Genomic map of Gordonia phage Howe (KU252585)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
KU252585
Definition
Gordonia phage Howe, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
PVOG
Length
53182
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
65.6
Number of singletons
15
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ALY07646.1 KU252585_p12 major tail protein phrog_3884 major tail protein tail 1 7820 8341
ALY07692.1 KU252585_p58 HNH endonuclease phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41496 42002
ALY07693.1 KU252585_p59 hypothetical protein phrog_4171 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 41999 43018
ALY07684.1 KU252585_p50 hypothetical protein phrog_21001 unknown function unknown function 1 38326 38745
ALY07650.1 KU252585_p15 tail assembly chaperone phrog_3860 tail assembly chaperone tail 1 9045 9967
ALY07635.1 KU252585_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 14 346
ALY07704.1 KU252585_p70 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 47494 48747
ALY07651.1 KU252585_p17 hypothetical protein phrog_19756 unknown function unknown function -1 9933 10460
ALY07685.1 KU252585_p51 hypothetical protein phrog_7723 unknown function unknown function 1 38742 38969
ALY07711.1 KU252585_p77 hypothetical protein phrog_17450 unknown function unknown function 1 51606 52001
ALY07640.1 KU252585_p6 major capsid protein phrog_1650 major head protein head and packaging 1 4904 5836
ALY07709.1 KU252585_p75 hypothetical protein phrog_908 unknown function unknown function 1 50324 51061
ALY07649.1 KU252585_p16 tail assembly chaperone phrog_3860 tail assembly chaperone tail 1 9045 9698
ALY07677.1 KU252585_p43 hypothetical protein singleton unknown function unknown function -1 34334 34783
ALY07702.1 KU252585_p68 hypothetical protein singleton unknown function unknown function 1 46350 46568
ALY07667.1 KU252585_p33 hypothetical protein singleton unknown function unknown function -1 28712 28855
ALY07698.1 KU252585_p64 hypothetical protein phrog_7793 unknown function unknown function 1 44501 44614
ALY07660.1 KU252585_p26 hypothetical protein phrog_7719 minor tail protein tail 1 22619 23656
ALY07645.1 KU252585_p11 hypothetical protein phrog_2595 head-tail connector protein connector 1 7377 7817
ALY07642.1 KU252585_p8 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 6280 6651
ALY07639.1 KU252585_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4490 4900
ALY07657.1 KU252585_p23 hypothetical protein phrog_38409 unknown function unknown function 1 21098 21331
ALY07665.1 KU252585_p31 hypothetical protein singleton unknown function unknown function -1 26976 28301
ALY07658.1 KU252585_p24 hypothetical protein phrog_798 unknown function unknown function 1 21328 21834
ALY07670.1 KU252585_p36 integrase phrog_1 integrase integration and excision 1 30765 31682
ALY07675.1 KU252585_p41 hypothetical protein phrog_5316 unknown function unknown function -1 33654 33884
ALY07652.1 KU252585_p18 tape measure protein phrog_7025 tail length tape measure protein tail 1 10520 17068
ALY07655.1 KU252585_p21 minor tail protein phrog_2998 endolysin lysis 1 19524 20633
ALY07653.1 KU252585_p19 minor tail protein phrog_106 minor tail protein tail 1 17069 17905
ALY07668.1 KU252585_p34 XRE family transcriptional regulator phrog_2439 transcriptional regulator transcription regulation -1 28949 29995
ALY07706.1 KU252585_p72 hypothetical protein phrog_14446 unknown function unknown function 1 49160 49678
ALY07644.1 KU252585_p10 hypothetical protein phrog_556 minor head protein head and packaging 1 7051 7380
ALY07689.1 KU252585_p55 hypothetical protein phrog_1581 unknown function unknown function 1 40090 40332
ALY07679.1 KU252585_p45 immunity repressor phrog_6288 unknown function unknown function -1 35455 36354
ALY07647.1 KU252585_p13 hypothetical protein singleton unknown function unknown function 1 8341 8514
ALY07694.1 KU252585_p60 hypothetical protein phrog_32096 membrane protein moron, auxiliary metabolic gene and host takeover 1 43018 43305
ALY07703.1 KU252585_p69 hypothetical protein phrog_22834 unknown function unknown function 1 46565 47497
ALY07705.1 KU252585_p71 endonuclease phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 48762 49163
