130131_p116 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis 1 70080 70655
AMR58156.1 KU130131_p86 hypothetical protein phrog_3754 unknown function unknown function 1 52051 52452
AMR58125.1 KU130131_p55 hypothetical protein phrog_4087 unknown function unknown function 1 28967 29536
AMR58087.1 KU130131_p17 hypothetical protein phrog_5447 unknown function unknown function -1 4820 5041
AMR58211.1 KU130131_p141 restriction endonuclease phrog_8790 restriction endonuclease DNA, RNA and nucleotide metabolism 1 82505 82930
AMR58151.1 KU130131_p81 hypothetical protein phrog_4172 unknown function unknown function 1 49121 49402
AMR58230.1 KU130131_p160 hypothetical protein phrog_31424 unknown function unknown function 1 90256 90456
AMR58133.1 KU130131_p63 hypothetical protein phrog_1613 tail assembly chaperone tail 1 34550 34912
AMR58091.1 KU130131_p21 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 7010 8230
AMR58105.1 KU130131_p35 hypothetical protein phrog_25138 unknown function unknown function 1 14465 14548
AMR58180.1 KU130131_p110 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 67614 68159
AMR58075.1 KU130131_p5 hypothetical protein phrog_17973 unknown function unknown function -1 1631 1837
AMR58115.1 KU130131_p45 hypothetical protein phrog_2081 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21451 21987
AMR58143.1 KU130131_p73 tail fiber protein phrog_2282 tail fiber protein tail 1 43080 45164
AMR58224.1 KU130131_p154 hypothetical protein phrog_18479 unknown function unknown function 1 88047 88166
AMR58118.1 KU130131_p48 hypothetical protein phrog_4103 unknown function unknown function 1 24448 25362
AMR58139.1 KU130131_p69 baseplate protein phrog_11 baseplate spike tail 1 39728 40489
AMR58132.1 KU130131_p62 homing endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 34196 34546
AMR58073.1 KU130131_p3 hypothetical protein phrog_18078 unknown function unknown function -1 1131 1439
AMR58119.1 KU130131_p49 hypothetical protein phrog_49 head decoration head and packaging 1 25388 25774
AMR58212.1 KU130131_p142 hypothetical protein phrog_12785 unknown function unknown function 1 83648 84904
AMR58157.1 KU130131_p87 hypothetical protein phrog_12621 unknown function unknown function 1 52449 52661
AMR58080.1 KU130131_p10 hypothetical protein phrog_15766 unknown function unknown function -1 2853 3041
AMR58149.1 KU130131_p79 hypothetical protein phrog_16936 unknown function unknown function 1 48522 48959
AMR58195.1 KU130131_p125 hypothetical protein phrog_14187 unknown function unknown function 1 77147 77344
AMR58124.1 KU130131_p54 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28212 28967
AMR58218.1 KU130131_p148 hypothetical protein phrog_6261 unknown function unknown function 1 86244 86450
AMR58202.1 KU130131_p132 hypothetical protein singleton unknown function unknown function 1 79621 79716
AMR58092.1 KU130131_p22 hypothetical protein phrog_11656 unknown function unknown function -1 8227 8463
AMR58079.1 KU130131_p9 hypothetical protein phrog_12309 unknown function unknown function -1 2653 2856
AMR58219.1 KU130131_p149 hypothetical protein phrog_4323 unknown function unknown function 1 86589 86729
AMR58077.1 KU130131_p7 hypothetical protein phrog_12741 unknown function unknown function -1 2155 2289
AMR58147.1 KU130131_p77 hypothetical protein phrog_5847 holin lysis 1 47680 47916
AMR58169.1 KU130131_p99 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 59320 62574
AMR58184.1 KU130131_p114 hypothetical protein phrog_17850 unknown function unknown function 1 69732 69884
AMR58122.1 KU130131_p52 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 27369 27836
AMR58148.1 KU130131_p78 hypothetical protein phrog_4349 Rz-like spanin lysis 1 47947 48372
AMR58192.1 KU130131_p122 DNA adenine methyltransferase phrog_5172 unknown function unknown function 1 75796 76599
AMR58071.1 KU130131_p1 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism -1 92 613
AMR58182.1 KU130131_p112 hypothetical protein phrog_15326 unknown function unknown function 1 69202 69510
AMR58194.1 KU130131_p124 hypothetical protein phrog_18010 unknown function unknown function 1 76974 77147
AMR58171.1 KU130131_p101 hypothetical protein phrog_14269 unknown function unknown function 1 63059 63244
AMR58100.1 KU130131_p30 antirepressor protein phrog_63 anti-repressor Ant transcription regulation -1 11157 11939
AMR58177.1 KU130131_p107 hypothetical protein phrog_7029 unknown function unknown function 1 65526 65777
AMR58098.1 KU130131_p28 HNH endonuclease phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism -1 10369 10797
AMR58175.1 KU130131_p105 hypothetical protein phrog_17732 unknown function unknown function 1 65209 65328
AMR58104.1 KU130131_p34 hypothetical protein phrog_5019 unknown function unknown function -1 13922 14362
AMR58164.1 KU130131_p94 hypothetical protein phrog_6310 unknown function unknown function 1 55268 55393
AMR58106.1 KU130131_p36 DNA/RNA-binding protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 14796 15362