| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
KU204984 |
Definition |
Pseudomonas phage AAT-1, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pamexvirus; unclassified Pamexvirus. |
DB of origin |
PVOG |
Length |
57599 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
76 |
%GC |
65.89 |
Number of singletons |
4 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AME18066.1 | KU204984_p40 | hypothetical protein | phrog_16873 | unknown function | unknown function | -1 | 32949 | 33458 |
| AME18046.1 | KU204984_p21 | major tail structural protein | phrog_290 | minor tail protein | tail | 1 | 17934 | 18872 |
| AME18058.1 | KU204984_p32 | hypothetical protein | phrog_14936 | unknown function | unknown function | 1 | 30148 | 30459 |
| AME18089.1 | KU204984_p63 | nucleotide triphosphate hydrolase | phrog_10855 | hydrolase | other | -1 | 47362 | 47898 |
| AME18032.1 | KU204984_p5 | minor head protein | phrog_21789 | virion structural protein | head and packaging | 1 | 6125 | 9733 |
| AME18041.1 | KU204984_p16 | hypothetical protein | phrog_6213 | unknown function | unknown function | 1 | 15689 | 16153 |
| AME18045.1 | KU204984_p20 | tail terminator protein | phrog_179 | tail terminator | connector | 1 | 17493 | 17915 |
| AME18096.1 | KU204984_p70 | hypothetical protein | phrog_19009 | unknown function | unknown function | 1 | 51504 | 51689 |
| AME18047.1 | KU204984_p22 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 18901 | 19353 |
| AME18029.1 | KU204984_p7 | hypothetical protein | phrog_4814 | unknown function | unknown function | 1 | 10046 | 10321 |
| AME18100.1 | KU204984_p75 | hypothetical protein | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55703 | 56026 |
| AME18095.1 | KU204984_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51269 | 51505 |
| ANN44563.1 | KU204984_p31 | virion structural protein | phrog_5363 | unknown function | unknown function | 1 | 29723 | 30082 |
| AME18050.1 | KU204984_p24 | virion structural protein | phrog_687 | structural protein | head and packaging | 1 | 22115 | 23626 |
| AME18102.1 | KU204984_p1 | ribonucleotide reductase of clase II | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 92 | 1819 |
| AME18033.1 | KU204984_p8 | virion structural protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 10425 | 11201 |
| AME18069.1 | KU204984_p43 | dihydrofolate reductase | phrog_13578 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 34904 | 35359 |
| AME18080.1 | KU204984_p54 | hypothetical protein | phrog_1934 | unknown function | unknown function | -1 | 43994 | 44446 |
| AME18084.1 | KU204984_p58 | hypothetical protein | phrog_7860 | unknown function | unknown function | -1 | 45429 | 45617 |
| AME18052.1 | KU204984_p26 | virion structural protein | phrog_1082 | tail assembly protein | tail | 1 | 24634 | 26316 |
| AME18059.1 | KU204984_p33 | endolysin | phrog_465 | endolysin | lysis | 1 | 30456 | 30956 |
| AME18056.1 | KU204984_p30 | virion structural protein | phrog_1101 | tail protein | tail | 1 | 27552 | 29726 |
| AME18087.1 | KU204984_p61 | DNA binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 46347 | 46943 |
| AME18076.1 | KU204984_p50 | hypothetical protein | phrog_17205 | unknown function | unknown function | -1 | 39411 | 39902 |
| AME18071.1 | KU204984_p45 | hypothetical protein | phrog_3322 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 35828 | 36244 |
| AME18049.2 | KU204984_p23 | tail tape measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 19618 | 22104 |
| AME18067.1 | KU204984_p41 | hypothetical protein | phrog_17767 | unknown function | unknown function | -1 | 33599 | 34348 |
| AME18068.1 | KU204984_p42 | hypothetical protein | phrog_2165 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 34485 | 34919 |
| AME18060.1 | KU204984_p34 | i-spanin | phrog_739 | Rz-like spanin | lysis | 1 | 30967 | 31452 |
| AME18038.1 | KU204984_p13 | hypothetical protein | phrog_11770 | unknown function | unknown function | -1 | 13669 | 13881 |
| AME18078.1 | KU204984_p52 | hypothetical protein | phrog_25007 | unknown function | unknown function | -1 | 41519 | 41710 |
| AME18083.1 | KU204984_p57 | hypothetical protein | phrog_18640 | unknown function | unknown function | -1 | 45095 | 45427 |
| AME18054.1 | KU204984_p28 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | 1 | 27132 | 27365 |
| AME18098.1 | KU204984_p73 | terminase large subunit | phrog_4044 | terminase small subunit | head and packaging | 1 | 54795 | 55400 |
| AME18063.1 | KU204984_p37 | hypothetical protein | phrog_8293 | unknown function | unknown function | -1 | 32089 | 32337 |
| AME18090.1 | KU204984_p64 | hypothetical protein | phrog_17547 | unknown function | unknown function | -1 | 47901 | 48524 |
