Genomic map of Pseudomonas phage AAT-1 (KU204984)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU204984
Definition
Pseudomonas phage AAT-1, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pamexvirus; unclassified Pamexvirus.
DB of origin
PVOG
Length
57599
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
76
%GC
65.89
Number of singletons
4
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AME18066.1 KU204984_p40 hypothetical protein phrog_16873 unknown function unknown function -1 32949 33458
AME18046.1 KU204984_p21 major tail structural protein phrog_290 minor tail protein tail 1 17934 18872
AME18058.1 KU204984_p32 hypothetical protein phrog_14936 unknown function unknown function 1 30148 30459
AME18089.1 KU204984_p63 nucleotide triphosphate hydrolase phrog_10855 hydrolase other -1 47362 47898
AME18032.1 KU204984_p5 minor head protein phrog_21789 virion structural protein head and packaging 1 6125 9733
AME18041.1 KU204984_p16 hypothetical protein phrog_6213 unknown function unknown function 1 15689 16153
AME18045.1 KU204984_p20 tail terminator protein phrog_179 tail terminator connector 1 17493 17915
AME18096.1 KU204984_p70 hypothetical protein phrog_19009 unknown function unknown function 1 51504 51689
AME18047.1 KU204984_p22 hypothetical protein phrog_313 Tail assembly chaperone tail 1 18901 19353
AME18029.1 KU204984_p7 hypothetical protein phrog_4814 unknown function unknown function 1 10046 10321
AME18100.1 KU204984_p75 hypothetical protein phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 55703 56026
AME18095.1 KU204984_p69 hypothetical protein singleton unknown function unknown function -1 51269 51505
ANN44563.1 KU204984_p31 virion structural protein phrog_5363 unknown function unknown function 1 29723 30082
AME18050.1 KU204984_p24 virion structural protein phrog_687 structural protein head and packaging 1 22115 23626
AME18102.1 KU204984_p1 ribonucleotide reductase of clase II phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 92 1819
AME18033.1 KU204984_p8 virion structural protein phrog_206 head scaffolding protein head and packaging 1 10425 11201
AME18069.1 KU204984_p43 dihydrofolate reductase phrog_13578 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 34904 35359
AME18080.1 KU204984_p54 hypothetical protein phrog_1934 unknown function unknown function -1 43994 44446
AME18084.1 KU204984_p58 hypothetical protein phrog_7860 unknown function unknown function -1 45429 45617
AME18052.1 KU204984_p26 virion structural protein phrog_1082 tail assembly protein tail 1 24634 26316
AME18059.1 KU204984_p33 endolysin phrog_465 endolysin lysis 1 30456 30956
AME18056.1 KU204984_p30 virion structural protein phrog_1101 tail protein tail 1 27552 29726
AME18087.1 KU204984_p61 DNA binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 46347 46943
AME18076.1 KU204984_p50 hypothetical protein phrog_17205 unknown function unknown function -1 39411 39902
AME18071.1 KU204984_p45 hypothetical protein phrog_3322 endonuclease DNA, RNA and nucleotide metabolism -1 35828 36244
AME18049.2 KU204984_p23 tail tape measure protein phrog_1538 tail length tape measure protein tail 1 19618 22104
AME18067.1 KU204984_p41 hypothetical protein phrog_17767 unknown function unknown function -1 33599 34348
AME18068.1 KU204984_p42 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism -1 34485 34919
AME18060.1 KU204984_p34 i-spanin phrog_739 Rz-like spanin lysis 1 30967 31452
AME18038.1 KU204984_p13 hypothetical protein phrog_11770 unknown function unknown function -1 13669 13881
AME18078.1 KU204984_p52 hypothetical protein phrog_25007 unknown function unknown function -1 41519 41710
AME18083.1 KU204984_p57 hypothetical protein phrog_18640 unknown function unknown function -1 45095 45427
AME18054.1 KU204984_p28 hypothetical protein phrog_1180 tail assembly chaperone tail 1 27132 27365
AME18098.1 KU204984_p73 terminase large subunit phrog_4044 terminase small subunit head and packaging 1 54795 55400
AME18063.1 KU204984_p37 hypothetical protein phrog_8293 unknown function unknown function -1 32089 32337
AME18090.1 KU204984_p64 hypothetical protein phrog_17547 unknown function unknown function -1 47901 48524
