Genomic map of Xanthomonas phage XAJ24 (KU197013)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU197013
Definition
Xanthomonas phage XAJ24, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Pradovirus; Xanthomonas virus XAJ24.
DB of origin
NUCCORE
Length
44862
Host Name
Xanthomonas arboricola
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
58.2
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AMW36091.1 KU197013_p28 DNA dependent RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 16336 18834
AMW36098.1 KU197013_p37 endonuclease VII phrog_2633 endonuclease VII DNA, RNA and nucleotide metabolism 1 24299 24733
AMW36090.1 KU197013_p27 hypothetical protein singleton unknown function unknown function 1 16145 16336
AMW36078.1 KU197013_p13 hypothetical protein phrog_13079 unknown function unknown function 1 4978 5424
AMW36115.1 KU197013_p2 hypothetical protein singleton unknown function unknown function 1 1159 1272
AMW36081.1 KU197013_p16 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 6753 7934
AMW36111.1 KU197013_p51 endolysin phrog_7 endolysin lysis 1 43266 43817
AMW36119.1 KU197013_p32 hypothetical protein phrog_449 head-tail adaptor connector 1 19958 21496
AMW36072.1 KU197013_p7 hypothetical protein phrog_17163 unknown function unknown function 1 3060 3188
AMW36095.1 KU197013_p34 major capsid protein phrog_267 major head protein head and packaging 1 22335 23336
AMW36120.1 KU197013_p49 hypothetical protein singleton unknown function unknown function 1 41567 43006
AMW36069.1 KU197013_p4 hypothetical protein singleton unknown function unknown function 1 1912 2091
AMW36070.1 KU197013_p5 hypothetical protein phrog_1448 unknown function unknown function 1 2337 2852
AMW36097.1 KU197013_p36 tail tubular protein A phrog_446 tail protein tail 1 23675 24289
AMW36096.1 KU197013_p35 hypothetical protein phrog_18075 unknown function unknown function 1 23409 23621
AMW36079.1 KU197013_p14 hypothetical protein phrog_22192 unknown function unknown function 1 5421 5672
AMW36076.1 KU197013_p11 hypothetical protein phrog_18386 unknown function unknown function 1 4220 4561
AMW36086.1 KU197013_p22 DNA exonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 13131 13520
AMW36102.1 KU197013_p41 internal virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 30478 35382
AMW36084.1 KU197013_p20 hypothetical protein phrog_6234 host RecBCD nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 12047 12202
AMW36089.1 KU197013_p26 ATP dependent DNA lygase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 15246 16148
AMW36099.1 KU197013_p38 tail tubular protein B phrog_457 tail protein tail 1 24730 27234
AMW36088.1 KU197013_p25 hypothetical protein phrog_14849 unknown function unknown function 1 14938 15249
AMW36082.1 KU197013_p17 hypothetical protein phrog_22988 unknown function unknown function 1 7931 8248
AMW36068.1 KU197013_p3 hypothetical protein phrog_15315 unknown function unknown function 1 1619 1864
AMW36108.1 KU197013_p47 terminase small subunit phrog_891 terminase small subunit head and packaging 1 39477 39764
AMW36080.1 KU197013_p15 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 5789 6610
AMW36101.1 KU197013_p40 internal virion protein phrog_3883 internal virion protein head and packaging 1 28277 30466
AMW36071.1 KU197013_p6 hypothetical protein phrog_4927 unknown function unknown function 1 2852 3058
AMW36094.1 KU197013_p33 scaffold protein phrog_1018 head scaffolding protein head and packaging 1 21493 22314
AMW36075.1 KU197013_p10 hypothetical protein phrog_17604 unknown function unknown function 1 3930 4220
AMW36093.1 KU197013_p31 hypothetical protein phrog_6529 unknown function unknown function 1 19609 19956
AMW36085.1 KU197013_p21 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 12202 13134
AMW36073.1 KU197013_p8 hypothetical protein phrog_18127 unknown function unknown function 1 3169 3399
AMW36087.1 KU197013_p24 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis 1 14393 14941
AMW36105.1 KU197013_p44 tail fiber protein phrog_4176 tail fiber protein tail 1 37758 38705
AMW36106.1 KU197013_p45 tail fiber protein phrog_4950 tail fiber protein tail 1 38702 39283
AMW36107.1 KU197013_p46 holin phrog_14453 holin lysis 1 39296 39496
AMW36117.1 KU197013_p23 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 13517 14383
AMW36112.1 KU197013_p52 i-spanin phrog_5151 Rz-like spanin lysis 1 43796 44119
AMW36100.1 KU197013_p39 internal virion protein phrog_11550 internal virion protein head and packaging 1 27234 28109
AMW36074.1 KU197013_p9 hypothetical protein phrog_18653 unknown function unknown function 1 3392 3937
AMW36116.1 KU197013_p18 hypothetical protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 8286 10763
AMW36092.1 KU197013_p29 hypothetical protein phrog_5112 unknown function unknown function 1 18948 19151
AMW36113.1 KU197013_p53 o-spanin phrog_456 Rz-like spanin lysis 1 44079 44315
AMW36109.1 KU197013_p48 terminase large subunit phrog_38 terminase large subunit head and packaging 1 39757 41565
AMW36110.1 KU197013_p50 hypothetical protein phrog_15619 unknown function unknown function 1 43017 43262
AMW36077.1 KU197013_p12 hypothetical protein phrog_3543 unknown function unknown function 1 4558 4899
AMW36104.1 KU197013_p43 tail fiber protein phrog_12940 tail fiber protein tail 1 36562 37761
AMW36103.1 KU197013_p42 tail fiber protein phrog_2710 tail fiber protein tail 1 35444 36562
AMW36114.1 KU197013_p1 hypothetical protein singleton unknown function unknown function 1 77 247
AMW36118.1 KU197013_p30 hypothetical protein phrog_6472 unknown function unknown function 1 19255 19605
AMW36083.1 KU197013_p19 hypothetical protein phrog_862 unknown function unknown function 1 11163 12047