| AME18031.1 | KU204984_p3 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 3620 | 4510 |
| AME18092.1 | KU204984_p66 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 49002 | 50531 |
| AME18036.1 | KU204984_p11 | hypothetical protein | phrog_624 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 12754 | 13299 |
| AME18074.1 | KU204984_p48 | hypothetical protein | phrog_2053 | unknown function | unknown function | -1 | 38089 | 38283 |
| AME18055.1 | KU204984_p29 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | 1 | 27362 | 27565 |
| AME18081.1 | KU204984_p55 | hypothetical protein | phrog_18147 | unknown function | unknown function | -1 | 44440 | 44835 |
| AME18088.1 | KU204984_p62 | hypothetical protein | phrog_464 | unknown function | unknown function | -1 | 47072 | 47368 |
| AME18027.1 | KU204984_p2 | hypothetical protein | phrog_1735 | unknown function | unknown function | 1 | 2423 | 3550 |
| AME18093.1 | KU204984_p67 | hypothetical protein | phrog_17764 | unknown function | unknown function | -1 | 50531 | 50794 |
| AME18070.1 | KU204984_p44 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 35364 | 35828 |
| AME18065.1 | KU204984_p39 | hypothetical protein | phrog_18569 | unknown function | unknown function | -1 | 32651 | 32938 |
| AME18073.1 | KU204984_p47 | nucleotide pyrophosphohydrolase | phrog_18404 | hydrolase | other | -1 | 37207 | 38004 |
| ANN44565.1 | KU204984_p72 | terminase small subunit | singleton | unknown function | unknown function | 1 | 54511 | 54780 |
| AME18091.1 | KU204984_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48588 | 48848 |
| AME18030.1 | KU204984_p4 | structural protein | phrog_145 | portal protein | head and packaging | 1 | 4592 | 6121 |
| ANN44561.1 | KU204984_p10 | hypothetical protein | phrog_18209 | unknown function | unknown function | -1 | 11868 | 12740 |
| AME18072.1 | KU204984_p46 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 36311 | 37207 |
| AME18101.1 | KU204984_p76 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 56121 | 57599 |
| AME18051.1 | KU204984_p25 | virion structural protein | phrog_687 | structural protein | head and packaging | 1 | 23637 | 24632 |
| AME18028.1 | KU204984_p6 | hypothetical protein | phrog_20070 | unknown function | unknown function | 1 | 9750 | 10022 |
| AME18037.1 | KU204984_p12 | hypothetical protein | phrog_21393 | unknown function | unknown function | -1 | 13362 | 13658 |
| AME18053.1 | KU204984_p27 | FAD/FMN-containing dehydrogenase | phrog_778 | tail assembly protein | tail | 1 | 26313 | 27122 |
| AME18062.1 | KU204984_p36 | hypothetical protein | phrog_6420 | unknown function | unknown function | 1 | 31624 | 31896 |
| AME18094.1 | KU204984_p68 | hypothetical protein | phrog_18196 | unknown function | unknown function | -1 | 50796 | 51290 |
| AME18082.1 | KU204984_p56 | hypothetical protein | phrog_25659 | unknown function | unknown function | -1 | 44832 | 45095 |
| AME18077.1 | KU204984_p51 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 40039 | 41535 |
| AME18044.1 | KU204984_p19 | virion structural protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 17076 | 17477 |
| ANN44564.1 | KU204984_p35 | o-spanin | phrog_812 | Rz-like spanin | lysis | 1 | 31265 | 31627 |
| AME18086.1 | KU204984_p60 | hypothetical protein | phrog_14658 | unknown function | unknown function | -1 | 45877 | 46185 |
| ANN44562.1 | KU204984_p14 | hypothetical protein | singleton | unknown function | unknown function | -1 | 13892 | 14176 |
| AME18075.1 | KU204984_p49 | hypothetical protein | phrog_11422 | unknown function | unknown function | -1 | 38313 | 39308 |
| AME18099.1 | KU204984_p74 | hypothetical protein | phrog_54 | DksA-like zinc-finger protein | other | 1 | 55443 | 55697 |
| AME18040.1 | KU204984_p15 | major head protein | phrog_212 | major head protein | head and packaging | 1 | 14685 | 15614 |
| AME18064.1 | KU204984_p38 | hypothetical protein | phrog_17853 | unknown function | unknown function | -1 | 32350 | 32649 |
| AME18043.1 | KU204984_p18 | virion structural protein | phrog_161 | head closure Hc1 | connector | 1 | 16682 | 17074 |
| AME18097.1 | KU204984_p71 | primase/polymerase | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 51686 | 54022 |
| AME18079.1 | KU204984_p53 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 41719 | 43962 |
| AME18034.1 | KU204984_p9 | GTP cyclohydrolase II | phrog_1017 | unknown function | unknown function | -1 | 11302 | 11811 |
| AME18085.1 | KU204984_p59 | hypothetical protein | phrog_29767 | unknown function | unknown function | -1 | 45614 | 45832 |
| AME18042.1 | KU204984_p17 | virion structural protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 16164 | 16679 |