AME18031.1 KU204984_p3 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 3620 4510
AME18092.1 KU204984_p66 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 49002 50531
AME18036.1 KU204984_p11 hypothetical protein phrog_624 DNA binding protein DNA, RNA and nucleotide metabolism -1 12754 13299
AME18074.1 KU204984_p48 hypothetical protein phrog_2053 unknown function unknown function -1 38089 38283
AME18055.1 KU204984_p29 hypothetical protein phrog_1196 tail assembly chaperone tail 1 27362 27565
AME18081.1 KU204984_p55 hypothetical protein phrog_18147 unknown function unknown function -1 44440 44835
AME18088.1 KU204984_p62 hypothetical protein phrog_464 unknown function unknown function -1 47072 47368
AME18027.1 KU204984_p2 hypothetical protein phrog_1735 unknown function unknown function 1 2423 3550
AME18093.1 KU204984_p67 hypothetical protein phrog_17764 unknown function unknown function -1 50531 50794
AME18070.1 KU204984_p44 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 35364 35828
AME18065.1 KU204984_p39 hypothetical protein phrog_18569 unknown function unknown function -1 32651 32938
AME18073.1 KU204984_p47 nucleotide pyrophosphohydrolase phrog_18404 hydrolase other -1 37207 38004
ANN44565.1 KU204984_p72 terminase small subunit singleton unknown function unknown function 1 54511 54780
AME18091.1 KU204984_p65 hypothetical protein singleton unknown function unknown function -1 48588 48848
AME18030.1 KU204984_p4 structural protein phrog_145 portal protein head and packaging 1 4592 6121
ANN44561.1 KU204984_p10 hypothetical protein phrog_18209 unknown function unknown function -1 11868 12740
AME18072.1 KU204984_p46 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 36311 37207
AME18101.1 KU204984_p76 terminase large subunit phrog_2 terminase large subunit head and packaging 1 56121 57599
AME18051.1 KU204984_p25 virion structural protein phrog_687 structural protein head and packaging 1 23637 24632
AME18028.1 KU204984_p6 hypothetical protein phrog_20070 unknown function unknown function 1 9750 10022
AME18037.1 KU204984_p12 hypothetical protein phrog_21393 unknown function unknown function -1 13362 13658
AME18053.1 KU204984_p27 FAD/FMN-containing dehydrogenase phrog_778 tail assembly protein tail 1 26313 27122
AME18062.1 KU204984_p36 hypothetical protein phrog_6420 unknown function unknown function 1 31624 31896
AME18094.1 KU204984_p68 hypothetical protein phrog_18196 unknown function unknown function -1 50796 51290
AME18082.1 KU204984_p56 hypothetical protein phrog_25659 unknown function unknown function -1 44832 45095
AME18077.1 KU204984_p51 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 40039 41535
AME18044.1 KU204984_p19 virion structural protein phrog_169 tail completion or Neck1 protein connector 1 17076 17477
ANN44564.1 KU204984_p35 o-spanin phrog_812 Rz-like spanin lysis 1 31265 31627
AME18086.1 KU204984_p60 hypothetical protein phrog_14658 unknown function unknown function -1 45877 46185
ANN44562.1 KU204984_p14 hypothetical protein singleton unknown function unknown function -1 13892 14176
AME18075.1 KU204984_p49 hypothetical protein phrog_11422 unknown function unknown function -1 38313 39308
AME18099.1 KU204984_p74 hypothetical protein phrog_54 DksA-like zinc-finger protein other 1 55443 55697
AME18040.1 KU204984_p15 major head protein phrog_212 major head protein head and packaging 1 14685 15614
AME18064.1 KU204984_p38 hypothetical protein phrog_17853 unknown function unknown function -1 32350 32649
AME18043.1 KU204984_p18 virion structural protein phrog_161 head closure Hc1 connector 1 16682 17074
AME18097.1 KU204984_p71 primase/polymerase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 51686 54022
AME18079.1 KU204984_p53 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 41719 43962
AME18034.1 KU204984_p9 GTP cyclohydrolase II phrog_1017 unknown function unknown function -1 11302 11811
AME18085.1 KU204984_p59 hypothetical protein phrog_29767 unknown function unknown function -1 45614 45832
AME18042.1 KU204984_p17 virion structural protein phrog_477 head-tail adaptor Ad1 connector 1 16164 16679