Genomic map of Xanthomonas phage XAJ2 (KU197014)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU197014
Definition
Xanthomonas phage XAJ2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
49241
Host Name
Xanthomonas arboricola
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
47.43
Number of singletons
38
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AMW36196.1 KU197014_p29 exonuclease phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 29143 30021
AMW36125.1 KU197014_p5 hemagglutinin-like protein phrog_19495 unknown function unknown function 1 4720 6426
AMW36126.1 KU197014_p6 scaffold protein phrog_206 head scaffolding protein head and packaging 1 6506 7210
AMW36167.1 KU197014_p52 hypothetical protein singleton unknown function unknown function 1 40794 41138
AMW36178.1 KU197014_p63 hypothetical protein phrog_54 DksA-like zinc-finger protein other 1 43580 43801
AMW36175.1 KU197014_p60 hypothetical protein singleton unknown function unknown function 1 42809 43051
AMW36137.1 KU197014_p18 hypothetical protein phrog_2913 glycoside hydrolase other 1 16618 17211
AMW36184.1 KU197014_p70 hypothetical protein singleton unknown function unknown function 1 45590 45754
AMW36172.1 KU197014_p57 hypothetical protein singleton unknown function unknown function 1 42097 42288
AMW36193.1 KU197014_p79 hypothetical protein singleton unknown function unknown function 1 49081 49209
AMW36153.1 KU197014_p37 MazG phrog_229 MazG-like pyrophosphatase other -1 33425 34144
AMW36133.1 KU197014_p14 tail chaperonine protein phrog_313 Tail assembly chaperone tail 1 11862 12302
AMW36149.1 KU197014_p32 single-stranded DNA-binding protein phrog_6015 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 30618 31433
AMW36159.1 KU197014_p43 hypothetical protein singleton unknown function unknown function -1 38089 38241
AMW36187.1 KU197014_p73 hypothetical protein phrog_7597 unknown function unknown function 1 46316 46939
AMW36199.1 KU197014_p64 hypothetical protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 43798 44115
AMW36155.1 KU197014_p39 replicative primase/helicase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 34519 36882
AMW36140.1 KU197014_p21 hypothetical protein phrog_4271 tail protein tail 1 18514 22377
AMW36191.1 KU197014_p77 hypothetical protein singleton unknown function unknown function 1 48646 48936
AMW36158.1 KU197014_p42 hypothetical protein singleton unknown function unknown function -1 37695 38087
AMW36181.1 KU197014_p67 nuclease phrog_824 unknown function unknown function 1 44637 45122
AMW36177.1 KU197014_p62 hypothetical protein singleton unknown function unknown function 1 43308 43577
AMW36151.1 KU197014_p35 hypothetical protein singleton unknown function unknown function -1 32665 32850
AMW36182.1 KU197014_p68 hypothetical protein singleton unknown function unknown function 1 45119 45301
AMW36130.1 KU197014_p10 virion protein phrog_477 head-tail adaptor Ad1 connector 1 8821 9330
AMW36134.1 KU197014_p15 tail chaperonine protein phrog_3817 tail chaperonin tail 1 12377 12640
AMW36124.1 KU197014_p4 head morphogenesis protein phrog_241 head morphogenesis head and packaging 1 3664 4719
AMW36195.1 KU197014_p27 hypothetical protein phrog_23504 unknown function unknown function -1 27359 27568
AMW36135.1 KU197014_p16 tail completion protein phrog_169 tail completion or Neck1 protein connector 1 12640 13083
AMW36138.1 KU197014_p19 hypothetical protein phrog_778 tail assembly protein tail 1 17208 18089
AMW36141.1 KU197014_p22 hypothetical protein singleton unknown function unknown function 1 22381 23379
AMW36197.1 KU197014_p34 hypothetical protein singleton unknown function unknown function -1 32179 32475
AMW36180.1 KU197014_p66 hypothetical protein phrog_32645 unknown function unknown function 1 44401 44637
AMW36129.1 KU197014_p9 hypothetical protein singleton unknown function unknown function 1 8505 8816
AMW36146.1 KU197014_p28 DNA/RNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 27558 29153
AMW36179.1 KU197014_p65 hypothetical protein singleton unknown function unknown function 1 44112 44414
AMW36147.1 KU197014_p30 hypothetical protein singleton unknown function unknown function -1 30062 30298