ALY07669.1 KU252585_p35 hypothetical protein singleton unknown function unknown function -1 29995 30615
ALY07683.1 KU252585_p49 HTH DNA binding protein phrog_63 anti-repressor Ant transcription regulation 1 37454 38329
ALY07707.1 KU252585_p73 hypothetical protein phrog_36536 unknown function unknown function 1 49672 49965
ALY07714.1 KU252585_p80 hypothetical protein phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 52736 53092
ALY07643.1 KU252585_p9 hypothetical protein phrog_3881 head-tail connector protein connector 1 6719 7039
ALY07701.1 KU252585_p67 hypothetical protein phrog_21138 unknown function unknown function 1 45757 46353
ALY07696.1 KU252585_p62 hypothetical protein singleton unknown function unknown function 1 44018 44236
ALY07687.1 KU252585_p53 hypothetical protein phrog_9213 unknown function unknown function 1 39241 39459
ALY07673.1 KU252585_p39 hypothetical protein phrog_34494 unknown function unknown function 1 32367 32549
ALY07637.1 KU252585_p3 portal protein phrog_113 portal protein head and packaging 1 1915 3219
ALY07708.1 KU252585_p74 hypothetical protein singleton unknown function unknown function 1 49962 50327
ALY07663.1 KU252585_p29 endolysin singleton unknown function unknown function 1 24492 25715
ALY07690.1 KU252585_p56 hypothetical protein phrog_2857 tail fiber protein tail 1 40329 40643
ALY07695.1 KU252585_p61 hypothetical protein phrog_19094 unknown function unknown function 1 43302 44021
ALY07678.1 KU252585_p44 antitoxin phrog_31673 unknown function unknown function -1 34780 35391
ALY07699.1 KU252585_p65 hypothetical protein phrog_1590 unknown function unknown function 1 44611 45450
ALY07638.1 KU252585_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3216 4487
ALY07664.1 KU252585_p30 hypothetical protein singleton unknown function unknown function -1 25712 26899
ALY07697.1 KU252585_p63 hypothetical protein singleton unknown function unknown function 1 44229 44504
ALY07636.1 KU252585_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 318 1901
ALY07666.1 KU252585_p32 hypothetical protein phrog_6153 unknown function unknown function -1 28453 28665
ALY07661.1 KU252585_p27 hypothetical protein phrog_24626 unknown function unknown function 1 23653 23889
ALY07676.1 KU252585_p42 hypothetical protein phrog_87 metallo-protease other -1 33877 34200
ALY07641.1 KU252585_p7 hypothetical protein phrog_2322 head-tail connector protein connector 1 5836 6276
ALY07672.1 KU252585_p38 hypothetical protein phrog_35716 unknown function unknown function 1 32003 32341
ALY07710.1 KU252585_p76 hypothetical protein phrog_9543 unknown function unknown function 1 51290 51619
ALY07654.1 KU252585_p20 minor tail protein phrog_110 minor tail protein tail 1 17902 19482
ALY07713.1 KU252585_p79 hypothetical protein phrog_3167 unknown function unknown function 1 52326 52736
ALY07662.1 KU252585_p28 hypothetical protein singleton unknown function unknown function 1 23889 24479
ALY07700.1 KU252585_p66 hypothetical protein phrog_10621 unknown function unknown function 1 45450 45644
ALY07680.1 KU252585_p46 transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 36582 36854
ALY07682.1 KU252585_p48 hypothetical protein singleton unknown function unknown function 1 37012 37398
ALY07686.1 KU252585_p52 hypothetical protein phrog_1840 excisionase integration and excision 1 38966 39244
ALY07648.1 KU252585_p14 hypothetical protein singleton unknown function unknown function -1 8596 8943
ALY07656.1 KU252585_p22 hypothetical protein phrog_31213 unknown function unknown function 1 20665 21045
ALY07691.1 KU252585_p57 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 40640 41503
ALY07712.1 KU252585_p78 hypothetical protein phrog_10381 unknown function unknown function 1 52001 52309
ALY07659.1 KU252585_p25 hypothetical protein phrog_102 endolysin lysis 1 21873 22619
ALY07681.1 KU252585_p47 hypothetical protein phrog_16839 unknown function unknown function 1 36854 37015
ALY07688.1 KU252585_p54 DNA methylase phrog_111 DNA methyltransferase other 1 39545 40093
ALY07671.1 KU252585_p37 hypothetical protein singleton unknown function unknown function 1 31679 31846
ALY07674.1 KU252585_p40 integrase phrog_1 integrase integration and excision 1 32549 33676