AMW36136.1 KU197014_p17 tape measure protein phrog_3336 tail length tape measure protein tail 1 13076 16612
AMW36164.1 KU197014_p48 hypothetical protein singleton unknown function unknown function -1 39278 39535
AMW36166.1 KU197014_p51 hypothetical protein singleton unknown function unknown function 1 40440 40781
AMW36123.1 KU197014_p3 portal protein phrog_145 portal protein head and packaging 1 2107 3651
AMW36154.1 KU197014_p38 hypothetical protein phrog_6223 transcriptional repressor transcription regulation 1 34302 34517
AMW36161.1 KU197014_p45 hypothetical protein singleton unknown function unknown function -1 38673 38855
AMW36139.1 KU197014_p20 cell wall peptidase phrog_329 minor tail protein tail 1 18089 18517
AMW36162.1 KU197014_p46 hypothetical protein singleton unknown function unknown function -1 38888 39043
AMW36183.1 KU197014_p69 hypothetical protein singleton unknown function unknown function 1 45298 45510
AMW36127.1 KU197014_p7 coat protein phrog_247 major head protein head and packaging 1 7226 8251
AMW36121.1 KU197014_p1 small terminase phrog_5334 terminase small subunit head and packaging 1 34 516
AMW36150.1 KU197014_p33 recombinase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 31499 32179
AMW36170.1 KU197014_p55 hypothetical protein phrog_10560 unknown function unknown function 1 41587 41835
AMW36189.1 KU197014_p75 holin singleton unknown function unknown function 1 47584 48021
AMW36171.1 KU197014_p56 hypothetical protein singleton unknown function unknown function 1 41832 42119
AMW36176.1 KU197014_p61 hypothetical protein singleton unknown function unknown function 1 43048 43311
AMW36169.1 KU197014_p54 hypothetical protein singleton unknown function unknown function 1 41412 41585
AMW36144.1 KU197014_p25 DNA polymerase III beta subunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 26036 27055
AMW36131.1 KU197014_p12 minor tail protein phrog_179 tail terminator connector 1 9712 10185
AMW36192.1 KU197014_p78 hypothetical protein singleton unknown function unknown function 1 48936 49109
AMW36190.1 KU197014_p76 holin phrog_26796 holin lysis 1 48018 48653
AMW36185.1 KU197014_p71 hypothetical protein singleton unknown function unknown function 1 45751 46014
AMW36142.1 KU197014_p23 hypothetical protein singleton unknown function unknown function 1 23389 24012
AMW36156.1 KU197014_p40 hypothetical protein singleton unknown function unknown function -1 36927 37154
AMW36168.1 KU197014_p53 hypothetical protein singleton unknown function unknown function 1 41140 41415
AMW36198.1 KU197014_p50 hypothetical protein phrog_10287 unknown function unknown function 1 40183 40440
AMW36148.1 KU197014_p31 hypothetical protein singleton unknown function unknown function 1 30395 30508
AMW36194.1 KU197014_p11 head tail joining protein phrog_161 head closure Hc1 connector 1 9332 9712
AMW36143.1 KU197014_p24 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 24009 26036
AMW36152.1 KU197014_p36 hypothetical protein phrog_2480 unknown function unknown function -1 32850 33353
AMW36174.1 KU197014_p59 hypothetical protein singleton unknown function unknown function 1 42443 42634
AMW36186.1 KU197014_p72 hypothetical protein phrog_6168 unknown function unknown function 1 46027 46215
AMW36163.1 KU197014_p47 hypothetical protein singleton unknown function unknown function -1 39040 39231
AMW36165.1 KU197014_p49 hypothetical protein singleton unknown function unknown function -1 39594 39707
AMW36173.1 KU197014_p58 hypothetical protein singleton unknown function unknown function 1 42285 42446
AMW36128.1 KU197014_p8 head fiber protein singleton unknown function unknown function 1 8307 8492
AMW36132.1 KU197014_p13 major tail tube protein phrog_290 minor tail protein tail 1 10198 11781
AMW36157.1 KU197014_p41 hypothetical protein singleton unknown function unknown function -1 37151 37648
AMW36160.1 KU197014_p44 hypothetical protein singleton unknown function unknown function -1 38431 38634
AMW36145.1 KU197014_p26 hypothetical protein phrog_11184 unknown function unknown function -1 27027 27347
AMW36122.1 KU197014_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 497 2095
AMW36188.1 KU197014_p74 endolysin phrog_7 endolysin lysis 1 47123 47557